(Linear) (Six-base) MAPSORT of: KIEE3264.seq Check: 3801 from: 1 to: 1929 KIEE3264.orf With 182 enzymes: SgfI * March 22, 2012 16:28 .. AclI AA'CG_TT Cuts at: 0 1785 1929 Size: 1785 144 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1826 1894 1929 Size: 1826 68 35 Fragments arranged by size: 1826 68 35 AfeI AGC'GCT Cuts at: 0 22 1929 Size: 22 1907 AflIII A'CryG_T Cuts at: 0 833 948 1929 Size: 833 115 981 Fragments arranged by size: 981 833 115 AhdI GACnn_n'nnGTC Cuts at: 0 1871 1929 Size: 1871 58 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 1762 1929 Size: 1762 167 AlwNI CAG_nnn'CTG Cuts at: 0 228 1929 Size: 228 1701 ApaI G_GGCC'C Cuts at: 0 210 1929 Size: 210 1719 ApoI r'AATT_y Cuts at: 0 361 369 923 1203 1929 Size: 361 8 554 280 726 Fragments arranged by size: 726 554 361 280 8 AvaI C'yCGr_G Cuts at: 0 16 115 203 1929 Size: 16 99 88 1726 Fragments arranged by size: 1726 99 88 16 BanI G'GyrC_C Cuts at: 0 79 174 443 1929 Size: 79 95 269 1486 Fragments arranged by size: 1486 269 95 79 BanII G_rGCy'C Cuts at: 0 210 797 1673 1929 Size: 210 587 876 256 Fragments arranged by size: 876 587 256 210 BbeI G_GCGC'C Cuts at: 0 178 1929 Size: 178 1751 BbsI GAAGACnn'nnnn_ Cuts at: 0 1084 1691 1929 Size: 1084 607 238 Fragments arranged by size: 1084 607 238 BbvCI CC'TCA_GC Cuts at: 0 58 1929 Size: 58 1871 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 1278 1312 1929 Size: 1278 34 617 Fragments arranged by size: 1278 617 34 BglI GCCn_nnn'nGGC Cuts at: 0 62 183 1929 Size: 62 121 1746 Fragments arranged by size: 1746 121 62 BlpI GC'TnA_GC Cuts at: 0 106 296 1929 Size: 106 190 1633 Fragments arranged by size: 1633 190 106 Bme1580I G_kGCm'C Cuts at: 0 82 210 1929 Size: 82 128 1719 Fragments arranged by size: 1719 128 82 BmgBI CAC'GTC Cuts at: 0 746 1929 Size: 746 1183 BmrI ACTGGGnnnn_n' Cuts at: 0 216 1667 1929 Size: 216 1451 262 Fragments arranged by size: 1451 262 216 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 707 1929 Size: 707 1222 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 974 1423 1654 1753 1929 Size: 974 449 231 99 176 Fragments arranged by size: 974 449 231 176 99 Bpu10I CC'TnA_GC Cuts at: 0 58 164 1929 Size: 58 106 1765 Fragments arranged by size: 1765 106 58 BsaI GGTCTCn'nnnn_ Cuts at: 0 1227 1283 1929 Size: 1227 56 646 Fragments arranged by size: 1227 646 56 BsaAI yAC'GTr Cuts at: 0 711 949 1929 Size: 711 238 980 Fragments arranged by size: 980 711 238 BsaHI Gr'CG_yC Cuts at: 0 175 1929 Size: 175 1754 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 958 988 1929 Size: 958 30 941 Fragments arranged by size: 958 941 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 1009 1651 1756 1929 Size: 1009 642 105 173 Fragments arranged by size: 1009 642 173 105 BseYI C'CCAG_C Cuts at: 0 34 75 1364 1929 Size: 34 41 1289 565 Fragments arranged by size: 1289 565 41 34 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 457 1768 1929 Size: 457 1311 161 Fragments arranged by size: 1311 457 161 BsiEI CG_ry'CG Cuts at: 0 187 552 605 1929 Size: 187 365 53 1324 Fragments arranged by size: 1324 365 187 53 BsiHKAI