FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4158, 532 aa 1>>>pF1KE4158 532 - 532 aa - 532 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0116+/-0.00041; mu= 15.6180+/- 0.026 mean_var=115.0831+/-23.421, 0's: 0 Z-trim(113.3): 141 B-trim: 0 in 0/54 Lambda= 0.119555 statistics sampled from 22425 (22574) to 22425 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.623), E-opt: 0.2 (0.265), width: 16 Scan time: 9.810 The best scores are: opt bits E(85289) NP_036306 (OMIM: 609073) F-box/WD repeat-containin ( 532) 3614 635.0 1.7e-181 NP_699179 (OMIM: 609073) F-box/WD repeat-containin ( 598) 3344 588.5 1.9e-167 XP_016874665 (OMIM: 609073) PREDICTED: F-box/WD re ( 599) 3344 588.5 1.9e-167 XP_016874664 (OMIM: 609073) PREDICTED: F-box/WD re ( 517) 3339 587.6 3.1e-167 XP_005253924 (OMIM: 609073) PREDICTED: F-box/WD re ( 417) 2498 442.4 1.2e-123 XP_005253925 (OMIM: 609073) PREDICTED: F-box/WD re ( 417) 2498 442.4 1.2e-123 XP_016874667 (OMIM: 609073) PREDICTED: F-box/WD re ( 328) 2144 381.3 2.5e-105 XP_016874666 (OMIM: 609073) PREDICTED: F-box/WD re ( 423) 2097 373.3 8.3e-103 XP_011530390 (OMIM: 606278) PREDICTED: F-box/WD re ( 540) 213 48.4 6.6e-05 NP_001013433 (OMIM: 606278) F-box/WD repeat-contai ( 589) 213 48.4 7e-05 NP_060785 (OMIM: 606278) F-box/WD repeat-containin ( 627) 213 48.5 7.3e-05 XP_011530388 (OMIM: 606278) PREDICTED: F-box/WD re ( 679) 213 48.5 7.8e-05 XP_011530389 (OMIM: 606278) PREDICTED: F-box/WD re ( 679) 213 48.5 7.8e-05 XP_011530385 (OMIM: 606278) PREDICTED: F-box/WD re ( 707) 213 48.5 8e-05 XP_011530386 (OMIM: 606278) PREDICTED: F-box/WD re ( 707) 213 48.5 8e-05 NP_361014 (OMIM: 606278) F-box/WD repeat-containin ( 707) 213 48.5 8e-05 XP_016863851 (OMIM: 606278) PREDICTED: F-box/WD re ( 707) 213 48.5 8e-05 XP_011530387 (OMIM: 606278) PREDICTED: F-box/WD re ( 707) 213 48.5 8e-05 NP_004805 (OMIM: 607797) U5 small nuclear ribonucl ( 357) 169 40.6 0.0094 >>NP_036306 (OMIM: 609073) F-box/WD repeat-containing pr (532 aa) initn: 3614 init1: 3614 opt: 3614 Z-score: 3379.5 bits: 635.0 E(85289): 1.7e-181 Smith-Waterman score: 3614; 99.8% identity (100.0% similar) in 532 aa overlap (1-532:1-532) 10 20 30 40 50 60 pF1KE4 MDDYSLDEFRRRWQEELAQAQAPKKRRRPEAAERRARRPENEMNDVPFFDIQLPYELAIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 MDDYSLDEFRRRWQEELAQAQAPKKRRRPEAAERRARRPENEMNDVPFFDIQLPYELAIN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 IFQYLDRKELGRCAQVSKTWKVIAEDEVLWYRLCQQEGHLPDSSISDYSCWKLIFQECRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 IFQYLDRKELGRCAQVSKTWKVIAEDEVLWYRLCQQEGHLPDSSISDYSCWKLIFQECRA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 KEHMLQTNWKNRKGAVSELEHVPDTVLCDVHSHDGVVIAGYTSGDVRVWDTRTWDYVAPF :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 KEHMLRTNWKNRKGAVSELEHVPDTVLCDVHSHDGVVIAGYTSGDVRVWDTRTWDYVAPF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LESEDEEDEPGMQPNVSFVRINSSLAVAAYEDGFLNIWDLRTGKYPVHRFEHDARIQALA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 