Result of FASTA (ccds) for pFN21AE5159
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE5159, 160 aa
  1>>>pF1KE5159 160 - 160 aa - 160 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.6577+/-0.00061; mu= 15.5316+/- 0.037
 mean_var=57.5193+/-11.149, 0's: 0 Z-trim(110.8): 23  B-trim: 66 in 2/51
 Lambda= 0.169109
 statistics sampled from 11895 (11910) to 11895 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.748), E-opt: 0.2 (0.366), width:  16
 Scan time:  1.780

The best scores are:                                      opt bits E(32554)
CCDS9560.1 RNASE3 gene_id:6037|Hs108|chr14         ( 160) 1139 285.3 1.1e-77
CCDS9561.1 RNASE2 gene_id:6036|Hs108|chr14         ( 161)  798 202.1 1.2e-52
CCDS9558.1 RNASE6 gene_id:6039|Hs108|chr14         ( 150)  409 107.1 4.4e-24
CCDS41914.1 RNASE7 gene_id:84659|Hs108|chr14       ( 156)  378 99.6 8.5e-22
CCDS9567.1 RNASE8 gene_id:122665|Hs108|chr14       ( 154)  363 95.9 1.1e-20


>>CCDS9560.1 RNASE3 gene_id:6037|Hs108|chr14              (160 aa)
 initn: 1139 init1: 1139 opt: 1139  Z-score: 1508.0  bits: 285.3 E(32554): 1.1e-77
Smith-Waterman score: 1139; 99.4% identity (99.4% similar) in 160 aa overlap (1-160:1-160)

               10        20        30        40        50        60
pF1KE5 MVPKLFTSQICLLLLLGLMGVEGSLHARPPQFTRAQWFAIQHISLNPPRCTIAMRAINNY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 MVPKLFTSQICLLLLLGLMGVEGSLHARPPQFTRAQWFAIQHISLNPPRCTIAMRAINNY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 RWRCKNQNTFLRTTFANVVNVCGNQSIRCPHNRTLNNCHRSRFRVPLLHCDLINPGAQNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 RWRCKNQNTFLRTTFANVVNVCGNQSIRCPHNRTLNNCHRSRFRVPLLHCDLINPGAQNI
               70        80        90       100       110       120

              130       140       150       160
pF1KE5 SNCRYADRPGRRFYVVACDNRDPRDSPRYPVVPVHLDTTI
       ::: ::::::::::::::::::::::::::::::::::::
CCDS95 SNCTYADRPGRRFYVVACDNRDPRDSPRYPVVPVHLDTTI
              130       140       150       160

>>CCDS9561.1 RNASE2 gene_id:6036|Hs108|chr14              (161 aa)
 initn: 829 init1: 731 opt: 798  Z-score: 1058.3  bits: 202.1 E(32554): 1.2e-52
Smith-Waterman score: 798; 69.6% identity (85.1% similar) in 161 aa overlap (1-160:1-161)

               10        20        30        40        50        60
pF1KE5 MVPKLFTSQICLLLLLGLMGVEGSLHARPPQFTRAQWFAIQHISLNPPRCTIAMRAINNY
       ::::::::::::::::::..::::::..::::: ::::  :::...  .:: ::..::::
CCDS95 MVPKLFTSQICLLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINMTSQQCTNAMQVINNY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 RWRCKNQNTFLRTTFANVVNVCGNQSIRCPHNRTLNNCHRSRFRVPLLHCDLINPGAQNI
       . ::::::::: :::::::::::: .. :: :.: .:::.:  .:::.::.: .:. :::
CCDS95 QRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNI
               70        80        90       100       110       120

              130       140        150       160
pF1KE5 SNCRYADRPGRRFYVVACDNRDPR-DSPRYPVVPVHLDTTI
       ::::::. :.  ::.::::::: : : :.:::::::::  :
CCDS95 SNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII
              130       140       150       160 

>>CCDS9558.1 RNASE6 gene_id:6039|Hs108|chr14              (150 aa)
 initn: 395 init1: 271 opt: 409  Z-score: 545.9  bits: 107.1 E(32554): 4.4e-24
Smith-Waterman score: 409; 45.0% identity (64.4% similar) in 149 aa overlap (12-160:8-150)

