(Linear) (Six-base) MAPSORT of: KIBB0426.seq Check: 1322 from: 1 to: 2535 KIBB0426.orf With 182 enzymes: SgfI * July 15, 2010 18:29 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 250 2535 Size: 250 2285 Acc65I G'GTAC_C Cuts at: 0 1612 2535 Size: 1612 923 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1358 2535 Size: 1358 1177 AfeI AGC'GCT Cuts at: 0 583 2535 Size: 583 1952 AflII C'TTAA_G Cuts at: 0 214 2535 Size: 214 2321 AflIII A'CryG_T Cuts at: 0 1406 2535 Size: 1406 1129 AleI CACnn'nnGTG Cuts at: 0 1237 2535 Size: 1237 1298 AlwNI CAG_nnn'CTG Cuts at: 0 207 1026 1188 1602 1995 2535 Size: 207 819 162 414 393 540 Fragments arranged by size: 819 540 414 393 207 162 ApoI r'AATT_y Cuts at: 0 2110 2535 Size: 2110 425 AvaI C'yCGr_G Cuts at: 0 899 2384 2535 Size: 899 1485 151 Fragments arranged by size: 1485 899 151 BanI G'GyrC_C Cuts at: 0 11 775 981 1432 1612 1643 2535 Size: 11 764 206 451 180 31 892 Fragments arranged by size: 892 764 451 206 180 31 11 BanII G_rGCy'C Cuts at: 0 84 278 545 643 1752 1880 2535 Size: 84 194 267 98 1109 128 655 Fragments arranged by size: 1109 655 267 194 128 98 84 BbeI G_GCGC'C Cuts at: 0 15 2535 Size: 15 2520 BbsI GAAGACnn'nnnn_ Cuts at: 0 422 798 2535 Size: 422 376 1737 Fragments arranged by size: 1737 422 376 BbvCI CC'TCA_GC Cuts at: 0 1889 2535 Size: 1889 646 BglI GCCn_nnn'nGGC Cuts at: 0 2486 2535 Size: 2486 49 BglII A'GATC_T Cuts at: 0 515 2471 2535 Size: 515 1956 64 Fragments arranged by size: 1956 515 64 Bme1580I G_kGCm'C Cuts at: 0 778 1437 2535 Size: 778 659 1098 Fragments arranged by size: 1098 778 659 BmgBI CAC'GTC Cuts at: 0 909 2535 Size: 909 1626 BmrI ACTGGGnnnn_n' Cuts at: 0 195 2535 Size: 195 2340 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 1700 2535 Size: 1700 835 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 943 1003 1850 1883 2535 Size: 943 60 847 33 652 Fragments arranged by size: 943 847 652 60 33 Bpu10I CC'TnA_GC Cuts at: 0 83 1751 1889 2535 Size: 83 1668 138 646 Fragments arranged by size: 1668 646 138 83 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 247 674 1210 1312 2392 2535 Size: 247 427 536 102 1080 143 Fragments arranged by size: 1080 536 427 247 143 102 BsaI GGTCTCn'nnnn_ Cuts at: 0 1373 1567 2381 2535 Size: 1373 194 814 154 Fragments arranged by size: 1373 814 194 154 BsaAI yAC'GTr Cuts at: 0 2508 2535 Size: 2508 27 BsaBI GATnn'nnATC Cuts at: 0 1504 2535 Size: 1504 1031 BsaHI Gr'CG_yC Cuts at: 0 12 2535 Size: 12 2523 BsaWI w'CCGG_w Cuts at: 0 1521 2180 2535 Size: 1521 659 355 Fragments arranged by size: 1521 659 355 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 532 562 607 637 1856 1886 2535 Size: 532 30 45 30 1219 30 649 Fragments arranged by size: 1219 649 532 45 30 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 409 412 475 511 631 1585 1976 2535 Size: 409 3 63 36 120 954 391 559 Fragments arranged by size: 954 559 409 391 120 63 36 3 BseYI C'CCAG_C Cuts at: 0 55 636 1773 2535 Size: 55 581 1137 762 Fragments arranged by size: 1137 762 581 55 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 325 931 1330 1640 2535 Size: 325 606 399 310 895 Fragments arranged by size: 895 606 399 325 310 BsiEI CG_ry'CG Cuts at: 0 359 2535 Size: 359 2176 BsiHKAI G_wGCw'C Cuts at: 0 278 1880 2535 Size: 278 1602 655 Fragments arranged by size: 1602 655 278 BsmI GAATG_Cn' Cuts at: 0 1533 2535 