FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1582, 89 aa 1>>>pF1KE1582 89 - 89 aa - 89 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.6472+/-0.000526; mu= 12.5889+/- 0.032 mean_var=58.2072+/-11.365, 0's: 0 Z-trim(113.6): 52 B-trim: 24 in 1/53 Lambda= 0.168107 statistics sampled from 14173 (14226) to 14173 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.814), E-opt: 0.2 (0.437), width: 16 Scan time: 1.320 The best scores are: opt bits E(32554) CCDS11306.1 CCL18 gene_id:6362|Hs108|chr17 ( 89) 616 156.3 2.4e-39 CCDS11307.1 CCL3 gene_id:6348|Hs108|chr17 ( 92) 375 97.8 9.5e-22 CCDS32626.1 CCL3L3 gene_id:414062|Hs108|chr17 ( 93) 371 96.9 1.9e-21 CCDS11308.1 CCL4 gene_id:6351|Hs108|chr17 ( 92) 283 75.5 4.9e-15 CCDS32624.1 CCL14 gene_id:6358|Hs108|chr17 ( 93) 271 72.6 3.8e-14 CCDS45652.1 CCL14 gene_id:6358|Hs108|chr17 ( 109) 267 71.7 8.3e-14 CCDS32627.2 CCL4L2 gene_id:9560|Hs108|chr17 ( 87) 258 69.4 3.2e-13 CCDS11300.1 CCL5 gene_id:6352|Hs108|chr17 ( 91) 246 66.5 2.5e-12 >>CCDS11306.1 CCL18 gene_id:6362|Hs108|chr17 (89 aa) initn: 616 init1: 616 opt: 616 Z-score: 820.0 bits: 156.3 E(32554): 2.4e-39 Smith-Waterman score: 616; 100.0% identity (100.0% similar) in 89 aa overlap (1-89:1-89) 10 20 30 40 50 60 pF1KE1 MKGLAAALLVLVCTMALCSCAQVGTNKELCCLVYTSWQIPQKFIVDYSETSPQCPKPGVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MKGLAAALLVLVCTMALCSCAQVGTNKELCCLVYTSWQIPQKFIVDYSETSPQCPKPGVI 10 20 30 40 50 60 70 80 pF1KE1 LLTKRGRQICADPNKKWVQKYISDLKLNA ::::::::::::::::::::::::::::: CCDS11 LLTKRGRQICADPNKKWVQKYISDLKLNA 70 80 >>CCDS11307.1 CCL3 gene_id:6348|Hs108|chr17 (92 aa) initn: 387 init1: 319 opt: 375 Z-score: 503.9 bits: 97.8 E(32554): 9.5e-22 Smith-Waterman score: 375; 60.9% identity (81.5% similar) in 92 aa overlap (1-89:1-92) 10 20 30 40 50 pF1KE1 MKGLAAALLVLVCTMALC---SCAQVGTNKELCCLVYTSWQIPQKFIVDYSETSPQCPKP :. .::: ::.:::::: : . .. . ::. ::: ::::.::.:: ::: :: :: CCDS11 MQVSTAALAVLLCTMALCNQFSASLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSKP 10 20 30 40 50 60 60 70 80 pF1KE1 GVILLTKRGRQICADPNKKWVQKYISDLKLNA :::.::::.::.::::...:::::.:::.:.: CCDS11 GVIFLTKRSRQVCADPSEEWVQKYVSDLELSA 70 80 90 >>CCDS32626.1 CCL3L3 gene_id:414062|Hs108|chr17 (93 aa) initn: 394 init1: 319 opt: 371 Z-score: 498.6 bits: 96.9 E(32554): 1.9e-21 Smith-Waterman score: 371; 60.2% identity (79.6% similar) in 93 aa overlap (1-89:1-93) 10 20 30 40 50 pF1KE1 MKGLAAALLVLVCTMALC----SCAQVGTNKELCCLVYTSWQIPQKFIVDYSETSPQCPK :. .::: ::.:::::: : .. . ::. ::: ::::.::.:: ::: :: : CCDS32 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK 10 20 30 40 50 60 60 70 80 pF1KE1 PGVILLTKRGRQICADPNKKWVQKYISDLKLNA :.::.:::::::.::::...:::::.:::.:.: CCDS32 PSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA 70 80 90 >>CCDS11308.1 CCL4 gene_id:6351|Hs108|chr17 (92 aa) initn: 295 init1: 261 opt: 283 Z-score: 383.3 bits: 75.5 E(32554): 4.9e-15 Smith-Waterman score: 