G_wGCw'C Cuts at: 0 797 1929 Size: 797 1132 BsmI GAATG_Cn' Cuts at: 0 641 1929 Size: 641 1288 BsmBI CGTCTCn'nnnn_ Cuts at: 0 1633 1929 Size: 1633 296 Bsp1286I G_dGCh'C Cuts at: 0 82 210 797 1673 1929 Size: 82 128 587 876 256 Fragments arranged by size: 876 587 256 128 82 BspHI T'CATG_A Cuts at: 0 906 1929 Size: 906 1023 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 236 1542 1929 Size: 236 1306 387 Fragments arranged by size: 1306 387 236 BsrDI GCAATG_nn' Cuts at: 0 1382 1929 Size: 1382 547 BsrFI r'CCGG_y Cuts at: 0 121 171 619 1929 Size: 121 50 448 1310 Fragments arranged by size: 1310 448 121 50 BssHII G'CGCG_C Cuts at: 0 101 1929 Size: 101 1828 BssSI C'ACGA_G Cuts at: 0 1697 1929 Size: 1697 232 BstXI CCAn_nnnn'nTGG Cuts at: 0 1273 1680 1929 Size: 1273 407 249 Fragments arranged by size: 1273 407 249 BtgI C'CryG_G Cuts at: 0 546 630 863 1895 1929 Size: 546 84 233 1032 34 Fragments arranged by size: 1032 546 233 84 34 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 227 1929 Size: 227 1702 BtsI GCAGTG_nn' Cuts at: 0 1572 1929 Size: 1572 357 ClaI AT'CG_AT Cuts at: 0 501 1929 Size: 501 1428 EaeI y'GGCC_r Cuts at: 0 184 602 866 1929 Size: 184 418 264 1063 Fragments arranged by size: 1063 418 264 184 EagI C'GGCC_G Cuts at: 0 184 602 1929 Size: 184 418 1327 Fragments arranged by size: 1327 418 184 EarI CTCTTCn'nnn_ Cuts at: 0 16 250 332 422 674 1571 1929 Size: 16 234 82 90 252 897 358 Fragments arranged by size: 897 358 252 234 90 82 16 EcoICRI GAG'CTC Cuts at: 0 795 1929 Size: 795 1134 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 974 1423 1654 1753 1826 1894 1929 Size: 974 449 231 99 73 68 35 Fragments arranged by size: 974 449 231 99 73 68 35 EcoO109I rG'GnC_Cy Cuts at: 0 199 726 1434 1929 Size: 199 527 708 495 Fragments arranged by size: 708 527 495 199 EcoRI G'AATT_C Cuts at: 0 923 1929 Size: 923 1006 FseI GG_CCGG'CC Cuts at: 0 125 1929 Size: 125 1804 HaeII r_GCGC'y Cuts at: 0 24 95 178 194 1929 Size: 24 71 83 16 1735 Fragments arranged by size: 1735 83 71 24 16 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 333 335 365 367 1804 1836 1857 1889 Size: 333 2 30 2 1437 32 21 32 Cuts at: 1889 1929 Size: 40 Fragments arranged by size: 1437 333 40 32 32 30 21 2 2 HincII GTy'rAC Cuts at: 0 1008 1929 Size: 1008 921 KasI G'GCGC_C Cuts at: 0 174 1929 Size: 174 1755 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 936 1150 1929 Size: 936 214 779 Fragments arranged by size: 936 779 214 MscI TGG'CCA Cuts at: 0 868 1929 Size: 868 1061 MslI CAynn'nnrTG Cuts at: 0 535 883 1271 1744 1929 Size: 535 348 388 473 185 Fragments arranged by size: 535 473 388 348 185 MspA1I CmG'CkG Cuts at: 0 6 62 891 1443 1515 1897 1929 Size: 6 56 829 552 72 382 32 Fragments arranged by size: 829 552 382 72 56 32 6 NaeI GCC'GGC Cuts at: 0 123 173 1929 Size: 123 50 1756 Fragments arranged by size: 1756 123 50 NarI GG'CG_CC Cuts at: 0 175 1929 Size: 175 1754 NcoI C'CATG_G Cuts at: 0 863 1929 Size: 863 1066 NgoMIV G'CCGG_C Cuts at: 0 121 171 1929 Size: 121 50 1758 Fragments arranged by size: 1758 121 50 NspI r_CATG'y Cuts at: 0 837 1133 1743 1929 