LESEDEEDEPGMQPNVSFVRINSSLAVAAYEDGFLNIWDLRTGKYPVHRFEHDARIQALA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 LSQDDATVATASAFDVVMLSPNEEGYWQIAAEFEVPKLVQYLEIVPETRRYPVAVAAAGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 LSQDDATVATASAFDVVMLSPNEEGYWQIAAEFEVPKLVQYLEIVPETRRYPVAVAAAGD 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 LMYLLKAEDSARTLLYAHGPPVTCLDVSANQVAFGVQGLGWVYEGSKILVYSLEAGRRLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 LMYLLKAEDSARTLLYAHGPPVTCLDVSANQVAFGVQGLGWVYEGSKILVYSLEAGRRLL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 KLGNVLRDFTCVNLSDSPPNLMVSGNMDGRVRIHDLRSGNIALSLSAHQLRVSAVQMDDW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 KLGNVLRDFTCVNLSDSPPNLMVSGNMDGRVRIHDLRSGNIALSLSAHQLRVSAVQMDDW 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 KIVSGGEEGLVSVWDYRMNQKLWEVYSGHPVQHISFSSHSLITANVPYQTVMRNADLDSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 KIVSGGEEGLVSVWDYRMNQKLWEVYSGHPVQHISFSSHSLITANVPYQTVMRNADLDSF 430 440 450 460 470 480 490 500 510 520 530 pF1KE4 TTHRRHRGLIRAYEFAVDQLAFQSPLPVCRSSCDAMATHYYDLALAFPYNHV :::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 TTHRRHRGLIRAYEFAVDQLAFQSPLPVCRSSCDAMATHYYDLALAFPYNHV 490 500 510 520 530 >>NP_699179 (OMIM: 609073) F-box/WD repeat-containing pr (598 aa) initn: 3341 init1: 3341 opt: 3344 Z-score: 3127.1 bits: 588.5 E(85289): 1.9e-167 Smith-Waterman score: 3344; 94.5% identity (97.0% similar) in 526 aa overlap (10-532:73-598) 10 20 30 pF1KE4 MDDYSLDEFRRRWQEELAQAQAPKKRRRPEAAERRAR-- : . :. .....: :. ..:. . NP_699 SGRGEQASGDPALAQRLLEGAGRPPAARATRAEGQDVASRSRSPLAREGAGGGEQLVDQL 50 60 70 80 90 100 40 50 60 70 80 90 pF1KE4 -RPENEMNDVPFFDIQLPYELAINIFQYLDRKELGRCAQVSKTWKVIAEDEVLWYRLCQQ : :::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_699 IRDLNEMNDVPFFDIQLPYELAINIFQYLDRKELGRCAQVSKTWKVIAEDEVLWYRLCQQ 110 120 130 140 150 160 100 110 120 130 140 150 pF1KE4 EGHLPDSSISDYSCWKLIFQECRAKEHMLQTNWKNRKGAVSELEHVPDTVLCDVHSHDGV :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: NP_699 EGHLPDSSISDYSCWKLIFQECRAKEHMLRTNWKNRKGAVSELEHVPDTVLCDVHSHDGV 170 180 190 200 210 220 160 170 180 190 200 210 pF1KE4 VIAGYTSGDVRVWDTRTWDYVAPFLESEDEEDEPGMQPNVSFVRINSSLAVAAYEDGFLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_699 VIAGYTSGDVRVWDTRTWDYVAPFLESEDEEDEPGMQPNVSFVRINSSLAVAAYEDGFLN 230 240 250 260 270 280 220 230 240 250 260 270 pF1KE4 IWDLRTGKYPVHRFEHDARIQALALSQDDATVATASAFDVVMLSPNEEGYWQIAAEFEVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_699 IWDLRTGKYPVHRFEHDARIQALALSQDDATVATASAFDVVMLSPNEEGYWQIAAEFEVP 290 300 310 320 330 340 280 290 300 310 320 330 pF1KE4 KLVQYLEIVPETRRYPVAVAAAGDLMYLLKAEDSARTLLYAHGPPVTCLDVSANQVAFGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_699 KLVQYLEIVPETRRYPVAVAAAGDLMYLLKAEDSARTLLYAHGPPVTCLDVSANQVAFGV 350 360 370 380 390 400 340 350 360 370 380 390 pF1KE4 QGLGWVYEGSKILVYSLEAGRRLLKLGNVLRDFTCVNLSDSPPNLMVSGNMDGRVRIHDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_699 QGLGWVYEGSKILVYSLEAGRRLLKLGNVLRDFTCVNLSDSPPNLMVSGNMDGRVRIHDL 410 420 430 440 450 460 400 410 420 430 