FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5632, 490 aa 1>>>pF1KE5632 490 - 490 aa - 490 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.4951+/-0.00111; mu= -4.2721+/- 0.067 mean_var=280.6682+/-56.141, 0's: 0 Z-trim(111.7): 18 B-trim: 3 in 1/54 Lambda= 0.076556 statistics sampled from 12595 (12603) to 12595 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.716), E-opt: 0.2 (0.387), width: 16 Scan time: 3.720 The best scores are: opt bits E(32554) CCDS10551.1 RSL1D1 gene_id:26156|Hs108|chr16 ( 490) 3138 359.9 3.5e-99 >>CCDS10551.1 RSL1D1 gene_id:26156|Hs108|chr16 (490 aa) initn: 3138 init1: 3138 opt: 3138 Z-score: 1894.2 bits: 359.9 E(32554): 3.5e-99 Smith-Waterman score: 3138; 100.0% identity (100.0% similar) in 490 aa overlap (1-490:1-490) 10 20 30 40 50 60 pF1KE5 MEDSASASLSSAAATGTSTSTPAAPTARKQLDKEQVRKAVDALLTHCKSRKNNYGLLLNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MEDSASASLSSAAATGTSTSTPAAPTARKQLDKEQVRKAVDALLTHCKSRKNNYGLLLNE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 NESLFLMVVLWKIPSKELRVRLTLPHSIRSDSEDICLFTKDEPNSTPEKTEQFYRKLLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 NESLFLMVVLWKIPSKELRVRLTLPHSIRSDSEDICLFTKDEPNSTPEKTEQFYRKLLNK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 HGIKTVSQIISLQTLKKEYKSYEAKLRLLSSFDFFLTDARIRRLLPSLIGRHFYQRKKVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 HGIKTVSQIISLQTLKKEYKSYEAKLRLLSSFDFFLTDARIRRLLPSLIGRHFYQRKKVP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 VSVNLLSKNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQIEHIIENIVAVTKGLSEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 VSVNLLSKNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQIEHIIENIVAVTKGLSEK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 LPEKWESVKLLFVKTEKSAALPIFSSFVSNWDEATKRSLLNKKKKEARRKRRERNFEKQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 LPEKWESVKLLFVKTEKSAALPIFSSFVSNWDEATKRSLLNKKKKEARRKRRERNFEKQK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 ERKKKRQQARKTASVLSKDDVAPESGDTTVKKPESKKEQTPEHGKKKRGRGKAQVKATNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 ERKKKRQQARKTASVLSKDDVAPESGDTTVKKPESKKEQTPEHGKKKRGRGKAQVKATNE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 SEDEIPQLVPIGKKTPANEKVEIQKHATGKKSPAKSPNPSTPRGKKRKALPASETPKAAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 SEDEIPQLVPIGKKTPANEKVEIQKHATGKKSPAKSPNPSTPRGKKRKALPASETPKAAE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 SETPGKSPEKKPKIKEEAVKEKSPSLGKKDARQTPKKPEAKFFTTPSKSVRKASHTPKKW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 SETPGKSPEKKPKIKEEAVKEKSPSLGKKDARQTPKKPEAKFFTTPSKSVRKASHTPKKW 430 440 450 460 470 480 490 pF1KE5 PKKPKVPQST :::::::::: CCDS10 PKKPKVPQST 490 490 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:22:01 2016 done: Tue Nov 8 05:22:02 2016 Total Scan time: 3.720 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]