Size: 837 296 610 186 Fragments arranged by size: 837 610 296 186 PciI A'CATG_T Cuts at: 0 833 1929 Size: 833 1096 PflMI CCAn_nnn'nTGG Cuts at: 0 423 1031 1929 Size: 423 608 898 Fragments arranged by size: 898 608 423 PpuMI rG'GwC_Cy Cuts at: 0 199 726 1434 1929 Size: 199 527 708 495 Fragments arranged by size: 708 527 495 199 PshAI GACnn'nnGTC Cuts at: 0 766 1622 1929 Size: 766 856 307 Fragments arranged by size: 856 766 307 PspOMI G'GGCC_C Cuts at: 0 206 1929 Size: 206 1723 PspXI vC'TCGA_Gb Cuts at: 0 16 1929 Size: 16 1913 PstI C_TGCA'G Cuts at: 0 161 663 1433 1929 Size: 161 502 770 496 Fragments arranged by size: 770 502 496 161 PvuII CAG'CTG Cuts at: 0 891 1443 1929 Size: 891 552 486 Fragments arranged by size: 891 552 486 SacI G_AGCT'C Cuts at: 0 797 1929 Size: 797 1132 SacII CC_GC'GG Cuts at: 0 1898 1929 Size: 1898 31 SanDI GG'GwC_CC Cuts at: 0 199 1929 Size: 199 1730 SapI GCTCTTCn'nnn_ Cuts at: 0 16 1929 Size: 16 1913 SfcI C'TryA_G Cuts at: 0 157 659 1214 1429 1929 Size: 157 502 555 215 500 Fragments arranged by size: 555 502 500 215 157 SfiI GGCCn_nnn'nGGCC Cuts at: 0 62 1929 Size: 62 1867 SfoI GGC'GCC Cuts at: 0 176 1929 Size: 176 1753 SgrAI Cr'CCGG_yG Cuts at: 0 171 1929 Size: 171 1758 SmaI CCC'GGG Cuts at: 0 205 1929 Size: 205 1724 SmlI C'TyrA_G Cuts at: 0 16 1929 Size: 16 1913 SnaBI TAC'GTA Cuts at: 0 711 1929 Size: 711 1218 SphI G_CATG'C Cuts at: 0 1743 1929 Size: 1743 186 SspI AAT'ATT Cuts at: 0 1149 1476 1929 Size: 1149 327 453 Fragments arranged by size: 1149 453 327 StyI C'CwwG_G Cuts at: 0 644 863 1929 Size: 644 219 1066 Fragments arranged by size: 1066 644 219 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 643 1615 1929 Size: 643 972 314 Fragments arranged by size: 972 643 314 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 1107 1139 1929 Size: 1107 32 790 Fragments arranged by size: 1107 790 32 Tth111I GACn'n_nGTC Cuts at: 0 784 1929 Size: 784 1145 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 870 1929 Size: 870 1059 XhoI C'TCGA_G Cuts at: 0 16 1929 Size: 16 1913 XmaI C'CCGG_G Cuts at: 0 203 1929 Size: 203 1726 Enzymes that do cut: AclI AcuI AfeI AflIII AhdI AlfI AlwNI ApaI ApoI AvaI BanI BanII BbeI BbsI BbvCI BcgI BglI BlpI Bme1580I BmgBI BmrI BplI BpmI Bpu10I BsaI BsaAI BsaHI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BspHI BspMI BsrDI BsrFI BssHII BssSI BstXI BtgI BtgZI BtsI ClaI EaeI EagI EarI EcoICRI Eco57MI EcoO109I EcoRI FseI HaeII Hin4I HincII KasI MmeI MscI MslI MspA1I NaeI NarI NcoI NgoMIV NspI PciI PflMI PpuMI PshAI PspOMI PspXI PstI PvuII SacI SacII SanDI SapI SfcI SfiI SfoI SgrAI SmaI SmlI SnaBI SphI SspI StyI TaqII TstI Tth111I XcmI XhoI XmaI Enzymes that do not cut: AarI AatII AccI Acc65I AflII AgeI AleI AloI ApaLI AscI AseI AsiSI AvrII BaeI BamHI BciVI BclI BfrBI BglII BmtI BpuEI BsaBI BsaWI BsiWI BspEI BsrBI BsrGI BstAPI BstBI BstEII BstYI BstZ17I Bsu36I CspCI DraI DraIII DrdI EciI EcoNI EcoRV FalI FspI FspAI HindIII HpaI KpnI MfeI MluI NdeI NheI NotI NruI NsiI PacI PasI PfoI PmeI PmlI PpiI PsiI PsrI PvuI RsrII SalI SbfI ScaI SexAI SgfI SpeI SrfI StuI SwaI TatI XbaI XmnI ZraI