440 450 pF1KE4 RSGNIALSLSAHQLRVSAVQMDDWKIVSGGEEGLVSVWDYRMNQKLWEVYSGHPVQHISF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_699 RSGNIALSLSAHQLRVSAVQMDDWKIVSGGEEGLVSVWDYRMNQKLWEVYSGHPVQHISF 470 480 490 500 510 520 460 470 480 490 500 510 pF1KE4 SSHSLITANVPYQTVMRNADLDSFTTHRRHRGLIRAYEFAVDQLAFQSPLPVCRSSCDAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_699 SSHSLITANVPYQTVMRNADLDSFTTHRRHRGLIRAYEFAVDQLAFQSPLPVCRSSCDAM 530 540 550 560 570 580 520 530 pF1KE4 ATHYYDLALAFPYNHV :::::::::::::::: NP_699 ATHYYDLALAFPYNHV 590 >-- initn: 282 init1: 276 opt: 276 Z-score: 267.3 bits: 59.3 E(85289): 3.8e-08 Smith-Waterman score: 276; 100.0% identity (100.0% similar) in 40 aa overlap (1-40:1-40) 10 20 30 40 50 60 pF1KE4 MDDYSLDEFRRRWQEELAQAQAPKKRRRPEAAERRARRPENEMNDVPFFDIQLPYELAIN :::::::::::::::::::::::::::::::::::::::: NP_699 MDDYSLDEFRRRWQEELAQAQAPKKRRRPEAAERRARRPEVGSGRGEQASGDPALAQRLL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 IFQYLDRKELGRCAQVSKTWKVIAEDEVLWYRLCQQEGHLPDSSISDYSCWKLIFQECRA NP_699 EGAGRPPAARATRAEGQDVASRSRSPLAREGAGGGEQLVDQLIRDLNEMNDVPFFDIQLP 70 80 90 100 110 120 >>XP_016874665 (OMIM: 609073) PREDICTED: F-box/WD repeat (599 aa) initn: 3344 init1: 3344 opt: 3344 Z-score: 3127.1 bits: 588.5 E(85289): 1.9e-167 Smith-Waterman score: 3344; 99.8% identity (100.0% similar) in 493 aa overlap (40-532:107-599) 10 20 30 40 50 60 pF1KE4 RRRWQEELAQAQAPKKRRRPEAAERRARRPENEMNDVPFFDIQLPYELAINIFQYLDRKE :::::::::::::::::::::::::::::: XP_016 CKLGHVSTFQPITDSNCSDSNPLPIPEDEGENEMNDVPFFDIQLPYELAINIFQYLDRKE 80 90 100 110 120 130 70 80 90 100 110 120 pF1KE4 LGRCAQVSKTWKVIAEDEVLWYRLCQQEGHLPDSSISDYSCWKLIFQECRAKEHMLQTNW ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: XP_016 LGRCAQVSKTWKVIAEDEVLWYRLCQQEGHLPDSSISDYSCWKLIFQECRAKEHMLRTNW 140 150 160 170 180 190 130 140 150 160 170 180 pF1KE4 KNRKGAVSELEHVPDTVLCDVHSHDGVVIAGYTSGDVRVWDTRTWDYVAPFLESEDEEDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KNRKGAVSELEHVPDTVLCDVHSHDGVVIAGYTSGDVRVWDTRTWDYVAPFLESEDEEDE 200 210 220 230 240 250 190 200 210 220 230 240 pF1KE4 PGMQPNVSFVRINSSLAVAAYEDGFLNIWDLRTGKYPVHRFEHDARIQALALSQDDATVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PGMQPNVSFVRINSSLAVAAYEDGFLNIWDLRTGKYPVHRFEHDARIQALALSQDDATVA 260 270 280 290 300 310 250 260 270 280 290 300 pF1KE4 TASAFDVVMLSPNEEGYWQIAAEFEVPKLVQYLEIVPETRRYPVAVAAAGDLMYLLKAED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TASAFDVVMLSPNEEGYWQIAAEFEVPKLVQYLEIVPETRRYPVAVAAAGDLMYLLKAED 320 330 340 350 360 370 310 320 330 340 350 360 pF1KE4 SARTLLYAHGPPVTCLDVSANQVAFGVQGLGWVYEGSKILVYSLEAGRRLLKLGNVLRDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SARTLLYAHGPPVTCLDVSANQVAFGVQGLGWVYEGSKILVYSLEAGRRLLKLGNVLRDF 380 390 400 410 420 430 370 380 390 400 410 420 pF1KE4 TCVNLSDSPPNLMVSGNMDGRVRIHDLRSGNIALSLSAHQLRVSAVQMDDWKIVSGGEEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TCVNLSDSPPNLMVSGNMDGRVRIHDLRSGNIALSLSAHQLRVSAVQMDDWKIVSGGEEG 440 450 460 470 480 490 430 440 450 460 470 480 pF1KE4 