FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5159, 160 aa 1>>>pF1KE5159 160 - 160 aa - 160 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.6577+/-0.00061; mu= 15.5316+/- 0.037 mean_var=57.5193+/-11.149, 0's: 0 Z-trim(110.8): 23 B-trim: 66 in 2/51 Lambda= 0.169109 statistics sampled from 11895 (11910) to 11895 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.748), E-opt: 0.2 (0.366), width: 16 Scan time: 1.780 The best scores are: opt bits E(32554) CCDS9560.1 RNASE3 gene_id:6037|Hs108|chr14 ( 160) 1139 285.3 1.1e-77 CCDS9561.1 RNASE2 gene_id:6036|Hs108|chr14 ( 161) 798 202.1 1.2e-52 CCDS9558.1 RNASE6 gene_id:6039|Hs108|chr14 ( 150) 409 107.1 4.4e-24 CCDS41914.1 RNASE7 gene_id:84659|Hs108|chr14 ( 156) 378 99.6 8.5e-22 CCDS9567.1 RNASE8 gene_id:122665|Hs108|chr14 ( 154) 363 95.9 1.1e-20 >>CCDS9560.1 RNASE3 gene_id:6037|Hs108|chr14 (160 aa) initn: 1139 init1: 1139 opt: 1139 Z-score: 1508.0 bits: 285.3 E(32554): 1.1e-77 Smith-Waterman score: 1139; 99.4% identity (99.4% similar) in 160 aa overlap (1-160:1-160) 10 20 30 40 50 60 pF1KE5 MVPKLFTSQICLLLLLGLMGVEGSLHARPPQFTRAQWFAIQHISLNPPRCTIAMRAINNY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 MVPKLFTSQICLLLLLGLMGVEGSLHARPPQFTRAQWFAIQHISLNPPRCTIAMRAINNY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 RWRCKNQNTFLRTTFANVVNVCGNQSIRCPHNRTLNNCHRSRFRVPLLHCDLINPGAQNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 RWRCKNQNTFLRTTFANVVNVCGNQSIRCPHNRTLNNCHRSRFRVPLLHCDLINPGAQNI 70 80 90 100 110 120 130 140 150 160 pF1KE5 SNCRYADRPGRRFYVVACDNRDPRDSPRYPVVPVHLDTTI ::: :::::::::::::::::::::::::::::::::::: CCDS95 SNCTYADRPGRRFYVVACDNRDPRDSPRYPVVPVHLDTTI 130 140 150 160 >>CCDS9561.1 RNASE2 gene_id:6036|Hs108|chr14 (161 aa) initn: 829 init1: 731 opt: 798 Z-score: 1058.3 bits: 202.1 E(32554): 1.2e-52 Smith-Waterman score: 798; 69.6% identity (85.1% similar) in 161 aa overlap (1-160:1-161) 10 20 30 40 50 60 pF1KE5 MVPKLFTSQICLLLLLGLMGVEGSLHARPPQFTRAQWFAIQHISLNPPRCTIAMRAINNY ::::::::::::::::::..::::::..::::: :::: :::... .:: ::..:::: CCDS95 MVPKLFTSQICLLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINMTSQQCTNAMQVINNY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 RWRCKNQNTFLRTTFANVVNVCGNQSIRCPHNRTLNNCHRSRFRVPLLHCDLINPGAQNI . ::::::::: :::::::::::: .. :: :.: .:::.: .:::.::.: .:. ::: CCDS95 QRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNI 70 80 90 100 110 120 130 140 150 160 pF1KE5 SNCRYADRPGRRFYVVACDNRDPR-DSPRYPVVPVHLDTTI ::::::. :. ::.::::::: : : :.::::::::: : CCDS95 SNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII 130 140 150 160 >>CCDS9558.1 RNASE6 gene_id:6039|Hs108|chr14 (150 aa) initn: 