283; 43.5% identity (76.1% similar) in 92 aa overlap (1-88:1-92) 10 20 30 40 50 pF1KE1 MKGLAAALLVLVCTMALCS---CAQVGTNKEL-CCLVYTSWQIPQKFIVDYSETSPQCPK :: ...: .:. . :.:: : .:.. ::. ::. ..:..:.::: ::: : . CCDS11 MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ 10 20 30 40 50 60 60 70 80 pF1KE1 PGVILLTKRGRQICADPNKKWVQKYISDLKLNA :.:.. :::..:.::::...:::.:. ::.:: CCDS11 PAVVFQTKRSKQVCADPSESWVQEYVYDLELN 70 80 90 >>CCDS32624.1 CCL14 gene_id:6358|Hs108|chr17 (93 aa) initn: 290 init1: 267 opt: 271 Z-score: 367.6 bits: 72.6 E(32554): 3.8e-14 Smith-Waterman score: 271; 41.9% identity (76.3% similar) in 93 aa overlap (1-88:1-93) 10 20 30 40 50 pF1KE1 MK-GLAAALLVLVCTMALCSCAQVGT----NKELCCLVYTSWQIPQKFIVDYSETSPQCP :: ..:: . :. :.:: . .. .. . ::..::...::.. :.:: ::. :: CCDS32 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCS 10 20 30 40 50 60 60 70 80 pF1KE1 KPGVILLTKRGRQICADPNKKWVQKYISDLKLNA :::....::::...:..:. :::: ::.:.: : CCDS32 KPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN 70 80 90 >>CCDS45652.1 CCL14 gene_id:6358|Hs108|chr17 (109 aa) initn: 290 init1: 267 opt: 267 Z-score: 361.3 bits: 71.7 E(32554): 8.3e-14 Smith-Waterman score: 267; 52.5% identity (88.1% similar) in 59 aa overlap (30-88:51-109) 10 20 30 40 50 pF1KE1 MKGLAAALLVLVCTMALCSCAQVGTNKELCCLVYTSWQIPQKFIVDYSETSPQCPKPGV ::..::...::.. :.:: ::. :: :::. CCDS45 KTESSSQTGGKPKVVKIQLKLVGGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCSKPGI 30 40 50 60 70 80 60 70 80 pF1KE1 ILLTKRGRQICADPNKKWVQKYISDLKLNA ...::::...:..:. :::: ::.:.: : CCDS45 VFITKRGHSVCTNPSDKWVQDYIKDMKEN 90 100 >>CCDS32627.2 CCL4L2 gene_id:9560|Hs108|chr17 (87 aa) initn: 280 init1: 128 opt: 258 Z-score: 350.9 bits: 69.4 E(32554): 3.2e-13 Smith-Waterman score: 258; 42.4% identity (71.7% similar) in 92 aa overlap (1-88:1-87) 10 20 30 40 50 pF1KE1 MKGLAAALLVLVCTMALCS---CAQVGTNKEL-CCLVYTSWQIPQKFIVDYSETSPQCPK :: ...: .:: . :.:: : .:.. ::. ::. ..:..:.::: ::: : . CCDS32 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ 10 20 30 40 50 60 60 70 80 pF1KE1 PGVILLTKRGRQICADPNKKWVQKYISDLKLNA :.:. :.:.::::...:::.:. ::.:: CCDS32 PAVV-----GKQVCADPSESWVQEYVYDLELN 70 80 >>CCDS11300.1 CCL5 gene_id:6352|Hs108|chr17 (91 aa) initn: 249 init1: 209 opt: 246 Z-score: 334.9 bits: 66.5 E(32554): 2.5e-12 Smith-Waterman score: 246; 38.5% identity (73.6% similar) in 91 aa overlap (1-88:1-91) 10 20 30 40 50 pF1KE1 MKGLAAALLVLVCTMALC---SCAQVGTNKELCCLVYTSWQIPQKFIVDYSETSPQCPKP :: :::: :.. . ::: : . ... ::..: . .:. : .: :: .: .: CCDS11 MKVSAAALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEYFYTSGKCSNP 10 20 30 40 50 60 60 70 80 pF1KE1 GVILLTKRGRQICADPNKKWVQKYISDLKLNA .:...:...::.::.:.::::..::..:... CCDS11 AVVFVTRKNRQVCANPEKKWVREYINSLEMS 70 80 90 89 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 13:52:26 2016 done: Sun Nov 6 13:52:26 2016 Total Scan time: 1.320 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]