LVSVWDYRMNQKLWEVYSGHPVQHISFSSHSLITANVPYQTVMRNADLDSFTTHRRHRGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LVSVWDYRMNQKLWEVYSGHPVQHISFSSHSLITANVPYQTVMRNADLDSFTTHRRHRGL 500 510 520 530 540 550 490 500 510 520 530 pF1KE4 IRAYEFAVDQLAFQSPLPVCRSSCDAMATHYYDLALAFPYNHV ::::::::::::::::::::::::::::::::::::::::::: XP_016 IRAYEFAVDQLAFQSPLPVCRSSCDAMATHYYDLALAFPYNHV 560 570 580 590 >-- initn: 303 init1: 276 opt: 288 Z-score: 278.4 bits: 61.4 E(85289): 9e-09 Smith-Waterman score: 288; 65.7% identity (80.0% similar) in 70 aa overlap (1-70:1-67) 10 20 30 40 50 60 pF1KE4 MDDYSLDEFRRRWQEELAQAQAPKKRRRPEAAERRARRPENEMNDVPFFDIQLPYELAIN :::::::::::::::::::::::::::::::::::::::: . :. . :: :.. XP_016 MDDYSLDEFRRRWQEELAQAQAPKKRRRPEAAERRARRPE---TGFPLGEKWLPATLVFY 10 20 30 40 50 70 80 90 100 110 120 pF1KE4 IFQYLDRKELGRCAQVSKTWKVIAEDEVLWYRLCQQEGHLPDSSISDYSCWKLIFQECRA ... ..:: XP_016 LLSNSRERELQVMNLNSHCCKLGHVSTFQPITDSNCSDSNPLPIPEDEGENEMNDVPFFD 60 70 80 90 100 110 >>XP_016874664 (OMIM: 609073) PREDICTED: F-box/WD repeat (517 aa) initn: 3339 init1: 3339 opt: 3339 Z-score: 3123.3 bits: 587.6 E(85289): 3.1e-167 Smith-Waterman score: 3339; 99.6% identity (100.0% similar) in 493 aa overlap (40-532:25-517) 10 20 30 40 50 60 pF1KE4 RRRWQEELAQAQAPKKRRRPEAAERRARRPENEMNDVPFFDIQLPYELAINIFQYLDRKE .::::::::::::::::::::::::::::: XP_016 MCPPFSQSLIQIVQTRIHCPFLKMKNEMNDVPFFDIQLPYELAINIFQYLDRKE 10 20 30 40 50 70 80 90 100 110 120 pF1KE4 LGRCAQVSKTWKVIAEDEVLWYRLCQQEGHLPDSSISDYSCWKLIFQECRAKEHMLQTNW ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: XP_016 LGRCAQVSKTWKVIAEDEVLWYRLCQQEGHLPDSSISDYSCWKLIFQECRAKEHMLRTNW 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE4 KNRKGAVSELEHVPDTVLCDVHSHDGVVIAGYTSGDVRVWDTRTWDYVAPFLESEDEEDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KNRKGAVSELEHVPDTVLCDVHSHDGVVIAGYTSGDVRVWDTRTWDYVAPFLESEDEEDE 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE4 PGMQPNVSFVRINSSLAVAAYEDGFLNIWDLRTGKYPVHRFEHDARIQALALSQDDATVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PGMQPNVSFVRINSSLAVAAYEDGFLNIWDLRTGKYPVHRFEHDARIQALALSQDDATVA 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE4 TASAFDVVMLSPNEEGYWQIAAEFEVPKLVQYLEIVPETRRYPVAVAAAGDLMYLLKAED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TASAFDVVMLSPNEEGYWQIAAEFEVPKLVQYLEIVPETRRYPVAVAAAGDLMYLLKAED 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE4 SARTLLYAHGPPVTCLDVSANQVAFGVQGLGWVYEGSKILVYSLEAGRRLLKLGNVLRDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SARTLLYAHGPPVTCLDVSANQVAFGVQGLGWVYEGSKILVYSLEAGRRLLKLGNVLRDF 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE4 TCVNLSDSPPNLMVSGNMDGRVRIHDLRSGNIALSLSAHQLRVSAVQMDDWKIVSGGEEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TCVNLSDSPPNLMVSGNMDGRVRIHDLRSGNIALSLSAHQLRVSAVQMDDWKIVSGGEEG 360 370 380 390 400 410 430 440 450 460 470 480 pF1KE4 LVSVWDYRMNQKLWEVYSGHPVQHISFSSHSLITANVPYQTVMRNADLDSFTTHRRHRGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LVSVWDYRMNQKLWEVYSGHPVQHISFSSHSLITANVPYQTVMRNADLDSFTTHRRHRGL 420 430 440 450 460 470 490 500 510 520 530 pF1KE4 IRAYEFAVDQLAFQSPLPVCRSSCDAMATHYYDLALAFPYNHV ::::::::::::::::::::::::::::::::::::::::::: XP_016 IRAYEFAVDQLAFQSPLPVCRSSCDAMATHYYDLALAFPYNHV 480 490 500 510 >>XP_005253924 (OMIM: 609073) PREDICTED: F-box/WD repeat (417 aa) initn: 2498 init1: 2498 opt: 2498 Z-score: 2340.6 bits: 442.4 E(85289): 1.2e-123 Smith-Waterman score: 2498; 100.0% identity (100.0% similar) in 372 aa overlap (161-532:46-417) 140 150 160 170 180 190 pF1KE4 NRKGAVSELEHVPDTVLCDVHSHDGVVIAGYTSGDVRVWDTRTWDYVAPFLESEDEEDEP :::::::::::::::::::::::::::::: XP_005 RIAASLTILAGSSSSKSAEPRNTCYEPTGRYTSGDVRVWDTRTWDYVAPFLESEDEEDEP 20 30 40 50 60 70 200 210 220 230 240 250 pF1KE4 GMQPNVSFVRINSSLAVAAYEDGFLNIWDLRTGKYPVHRFEHDARIQALALSQDDATVAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GMQPNVSFVRINSSLAVAAYEDGFLNIWDLRTGKYPVHRFEHDARIQALALSQDDATVAT 80 90 100 110 120 130 260 270 280 290 300 310 pF1KE4 ASAFDVVMLSPNEEGYWQIAAEFEVPKLVQYLEIVPETRRYPVAVAAAGDLMYLLKAEDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ASAFDVVMLSPNEEGYWQIAAEFEVPKLVQYLEIVPETRRYPVAVAAAGDLMYLLKAEDS 140 150 160 170 180 190 320 330 340 350 360 370 pF1KE4 ARTLLYAHGPPVTCLDVSANQVAFGVQGLGWVYEGSKILVYSLEAGRRLLKLGNVLRDFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ARTLLYAHGPPVTCLDVSANQVAFGVQGLGWVYEGSKILVYSLEAGRRLLKLGNVLRDFT 200 210 220 230 240 250 380 390 400 410 420 430 pF1KE4 CVNLSDSPPNLMVSGNMDGRVRIHDLRSGNIALSLSAHQLRVSAVQMDDWKIVSGGEEGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 CVNLSDSPPNLMVSGNMDGRVRIHDLRSGNIALSLSAHQLRVSAVQMDDWKIVSGGEEGL 260 270 280 290 300 310 440 450 460 470 480 490 pF1KE4 VSVWDYRMNQKLWEVYSGHPVQHISFSSHSLITANVPYQTVMRNADLDSFTTHRRHRGLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VSVWDYRMNQKLWEVYSGHPVQHISFSSHSLITANVPYQTVMRNADLDSFTTHRRHRGLI 320 330 340 350 360 370 500 510 520 530 pF1KE4 RAYEFAVDQLAFQSPLPVCRSSCDAMATHYYDLALAFPYNHV :::::::::::::::::::::::::::::::::::::::::: XP_005 RAYEFAVDQLAFQSPLPVCRSSCDAMATHYYDLALAFPYNHV 380 390 400 410 >>XP_005253925 (OMIM: 609073) PREDICTED: F-box/WD repeat (417 aa) initn: 2498 init1: 2498 opt: 2498 Z-score: 2340.6 bits: 442.4 E(85289): 1.2e-123 Smith-Waterman score: 2498; 100.0% identity (100.0% similar) in 372 aa overlap (161-532:46-417) 140 150 160 170 180 190 pF1KE4 NRKGAVSELEHVPDTVLCDVHSHDGVVIAGYTSGDVRVWDTRTWDYVAPFLESEDEEDEP :::::::::::::::::::::::::::::: XP_005 RIAASLTILAGSSSSKSAEPRNTCYEPTGRYTSGDVRVWDTRTWDYVAPFLESEDEEDEP 20 30 40 50 60 70 200 210 220 230 240 250 pF1KE4 GMQPNVSFVRINSSLAVAAYEDGFLNIWDLRTGKYPVHRFEHDARIQALALSQDDATVAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GMQPNVSFVRINSSLAVAAYEDGFLNIWDLRTGKYPVHRFEHDARIQALALSQDDATVAT 80 90 100 110 120 130 260 270 280 290 300 310 pF1KE4 ASAFDVVMLSPNEEGYWQIAAEFEVPKLVQYLEIVPETRRYPVAVAAAGDLMYLLKAEDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ASAFDVVMLSPNEEGYWQIAAEFEVPKLVQYLEIVPETRRYPVAVAAAGDLMYLLKAEDS 140 150 160 170 180 190 320 330 340 350 360 370 pF1KE4 ARTLLYAHGPPVTCLDVSANQVAFGVQGLGWVYEGSKILVYSLEAGRRLLKLGNVLRDFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ARTLLYAHGPPVTCLDVSANQVAFGVQGLGWVYEGSKILVYSLEAGRRLLKLGNVLRDFT 200 