FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3801, 69 aa 1>>>pF1KE3801 69 - 69 aa - 69 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1823+/-0.000248; mu= 8.1654+/- 0.016 mean_var=60.6035+/-12.004, 0's: 0 Z-trim(121.4): 31 B-trim: 2181 in 1/54 Lambda= 0.164750 statistics sampled from 37884 (37915) to 37884 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.828), E-opt: 0.2 (0.445), width: 16 Scan time: 3.690 The best scores are: opt bits E(85289) NP_001185685 (OMIM: 139391) guanine nucleotide-bin ( 69) 448 113.5 2.7e-26 NP_001185683 (OMIM: 139391) guanine nucleotide-bin ( 69) 448 113.5 2.7e-26 NP_001185684 (OMIM: 139391) guanine nucleotide-bin ( 69) 448 113.5 2.7e-26 NP_113686 (OMIM: 139391) guanine nucleotide-bindin ( 69) 448 113.5 2.7e-26 NP_004117 (OMIM: 604390) guanine nucleotide-bindin ( 73) 299 78.1 1.3e-15 NP_001316355 (OMIM: 189970) guanine nucleotide-bin ( 74) 294 77.0 3e-15 NP_068774 (OMIM: 189970) guanine nucleotide-bindin ( 74) 294 77.0 3e-15 XP_016882095 (OMIM: 604430) PREDICTED: guanine nuc ( 68) 175 48.7 9e-07 NP_443079 (OMIM: 604430) guanine nucleotide-bindin ( 68) 175 48.7 9e-07 NP_061329 (OMIM: 615405) guanine nucleotide-bindin ( 72) 167 46.8 3.5e-06 XP_016857298 (OMIM: 615405) PREDICTED: guanine nuc ( 72) 167 46.8 3.5e-06 XP_016857300 (OMIM: 615405) PREDICTED: guanine nuc ( 72) 167 46.8 3.5e-06 XP_016857299 (OMIM: 615405) PREDICTED: guanine nuc ( 72) 167 46.8 3.5e-06 XP_016876866 (OMIM: 606981) PREDICTED: guanine nuc ( 71) 157 44.4 1.8e-05 XP_011535148 (OMIM: 606981) PREDICTED: guanine nuc ( 71) 157 44.4 1.8e-05 NP_444292 (OMIM: 606981) guanine nucleotide-bindin ( 71) 157 44.4 1.8e-05 XP_006720236 (OMIM: 606981) PREDICTED: guanine nuc ( 71) 157 44.4 1.8e-05 NP_001230703 (OMIM: 606981) guanine nucleotide-bin ( 71) 157 44.4 1.8e-05 NP_001230702 (OMIM: 606981) guanine nucleotide-bin ( 71) 157 44.4 1.8e-05 XP_016876865 (OMIM: 606981) PREDICTED: guanine nuc ( 71) 157 44.4 1.8e-05 NP_036334 (OMIM: 608941) guanine nucleotide-bindin ( 75) 148 42.3 8.4e-05 XP_006718563 (OMIM: 608941) PREDICTED: guanine nuc ( 75) 148 42.3 8.4e-05 NP_001017998 (OMIM: 604389) guanine nucleotide-bin ( 68) 147 42.0 9.1e-05 NP_001185593 (OMIM: 604389) guanine nucleotide-bin ( 68) 147 42.0 9.1e-05 NP_001092191 (OMIM: 604388) guanine nucleotide-bin ( 75) 138 39.9 0.00044 XP_006711824 (OMIM: 604388) PREDICTED: guanine nuc ( 75) 138 39.9 0.00044 NP_001092192 (OMIM: 604388) guanine nucleotide-bin ( 75) 138 39.9 0.00044 NP_004476 (OMIM: 604388) guanine nucleotide-bindin ( 75) 138 39.9 0.00044 XP_011542469 (OMIM: 604388) PREDICTED: guanine nuc ( 75) 138 39.9 0.00044 