395 init1: 271 opt: 409 Z-score: 545.9 bits: 107.1 E(32554): 4.4e-24 Smith-Waterman score: 409; 45.0% identity (64.4% similar) in 149 aa overlap (12-160:8-150) 10 20 30 40 50 60 pF1KE5 MVPKLFTSQICLLLLLGLMGVEGSLHARPPQFTRAQWFAIQHISLNPPRCTIAMRAINNY ::::: : : ::: : ..:.:.:: ::::. .: .:. :: .:::: CCDS95 MVLCFPLLLLLLVLWGPVCPLHAWPKRLTKAHWFEIQHIQPSPLQCNRAMSGINNY 10 20 30 40 50 70 80 90 100 110 120 pF1KE5 RWRCKNQNTFLRTTFANVVNVCGNQSIRCPHNRTLNNCHRSRFRVPLLHCDLINPGAQNI .::.:::::. .: ::. :: :: : . : .:::.: : . : : . . CCDS95 TQHCKHQNTFLHDSFQNVAAVCDLLSIVCKNRR--HNCHQSSKPVNMTDCRLTS---GKY 60 70 80 90 100 110 130 140 150 160 pF1KE5 SNCRYADRPGRRFYVVACDNRDPRDSPRYPVVPVHLDTTI .:::. .:..:::: . : : : .::::::. . CCDS95 PQCRYSAAAQYKFFIVACDPPQKSDPP-YKLVPVHLDSIL 120 130 140 150 >>CCDS41914.1 RNASE7 gene_id:84659|Hs108|chr14 (156 aa) initn: 385 init1: 234 opt: 378 Z-score: 504.8 bits: 99.6 E(32554): 8.5e-22 Smith-Waterman score: 378; 40.9% identity (65.8% similar) in 149 aa overlap (12-160:13-156) 10 20 30 40 50 pF1KE5 MVPKLFTSQICLLLLLGLMGVEGSLHARPPQFTRAQWFAIQHISLNPPRCTIAMRAINN ::::::: .: . :.: .: .::: :::.. .: :. ::. ::. CCDS41 MAPARAGFCPLLLLLLLGLWVAEIPVSAKPKGMTSSQWFKIQHMQPSPQACNSAMKNINK 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE5 YRWRCKNQNTFLRTTFANVVNVCGNQSIRCPHNRTLNNCHRSRFRVPLLHCDLINPGAQN . :::. ::::. :..:. .: . .: : .. .:::.:. : : : : . : . CCDS41 HTKRCKDLNTFLHEPFSSVAATCQTPKIACKNGD--KNCHQSHGAVSLTMCKLTS-GKH- 70 80 90 100 110 120 130 140 150 160 pF1KE5 ISNCRYADRPGRRFYVVACDNRDPRDSPRYPVVPVHLDTTI :::: .. . ::::: . .:: .. .:::::: .. CCDS41 -PNCRYKEKRQNKSYVVACKPPQKKDSQQFHLVPVHLDRVL 120 130 140 150 >>CCDS9567.1 RNASE8 gene_id:122665|Hs108|chr14 (154 aa) initn: 374 init1: 233 opt: 363 Z-score: 485.1 bits: 95.9 E(32554): 1.1e-20 Smith-Waterman score: 363; 40.3% identity (64.4% similar) in 149 aa overlap (12-160:12-154) 10 20 30 40 50 60 pF1KE5 MVPKLFTSQICLLLLLGLMGVEGSLHARPPQFTRAQWFAIQHISLNPPRCTIAMRAINNY ::::::: .: ..:.: ..: .::: ::.. .: :. :: ::.: CCDS95 MAPARAGCCPLLLLLLGLWVAEVLVRAKPKDMTSSQWFKTQHVQPSPQACNSAMSIINKY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 RWRCKNQNTFLRTTFANVVNVCGNQSIRCPHNRTLNNCHRSRFRVPLLHCDLINPGAQNI :::. ::::. :..:. .: . .: : . . .:::.:. . : .: . . CCDS95 TERCKDLNTFLHEPFSSVAITCQTPNIACKN--SCKNCHQSHGPMSLTMGELTS---GKY 70 80 90 100 110 130 140 150 160 pF1KE5 SNCRYADRPGRRFYVVACDNRDPRDSPRYPVVPVHLDTTI :::: .. :.:::: . : : ::.:::::: .. CCDS95 PNCRYKEKHLNTPYIVACDPPQQGD-PGYPLVPVHLDKVV 120 130 140 150 160 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:09:37 2016 done: Mon Nov 7 22:09:37 2016 Total Scan time: 1.780 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]