Size: 1533 1002 Bsp1286I G_dGCh'C Cuts at: 0 84 278 545 643 778 1437 1752 1880 Size: 84 194 267 98 135 659 315 128 Cuts at: 1880 2535 Size: 655 Fragments arranged by size: 659 655 315 267 194 135 128 98 84 BspEI T'CCGG_A Cuts at: 0 1521 2535 Size: 1521 1014 BspHI T'CATG_A Cuts at: 0 2159 2535 Size: 2159 376 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 155 176 191 250 734 980 1073 1352 Size: 155 21 15 59 484 246 93 279 Cuts at: 1352 2535 Size: 1183 Fragments arranged by size: 1183 484 279 246 155 93 59 21 15 BsrBI CCG'CTC Cuts at: 0 2031 2063 2535 Size: 2031 32 472 Fragments arranged by size: 2031 472 32 BsrFI r'CCGG_y Cuts at: 0 1202 2535 Size: 1202 1333 BstAPI GCAn_nnn'nTGC Cuts at: 0 2113 2535 Size: 2113 422 BstBI TT'CG_AA Cuts at: 0 281 2535 Size: 281 2254 BstXI CCAn_nnnn'nTGG Cuts at: 0 2508 2535 Size: 2508 27 BstYI r'GATC_y Cuts at: 0 515 602 2429 2471 2535 Size: 515 87 1827 42 64 Fragments arranged by size: 1827 515 87 64 42 Bsu36I CC'TnA_GG Cuts at: 0 1988 2535 Size: 1988 547 BtgI C'CryG_G Cuts at: 0 1977 2024 2535 Size: 1977 47 511 Fragments arranged by size: 1977 511 47 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 1063 1726 2535 Size: 1063 663 809 Fragments arranged by size: 1063 809 663 BtsI GCAGTG_nn' Cuts at: 0 1135 2336 2535 Size: 1135 1201 199 Fragments arranged by size: 1201 1135 199 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 0 2440 2475 2535 Size: 2440 35 60 Fragments arranged by size: 2440 60 35 DraIII CAC_nnn'GTG Cuts at: 0 66 2535 Size: 66 2469 EaeI y'GGCC_r Cuts at: 0 840 890 1200 1502 1692 2054 2478 2535 Size: 840 50 310 302 190 362 424 57 Fragments arranged by size: 840 424 362 310 302 190 57 50 EarI CTCTTCn'nnn_ Cuts at: 0 283 301 1377 2535 Size: 283 18 1076 1158 Fragments arranged by size: 1158 1076 283 18 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 517 2535 Size: 517 2018 EcoICRI GAG'CTC Cuts at: 0 276 1878 2535 Size: 276 1602 657 Fragments arranged by size: 1602 657 276 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 943 1003 1358 1850 1883 2535 Size: 943 60 355 492 33 652 Fragments arranged by size: 943 652 492 355 60 33 EcoNI CCTnn'n_nnAGG Cuts at: 0 172 1018 1420 2535 Size: 172 846 402 1115 Fragments arranged by size: 1115 846 402 172 EcoO109I rG'GnC_Cy Cuts at: 0 105 471 525 723 969 1092 1680 1992 Size: 105 366 54 198 246 123 588 312 Cuts at: 1992 2020 2535 Size: 28 515 Fragments arranged by size: 588 515 366 312 246 198 123 105 54 28 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 2274 2535 Size: 2274 261 FseI GG_CCGG'CC Cuts at: 0 1206 2535 Size: 1206 1329 HaeII r_GCGC'y Cuts at: 0 15 585 1251 2535 Size: 15 570 666 1284 Fragments arranged by size: 1284 666 570 15 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 532 564 1564 1596 2456 2488 2535 Size: 532 32 1000 32 860 32 47 Fragments arranged by size: 1000 860 532 47 32 32 32 HincII GTy'rAC Cuts at: 0 180 2535 Size: 180 2355 KasI G'GCGC_C Cuts at: 0 11 2535 Size: 11 2524 KpnI G_GTAC'C Cuts at: 0 1616 2535 Size: 1616 919 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 461 1535 2535 Size: 461 1074 1000 Fragments arranged by size: 1074 1000 461 MscI TGG'CCA Cuts at: 0 1504 2056 2535 Size: 1504 552 479 Fragments arranged by size: 1504 552 479 MslI CAynn'nnrTG Cuts at: 0 1237 2535 Size: 1237 1298 MspA1I CmG'CkG Cuts at: 0 135 1161 1634 2535 Size: 