               10        20        30        40        50        60
pF1KE5 MVPKLFTSQICLLLLLGLMGVEGSLHARPPQFTRAQWFAIQHISLNPPRCTIAMRAINNY
                  ::::: : :    ::: : ..:.:.:: ::::. .: .:. :: .::::
CCDS95     MVLCFPLLLLLLVLWGPVCPLHAWPKRLTKAHWFEIQHIQPSPLQCNRAMSGINNY
                   10        20        30        40        50      

               70        80        90       100       110       120
pF1KE5 RWRCKNQNTFLRTTFANVVNVCGNQSIRCPHNRTLNNCHRSRFRVPLLHCDLINPGAQNI
         .::.:::::. .: ::. ::   :: : . :  .:::.:   : .  : : .    . 
CCDS95 TQHCKHQNTFLHDSFQNVAAVCDLLSIVCKNRR--HNCHQSSKPVNMTDCRLTS---GKY
         60        70        80          90       100          110 

              130       140       150       160
pF1KE5 SNCRYADRPGRRFYVVACDNRDPRDSPRYPVVPVHLDTTI
        .:::.     .:..::::  .  : : : .::::::. .
CCDS95 PQCRYSAAAQYKFFIVACDPPQKSDPP-YKLVPVHLDSIL
             120       130        140       150

>>CCDS41914.1 RNASE7 gene_id:84659|Hs108|chr14            (156 aa)
 initn: 385 init1: 234 opt: 378  Z-score: 504.8  bits: 99.6 E(32554): 8.5e-22
Smith-Waterman score: 378; 40.9% identity (65.8% similar) in 149 aa overlap (12-160:13-156)

                10        20        30        40        50         
pF1KE5  MVPKLFTSQICLLLLLGLMGVEGSLHARPPQFTRAQWFAIQHISLNPPRCTIAMRAINN
                   :::::::  .:  . :.:  .: .::: :::.. .:  :. ::. ::.
CCDS41 MAPARAGFCPLLLLLLLGLWVAEIPVSAKPKGMTSSQWFKIQHMQPSPQACNSAMKNINK
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KE5 YRWRCKNQNTFLRTTFANVVNVCGNQSIRCPHNRTLNNCHRSRFRVPLLHCDLINPGAQN
       .  :::. ::::.  :..:. .: . .: : ..   .:::.:.  : :  : : . : . 
CCDS41 HTKRCKDLNTFLHEPFSSVAATCQTPKIACKNGD--KNCHQSHGAVSLTMCKLTS-GKH-
               70        80        90         100       110        

     120       130       140       150       160
pF1KE5 ISNCRYADRPGRRFYVVACDNRDPRDSPRYPVVPVHLDTTI
         :::: ..   . :::::   . .:: .. .:::::: ..
CCDS41 -PNCRYKEKRQNKSYVVACKPPQKKDSQQFHLVPVHLDRVL
         120       130       140       150      

>>CCDS9567.1 RNASE8 gene_id:122665|Hs108|chr14            (154 aa)
 initn: 374 init1: 233 opt: 363  Z-score: 485.1  bits: 95.9 E(32554): 1.1e-20
Smith-Waterman score: 363; 40.3% identity (64.4% similar) in 149 aa overlap (12-160:12-154)

               10        20        30        40        50        60
pF1KE5 MVPKLFTSQICLLLLLGLMGVEGSLHARPPQFTRAQWFAIQHISLNPPRCTIAMRAINNY
                  :::::::  .:  ..:.: ..: .:::  ::.. .:  :. ::  ::.:
CCDS95 MAPARAGCCPLLLLLLGLWVAEVLVRAKPKDMTSSQWFKTQHVQPSPQACNSAMSIINKY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 RWRCKNQNTFLRTTFANVVNVCGNQSIRCPHNRTLNNCHRSRFRVPLLHCDLINPGAQNI
         :::. ::::.  :..:. .: . .: : .  . .:::.:.  . :   .: .    . 
CCDS95 TERCKDLNTFLHEPFSSVAITCQTPNIACKN--SCKNCHQSHGPMSLTMGELTS---GKY
               70        80        90         100       110        

              130       140       150       160
pF1KE5 SNCRYADRPGRRFYVVACDNRDPRDSPRYPVVPVHLDTTI
        :::: ..     :.::::  .  : : ::.:::::: ..
CCDS95 PNCRYKEKHLNTPYIVACDPPQQGD-PGYPLVPVHLDKVV
         120       130       140        150    




160 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 22:09:37 2016 done: Mon Nov  7 22:09:37 2016
 Total Scan time:  1.780 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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