210 220 230 240 250 380 390 400 410 420 430 pF1KE4 CVNLSDSPPNLMVSGNMDGRVRIHDLRSGNIALSLSAHQLRVSAVQMDDWKIVSGGEEGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 CVNLSDSPPNLMVSGNMDGRVRIHDLRSGNIALSLSAHQLRVSAVQMDDWKIVSGGEEGL 260 270 280 290 300 310 440 450 460 470 480 490 pF1KE4 VSVWDYRMNQKLWEVYSGHPVQHISFSSHSLITANVPYQTVMRNADLDSFTTHRRHRGLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VSVWDYRMNQKLWEVYSGHPVQHISFSSHSLITANVPYQTVMRNADLDSFTTHRRHRGLI 320 330 340 350 360 370 500 510 520 530 pF1KE4 RAYEFAVDQLAFQSPLPVCRSSCDAMATHYYDLALAFPYNHV :::::::::::::::::::::::::::::::::::::::::: XP_005 RAYEFAVDQLAFQSPLPVCRSSCDAMATHYYDLALAFPYNHV 380 390 400 410 >>XP_016874667 (OMIM: 609073) PREDICTED: F-box/WD repeat (328 aa) initn: 2144 init1: 2144 opt: 2144 Z-score: 2011.9 bits: 381.3 E(85289): 2.5e-105 Smith-Waterman score: 2144; 100.0% identity (100.0% similar) in 320 aa overlap (213-532:9-328) 190 200 210 220 230 240 pF1KE4 SEDEEDEPGMQPNVSFVRINSSLAVAAYEDGFLNIWDLRTGKYPVHRFEHDARIQALALS :::::::::::::::::::::::::::::: XP_016 MCGLNEQRGFLNIWDLRTGKYPVHRFEHDARIQALALS 10 20 30 250 260 270 280 290 300 pF1KE4 QDDATVATASAFDVVMLSPNEEGYWQIAAEFEVPKLVQYLEIVPETRRYPVAVAAAGDLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QDDATVATASAFDVVMLSPNEEGYWQIAAEFEVPKLVQYLEIVPETRRYPVAVAAAGDLM 40 50 60 70 80 90 310 320 330 340 350 360 pF1KE4 YLLKAEDSARTLLYAHGPPVTCLDVSANQVAFGVQGLGWVYEGSKILVYSLEAGRRLLKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YLLKAEDSARTLLYAHGPPVTCLDVSANQVAFGVQGLGWVYEGSKILVYSLEAGRRLLKL 100 110 120 130 140 150 370 380 390 400 410 420 pF1KE4 GNVLRDFTCVNLSDSPPNLMVSGNMDGRVRIHDLRSGNIALSLSAHQLRVSAVQMDDWKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GNVLRDFTCVNLSDSPPNLMVSGNMDGRVRIHDLRSGNIALSLSAHQLRVSAVQMDDWKI 160 170 180 190 200 210 430 440 450 460 470 480 pF1KE4 VSGGEEGLVSVWDYRMNQKLWEVYSGHPVQHISFSSHSLITANVPYQTVMRNADLDSFTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VSGGEEGLVSVWDYRMNQKLWEVYSGHPVQHISFSSHSLITANVPYQTVMRNADLDSFTT 220 230 240 250 260 270 490 500 510 520 530 pF1KE4 HRRHRGLIRAYEFAVDQLAFQSPLPVCRSSCDAMATHYYDLALAFPYNHV :::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 HRRHRGLIRAYEFAVDQLAFQSPLPVCRSSCDAMATHYYDLALAFPYNHV 280 290 300 310 320 >>XP_016874666 (OMIM: 609073) PREDICTED: F-box/WD repeat (423 aa) initn: 2097 init1: 2097 opt: 2097 Z-score: 1966.7 bits: 373.3 E(85289): 8.3e-103 Smith-Waterman score: 2097; 99.7% identity (100.0% similar) in 308 aa overlap (40-347:107-414) 10 20 30 40 50 60 pF1KE4 RRRWQEELAQAQAPKKRRRPEAAERRARRPENEMNDVPFFDIQLPYELAINIFQYLDRKE :::::::::::::::::::::::::::::: XP_016 CKLGHVSTFQPITDSNCSDSNPLPIPEDEGENEMNDVPFFDIQLPYELAINIFQYLDRKE 80 90 100 110 120 130 70 80 90 100 110 120 pF1KE4 LGRCAQVSKTWKVIAEDEVLWYRLCQQEGHLPDSSISDYSCWKLIFQECRAKEHMLQTNW ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: XP_016 LGRCAQVSKTWKVIAEDEVLWYRLCQQEGHLPDSSISDYSCWKLIFQECRAKEHMLRTNW 140 150 160 170 180 190 130 140 150 160 170 180 pF1KE4 KNRKGAVSELEHVPDTVLCDVHSHDGVVIAGYTSGDVRVWDTRTWDYVAPFLESEDEEDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KNRKGAVSELEHVPDTVLCDVHSHDGVVIAGYTSGDVRVWDTRTWDYVAPFLESEDEEDE 