135 1026 473 901 Fragments arranged by size: 1026 901 473 135 NaeI GCC'GGC Cuts at: 0 1204 2535 Size: 1204 1331 NarI GG'CG_CC Cuts at: 0 12 2535 Size: 12 2523 NcoI C'CATG_G Cuts at: 0 1977 2024 2535 Size: 1977 47 511 Fragments arranged by size: 1977 511 47 NgoMIV G'CCGG_C Cuts at: 0 1202 2535 Size: 1202 1333 NspI r_CATG'y Cuts at: 0 1410 2535 Size: 1410 1125 PasI CC'CwG_GG Cuts at: 0 771 1437 2535 Size: 771 666 1098 Fragments arranged by size: 1098 771 666 PciI A'CATG_T Cuts at: 0 1406 2535 Size: 1406 1129 PflMI CCAn_nnn'nTGG Cuts at: 0 1026 1188 1828 2535 Size: 1026 162 640 707 Fragments arranged by size: 1026 707 640 162 PfoI T'CCnGG_A Cuts at: 0 110 346 1019 2535 Size: 110 236 673 1516 Fragments arranged by size: 1516 673 236 110 PpuMI rG'GwC_Cy Cuts at: 0 471 525 723 969 1092 1680 1992 2535 Size: 471 54 198 246 123 588 312 543 Fragments arranged by size: 588 543 471 312 246 198 123 54 PstI C_TGCA'G Cuts at: 0 853 2535 Size: 853 1682 PvuI CG_AT'CG Cuts at: 0 359 2535 Size: 359 2176 PvuII CAG'CTG Cuts at: 0 135 1161 2535 Size: 135 1026 1374 Fragments arranged by size: 1374 1026 135 SacI G_AGCT'C Cuts at: 0 278 1880 2535 Size: 278 1602 655 Fragments arranged by size: 1602 655 278 SanDI GG'GwC_CC Cuts at: 0 1680 2535 Size: 1680 855 SapI GCTCTTCn'nnn_ Cuts at: 0 283 2535 Size: 283 2252 SexAI A'CCwGG_T Cuts at: 0 800 2535 Size: 800 1735 SfcI C'TryA_G Cuts at: 0 423 849 2535 Size: 423 426 1686 Fragments arranged by size: 1686 426 423 SfoI GGC'GCC Cuts at: 0 13 2535 Size: 13 2522 SmaI CCC'GGG Cuts at: 0 901 2535 Size: 901 1634 SmlI C'TyrA_G Cuts at: 0 214 262 689 1225 1327 2407 2535 Size: 214 48 427 536 102 1080 128 Fragments arranged by size: 1080 536 427 214 128 102 48 StuI AGG'CCT Cuts at: 0 1591 2535 Size: 1591 944 StyI C'CwwG_G Cuts at: 0 1428 1977 2024 2535 Size: 1428 549 47 511 Fragments arranged by size: 1428 549 511 47 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 37 1397 2405 2535 Size: 37 1360 1008 130 Fragments arranged by size: 1360 1008 130 37 TatI w'GTAC_w Cuts at: 0 623 2535 Size: 623 1912 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 1856 1888 2535 Size: 1856 32 647 Fragments arranged by size: 1856 647 32 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 876 1092 1173 2535 Size: 876 216 81 1362 Fragments arranged by size: 1362 876 216 81 XmaI C'CCGG_G Cuts at: 0 899 2535 Size: 899 1636 Enzymes that do cut: AarI Acc65I AcuI AfeI AflII AflIII AleI AlwNI ApoI AvaI BanI BanII BbeI BbsI BbvCI BglI BglII Bme1580I BmgBI BmrI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI Bsp1286I BspEI BspHI BspMI BsrBI BsrFI BstAPI BstBI BstXI BstYI Bsu36I BtgI BtgZI BtsI CspCI DraIII EaeI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I FalI FseI HaeII Hin4I HincII KasI KpnI MmeI MscI MslI MspA1I NaeI NarI NcoI NgoMIV NspI PasI PciI PflMI PfoI PpuMI PstI PvuI PvuII SacI SanDI SapI SexAI SfcI SfoI SmaI SmlI StuI StyI TaqII TatI TstI XcmI XmaI Enzymes that do not cut: AatII AccI AclI AgeI AhdI AlfI AloI ApaI ApaLI AscI AseI AsiSI AvrII BaeI BamHI BcgI BciVI BclI BfrBI BlpI BmtI BsiWI BsmBI BsrDI BsrGI BssHII BssSI BstEII BstZ17I ClaI DraI DrdI EagI EcoRI EcoRV FspI FspAI HindIII HpaI MfeI MluI NdeI NheI NotI NruI NsiI PacI PmeI PmlI PpiI PshAI PsiI PspOMI PspXI PsrI RsrII SacII SalI SbfI ScaI SfiI SgfI SgrAI SnaBI SpeI SphI SrfI SspI SwaI Tth111I XbaI XhoI XmnI ZraI