FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2282, 131 aa 1>>>pF1KE2282 131 - 131 aa - 131 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1278+/-0.00062; mu= 13.5685+/- 0.038 mean_var=77.1621+/-15.190, 0's: 0 Z-trim(112.8): 7 B-trim: 0 in 0/52 Lambda= 0.146007 statistics sampled from 13506 (13511) to 13506 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.79), E-opt: 0.2 (0.415), width: 16 Scan time: 1.790 The best scores are: opt bits E(32554) CCDS12654.1 GEMIN7 gene_id:79760|Hs108|chr19 ( 131) 874 192.1 8e-50 >>CCDS12654.1 GEMIN7 gene_id:79760|Hs108|chr19 (131 aa) initn: 874 init1: 874 opt: 874 Z-score: 1007.9 bits: 192.1 E(32554): 8e-50 Smith-Waterman score: 874; 100.0% identity (100.0% similar) in 131 aa overlap (1-131:1-131) 10 20 30 40 50 60 pF1KE2 MQTPVNIPVPVLRLPRGPDGFSRGFAPDGRRAPLRPEVPEIQECPIAQESLESQEQRARA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MQTPVNIPVPVLRLPRGPDGFSRGFAPDGRRAPLRPEVPEIQECPIAQESLESQEQRARA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 ALRERYLRSLLAMVGHQVSFTLHEGVRVAAHFGATDLDVANFYVSQLQTPIGVQAEALLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 ALRERYLRSLLAMVGHQVSFTLHEGVRVAAHFGATDLDVANFYVSQLQTPIGVQAEALLR 70 80 90 100 110 120 130 pF1KE2 CSDIISYTFKP ::::::::::: CCDS12 CSDIISYTFKP 130 131 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 13:21:16 2016 done: Sun Nov 6 13:21:16 2016 Total Scan time: 1.790 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]