200 210 220 230 240 250 190 200 210 220 230 240 pF1KE4 PGMQPNVSFVRINSSLAVAAYEDGFLNIWDLRTGKYPVHRFEHDARIQALALSQDDATVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PGMQPNVSFVRINSSLAVAAYEDGFLNIWDLRTGKYPVHRFEHDARIQALALSQDDATVA 260 270 280 290 300 310 250 260 270 280 290 300 pF1KE4 TASAFDVVMLSPNEEGYWQIAAEFEVPKLVQYLEIVPETRRYPVAVAAAGDLMYLLKAED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TASAFDVVMLSPNEEGYWQIAAEFEVPKLVQYLEIVPETRRYPVAVAAAGDLMYLLKAED 320 330 340 350 360 370 310 320 330 340 350 360 pF1KE4 SARTLLYAHGPPVTCLDVSANQVAFGVQGLGWVYEGSKILVYSLEAGRRLLKLGNVLRDF :::::::::::::::::::::::::::::::::::::: XP_016 SARTLLYAHGPPVTCLDVSANQVAFGVQGLGWVYEGSKGEDPRPPQW 380 390 400 410 420 370 380 390 400 410 420 pF1KE4 TCVNLSDSPPNLMVSGNMDGRVRIHDLRSGNIALSLSAHQLRVSAVQMDDWKIVSGGEEG >-- initn: 303 init1: 276 opt: 288 Z-score: 280.4 bits: 61.2 E(85289): 7e-09 Smith-Waterman score: 288; 65.7% identity (80.0% similar) in 70 aa overlap (1-70:1-67) 10 20 30 40 50 60 pF1KE4 MDDYSLDEFRRRWQEELAQAQAPKKRRRPEAAERRARRPENEMNDVPFFDIQLPYELAIN :::::::::::::::::::::::::::::::::::::::: . :. . :: :.. XP_016 MDDYSLDEFRRRWQEELAQAQAPKKRRRPEAAERRARRPE---TGFPLGEKWLPATLVFY 10 20 30 40 50 70 80 90 100 110 120 pF1KE4 IFQYLDRKELGRCAQVSKTWKVIAEDEVLWYRLCQQEGHLPDSSISDYSCWKLIFQECRA ... ..:: XP_016 LLSNSRERELQVMNLNSHCCKLGHVSTFQPITDSNCSDSNPLPIPEDEGENEMNDVPFFD 60 70 80 90 100 110 >>XP_011530390 (OMIM: 606278) PREDICTED: F-box/WD repeat (540 aa) initn: 441 init1: 154 opt: 213 Z-score: 209.1 bits: 48.4 E(85289): 6.6e-05 Smith-Waterman score: 327; 22.2% identity (54.4% similar) in 436 aa overlap (53-464:117-518) 30 40 50 60 70 80 pF1KE4 PKKRRRPEAAERRARRPENEMNDVPFFDIQLPYELAINIFQYLDRKELGRCAQVSKTWKV :: :::. ....:. :.: . ::. . :.. XP_011 DELIDSCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRI 90 100 110 120 130 140 90 100 110 120 130 pF1KE4 IAEDEVLWYRLCQQEG-----HLPDSSISD----YSCWKLIFQECRAKEHMLQTNWKNRK .:::..:: . :..:: :. .. .: :: . ..: ..::: :. XP_011 LAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAY----IRQHRIDTNW--RR 150 160 170 180 190 200 140 150 160 170 180 190 pF1KE4 GAVSE---LEHVPDTVLCDVHSHDGVVIAGYTSGDVRVWDTRTWDYVAPFLESEDEEDEP : .. :. : :. .. . ...: .. ..::.. : . .. XP_011 GELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLV--------- 210 220 230 240 250 200 210 220 230 240 pF1KE4 GMQPNVSFVRINSSLAVAAYEDGFLNIWDLRTGKYPVHR-FEHDARIQALALSQDDATVA : .: .. ... ... : :..:. .::. .: . : . .. . : . .. . XP_011 GHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGEC-IHTLYGHTSTVRCMHLHEKRVVSG 260 270 280 290 300 310 250 260 270 280 290 300 pF1KE4 TASAFDVVMLSPNEEGYWQIAAEFEVPKLVQYLEIVPETRRYPVAVAAAGDLMYLLKAED . .: : . . . .. . . ::: . :: .:..: :.: . . XP_011 SRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-----DGRR---VVSGAYDFMVKVWDPE 320 330 340 350 360 310 320 330 340 350 360 pF1KE4 SARTL--LYAHGPPVTCLDVSANQVAFGVQGLGWVYEGSKILVYSLEAGRRLLKLGNVLR . : : .: : :. .. .:. : ..: :...:.: . : . XP_011 