NP_005265 (OMIM: 600874) guanine nucleotide-bindin ( 68) 131 38.2 0.0013 >>NP_001185685 (OMIM: 139391) guanine nucleotide-binding (69 aa) initn: 448 init1: 448 opt: 448 Z-score: 593.1 bits: 113.5 E(85289): 2.7e-26 Smith-Waterman score: 448; 100.0% identity (100.0% similar) in 69 aa overlap (1-69:1-69) 10 20 30 40 50 60 pF1KE3 MAQDLSEKDLLKMEVEQLKKEVKNTRIPISKAGKEIKEYVEAQAGNDPFLKGIPEDKNPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAQDLSEKDLLKMEVEQLKKEVKNTRIPISKAGKEIKEYVEAQAGNDPFLKGIPEDKNPF 10 20 30 40 50 60 pF1KE3 KEKGGCLIS ::::::::: NP_001 KEKGGCLIS >>NP_001185683 (OMIM: 139391) guanine nucleotide-binding (69 aa) initn: 448 init1: 448 opt: 448 Z-score: 593.1 bits: 113.5 E(85289): 2.7e-26 Smith-Waterman score: 448; 100.0% identity (100.0% similar) in 69 aa overlap (1-69:1-69) 10 20 30 40 50 60 pF1KE3 MAQDLSEKDLLKMEVEQLKKEVKNTRIPISKAGKEIKEYVEAQAGNDPFLKGIPEDKNPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAQDLSEKDLLKMEVEQLKKEVKNTRIPISKAGKEIKEYVEAQAGNDPFLKGIPEDKNPF 10 20 30 40 50 60 pF1KE3 KEKGGCLIS ::::::::: NP_001 KEKGGCLIS >>NP_001185684 (OMIM: 139391) guanine nucleotide-binding (69 aa) initn: 448 init1: 448 opt: 448 Z-score: 593.1 bits: 113.5 E(85289): 2.7e-26 Smith-Waterman score: 448; 100.0% identity (100.0% similar) in 69 aa overlap (1-69:1-69) 10 20 30 40 50 60 pF1KE3 MAQDLSEKDLLKMEVEQLKKEVKNTRIPISKAGKEIKEYVEAQAGNDPFLKGIPEDKNPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAQDLSEKDLLKMEVEQLKKEVKNTRIPISKAGKEIKEYVEAQAGNDPFLKGIPEDKNPF 10 20 30 40 50 60 pF1KE3 KEKGGCLIS ::::::::: NP_001 KEKGGCLIS >>NP_113686 (OMIM: 139391) guanine nucleotide-binding pr (69 aa) initn: 448 init1: 448 opt: 448 Z-score: 593.1 bits: 113.5 E(85289): 2.7e-26 Smith-Waterman score: 448; 100.0% identity (100.0% similar) in 69 aa overlap (1-69:1-69) 10 20 30 40 50 60 pF1KE3 MAQDLSEKDLLKMEVEQLKKEVKNTRIPISKAGKEIKEYVEAQAGNDPFLKGIPEDKNPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_113 MAQDLSEKDLLKMEVEQLKKEVKNTRIPISKAGKEIKEYVEAQAGNDPFLKGIPEDKNPF 10 20 30 40 50 60 pF1KE3 KEKGGCLIS ::::::::: NP_113 KEKGGCLIS >>NP_004117 (OMIM: 604390) guanine nucleotide-binding pr (73 aa) initn: 299 init1: 299 opt: 299 Z-score: 401.4 bits: 78.1 E(85289): 1.3e-15 Smith-Waterman score: 299; 65.7% identity (88.1% similar) in 67 aa overlap (3-69:7-73) 10 20 30 40 50 pF1KE3 MAQDLSEKDLLKMEVEQLKKEVKNTRIPISKAGKEIKEYVEAQAGNDPFLKGIPED .:: ::. ::::::::.:::: : .:: ..:::.:.: ..:.::..:::::: NP_004 MPALHIEDLPEKEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPED 10 20 30 40 50 60 60 pF1KE3 KNPFKEKGGCLIS ::::::::.:.:: NP_004 KNPFKEKGSCVIS 70 >>NP_001316355 (OMIM: 189970) guanine nucleotide-binding (74 aa) initn: 292 init1: 260 opt: 294 Z-score: 394.8 bits: 77.0 E(85289): 3e-15 Smith-Waterman score: 294; 64.7% identity (86.8% similar) in 68 aa overlap (3-69:7-74) 10 20 30 40 50 pF1KE3 MAQDLSEKDLLKMEVEQLKKEVKNTRIPISKAGKEIKEYVEAQAGNDPFLKGIPED .::.::: :::::.:::::: :. .:: .:...::: ..:.::..:::::: NP_001 MPVINIEDLTEKDKLKMEVDQLKKEVTLERMLVSKCCEEVRDYVEERSGEDPLVKGIPED 10 20 30 40 50 60 60 pF1KE3 KNPFKE-KGGCLIS :::::: ::::.:: NP_001 KNPFKELKGGCVIS 70 >>NP_068774 (OMIM: 189970) guanine nucleotide-binding pr (74 aa) initn: 292 init1: 260 opt: 294 Z-score: 394.8 bits: 77.0 E(85289): 3e-15 Smith-Waterman score: 294; 64.7% identity (86.8% similar) in 68 aa overlap (3-69:7-74) 10 20 30 40 50 pF1KE3 MAQDLSEKDLLKMEVEQLKKEVKNTRIPISKAGKEIKEYVEAQAGNDPFLKGIPED .::.::: :::::.:::::: :. .:: .:...::: ..:.::..:::::: NP_068 MPVINIEDLTEKDKLKMEVDQLKKEVTLERMLVSKCCEEVRDYVEERSGEDPLVKGIPED 10 20 30 40 50 60 60 pF1KE3 KNPFKE-KGGCLIS :::::: ::::.:: NP_068 KNPFKELKGGCVIS 70 >>XP_016882095 (OMIM: 604430) PREDICTED: guanine nucleot (68 aa) initn: 197 init1: 175 opt: 175 Z-score: 242.5 bits: 48.7 E(85289): 9e-07 Smith-Waterman score: 175; 48.1% identity (74.1% similar) in 54 aa overlap (15-68:14-67) 10 20 30 40 50 60 pF1KE3 MAQDLSEKDLLKMEVEQLKKEVKNTRIPISKAGKEIKEYVEAQAGNDPFLKGIPEDKNPF ::::. :. :: .:::.... : : .: :::.: :.: ..::: XP_016 MSATNNIAQARKLVEQLRIEAGIERIKVSKAASDLMSYCEQHARNDPLLVGVPASENPF 10 20 30 40 50 pF1KE3 KEKGGCLIS :.: :.: XP_016 KDKKPCIIL 60 >>NP_443079 (OMIM: 604430) guanine nucleotide-binding pr (68 aa) initn: 197 init1: 175 opt: 175 Z-score: 242.5 bits: 48.7 E(85289): 9e-07 Smith-Waterman score: 175; 48.1% identity (74.1% similar) in 54 aa overlap (15-68:14-67) 10 20 30 40 50 60 pF1KE3 MAQDLSEKDLLKMEVEQLKKEVKNTRIPISKAGKEIKEYVEAQAGNDPFLKGIPEDKNPF ::::. :. :: .:::.... : : .: :::.: :.: ..::: NP_443 MSATNNIAQARKLVEQLRIEAGIERIKVSKAASDLMSYCEQHARNDPLLVGVPASENPF 10 20 30 40 50 pF1KE3 KEKGGCLIS :.: :.: NP_443 KDKKPCIIL 60 >>NP_061329 (OMIM: 615405) guanine nucleotide-binding pr (72 aa) initn: 178 init1: 160 opt: 167 Z-score: 231.9 bits: 46.8 E(85289): 3.5e-06 Smith-Waterman score: 167; 46.3% identity (74.1% similar) in 54 aa overlap (15-68:18-71) 10 20 30 40 50 pF1KE3 MAQDLSEKDLLKMEVEQLKKEVKNTRIPISKAGKEIKEYVEAQAGNDPFLKGIPEDK :.::. :.. :: .:::. .. : : .: .::.: ::: .. NP_061 MSSKTASTNNIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSE 10 20 30 40 50 60 60 pF1KE3 NPFKEKGGCLIS ::::.: :.: NP_061 NPFKDKKTCIIL 70 69 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 06:38:41 2016 done: Sun Nov 6 06:38:42 2016 Total Scan time: 3.690 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]