FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6592, 202 aa 1>>>pF1KE6592 202 - 202 aa - 202 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.9530+/-0.000701; mu= 8.3955+/- 0.043 mean_var=143.8532+/-28.503, 0's: 0 Z-trim(115.8): 5 B-trim: 148 in 1/54 Lambda= 0.106934 statistics sampled from 16370 (16372) to 16370 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.814), E-opt: 0.2 (0.503), width: 16 Scan time: 2.200 The best scores are: opt bits E(32554) CCDS12656.1 BLOC1S3 gene_id:388552|Hs108|chr19 ( 202) 1321 213.9 5.2e-56 >>CCDS12656.1 BLOC1S3 gene_id:388552|Hs108|chr19 (202 aa) initn: 1321 init1: 1321 opt: 1321 Z-score: 1119.0 bits: 213.9 E(32554): 5.2e-56 Smith-Waterman score: 1321; 100.0% identity (100.0% similar) in 202 aa overlap (1-202:1-202) 10 20 30 40 50 60 pF1KE6 MASQGRRRRPLRRPETVVPGEATETDSERSASSSEEEELYLGPSGPTRGRPTGLRVAGEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MASQGRRRRPLRRPETVVPGEATETDSERSASSSEEEELYLGPSGPTRGRPTGLRVAGEA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 AETDSEPEPEPEPTAAPRDLPPLVVQRESAEEAWGTEEAPAPAPARSLLQLRLAESQARL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 AETDSEPEPEPEPTAAPRDLPPLVVQRESAEEAWGTEEAPAPAPARSLLQLRLAESQARL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 DHDVAAAVSGVYRRAGRDVAALASRLAAAQAAGLAAAHSVRLARGDLCALAERLDIVAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 DHDVAAAVSGVYRRAGRDVAALASRLAAAQAAGLAAAHSVRLARGDLCALAERLDIVAGC 130 140 150 160 170 180 190 200 pF1KE6 RLLPDIRGVPGTEPEKDPGPRA :::::::::::::::::::::: CCDS12 RLLPDIRGVPGTEPEKDPGPRA 190 200 202 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:38:44 2016 done: Tue Nov 8 14:38:44 2016 Total Scan time: 2.200 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]