TETCLHTLQGHTNRVYSLQFDGIHVVSGSLD-------TSIRVWDVETGNCIHTLTGHQS 370 380 390 400 410 370 380 390 400 410 420 pF1KE4 DFTCVNLSDSPPNLMVSGNMDGRVRIHDLRSGNIALSLSA---HQLRVSAVQMDDWKIVS . ..:.: :..:::: :. :.: :...:. .:.. :: :. .:.. ... XP_011 LTSGMELKD---NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVIT 420 430 440 450 460 470 430 440 450 460 470 pF1KE4 GGEEGLVSVWDYRMNQKLWEVY------SGHPVQHISFSSHSLITANVPYQTVMRNADLD ....: :..:: . .. . .. :: : .: :. .:. : XP_011 SSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLV 480 490 500 510 520 530 480 490 500 510 520 530 pF1KE4 SFTTHRRHRGLIRAYEFAVDQLAFQSPLPVCRSSCDAMATHYYDLALAFPYNHV XP_011 LDFDVDMK 540 >>NP_001013433 (OMIM: 606278) F-box/WD repeat-containing (589 aa) initn: 441 init1: 154 opt: 213 Z-score: 208.6 bits: 48.4 E(85289): 7e-05 Smith-Waterman score: 327; 22.2% identity (54.4% similar) in 436 aa overlap (53-464:166-567) 30 40 50 60 70 80 pF1KE4 PKKRRRPEAAERRARRPENEMNDVPFFDIQLPYELAINIFQYLDRKELGRCAQVSKTWKV :: :::. ....:. :.: . ::. . :.. NP_001 DELIDSCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRI 140 150 160 170 180 190 90 100 110 120 130 pF1KE4 IAEDEVLWYRLCQQEG-----HLPDSSISD----YSCWKLIFQECRAKEHMLQTNWKNRK .:::..:: . :..:: :. .. .: :: . ..: ..::: :. NP_001 LAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAY----IRQHRIDTNW--RR 200 210 220 230 240 140 150 160 170 180 190 pF1KE4 GAVSE---LEHVPDTVLCDVHSHDGVVIAGYTSGDVRVWDTRTWDYVAPFLESEDEEDEP : .. :. : :. .. . ...: .. ..::.. : . .. NP_001 GELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLV--------- 250 260 270 280 290 300 200 210 220 230 240 pF1KE4 GMQPNVSFVRINSSLAVAAYEDGFLNIWDLRTGKYPVHR-FEHDARIQALALSQDDATVA : .: .. ... ... : :..:. .::. .: . : . .. . : . .. . NP_001 GHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGEC-IHTLYGHTSTVRCMHLHEKRVVSG 310 320 330 340 350 250 260 270 280 290 300 pF1KE4 TASAFDVVMLSPNEEGYWQIAAEFEVPKLVQYLEIVPETRRYPVAVAAAGDLMYLLKAED . .: : . . . .. . . ::: . :: .:..: :.: . . NP_001 SRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-----DGRR---VVSGAYDFMVKVWDPE 360 370 380 390 400 410 310 320 330 340 350 360 pF1KE4 SARTL--LYAHGPPVTCLDVSANQVAFGVQGLGWVYEGSKILVYSLEAGRRLLKLGNVLR . : : .: : :. .. .:. : ..: :...:.: . : . NP_001 TETCLHTLQGHTNRVYSLQFDGIHVVSGSLD-------TSIRVWDVETGNCIHTLTGHQS 420 430 440 450 460 370 380 390 400 410 420 pF1KE4 DFTCVNLSDSPPNLMVSGNMDGRVRIHDLRSGNIALSLSA---HQLRVSAVQMDDWKIVS . ..:.: :..:::: :. :.: :...:. .:.. :: :. .:.. ... NP_001 LTSGMELKD---NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVIT 470 480 490 500 510 520 430 440 450 460 470 pF1KE4 GGEEGLVSVWDYRMNQKLWEVY------SGHPVQHISFSSHSLITANVPYQTVMRNADLD ....: :..:: . .. . .. :: : .: :. .:. : NP_001 SSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLV 530 540 550 560 570 580 480 490 500 510 520 530 pF1KE4 SFTTHRRHRGLIRAYEFAVDQLAFQSPLPVCRSSCDAMATHYYDLALAFPYNHV NP_001 LDFDVDMK 532 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 01:48:32 2016 done: Sun Nov 6 01:48:33 2016 Total Scan time: 9.810 Total Display time: 0.070 Function used was FASTA [36.3.4 Apr, 2011]