FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2014, 592 aa 1>>>pF1KE2014 592 - 592 aa - 592 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.4482+/-0.000575; mu= 6.5329+/- 0.035 mean_var=295.2593+/-62.072, 0's: 0 Z-trim(116.1): 42 B-trim: 889 in 1/52 Lambda= 0.074640 statistics sampled from 27037 (27077) to 27037 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.669), E-opt: 0.2 (0.317), width: 16 Scan time: 8.330 The best scores are: opt bits E(85289) NP_006759 (OMIM: 604986) BRCA1-associated protein ( 592) 3936 438.2 3.6e-122 XP_005254001 (OMIM: 604986) PREDICTED: BRCA1-assoc ( 633) 3768 420.2 1e-116 XP_016875481 (OMIM: 604986) PREDICTED: BRCA1-assoc ( 538) 3429 383.6 9.2e-106 XP_016875482 (OMIM: 604986) PREDICTED: BRCA1-assoc ( 443) 2980 335.1 2.9e-91 XP_016875484 (OMIM: 604986) PREDICTED: BRCA1-assoc ( 443) 2980 335.1 2.9e-91 XP_016875483 (OMIM: 604986) PREDICTED: BRCA1-assoc ( 443) 2980 335.1 2.9e-91 XP_011537091 (OMIM: 604986) PREDICTED: BRCA1-assoc ( 305) 1976 226.8 8.1e-59 >>NP_006759 (OMIM: 604986) BRCA1-associated protein [Hom (592 aa) initn: 3936 init1: 3936 opt: 3936 Z-score: 2314.4 bits: 438.2 E(85289): 3.6e-122 Smith-Waterman score: 3936; 100.0% identity (100.0% similar) in 592 aa overlap (1-592:1-592) 10 20 30 40 50 60 pF1KE2 MSVSLVVIRLELAEHSPVPAGFGFSAAAGEMSDEEIKKTTLASAVACLEGKSPGEKVAII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MSVSLVVIRLELAEHSPVPAGFGFSAAAGEMSDEEIKKTTLASAVACLEGKSPGEKVAII 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 HQHLGRREMTDVIIETMKSNPDELKTTVEERKSSEASPTAQRSKDHSKECINAAPDSPSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 HQHLGRREMTDVIIETMKSNPDELKTTVEERKSSEASPTAQRSKDHSKECINAAPDSPSK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 QLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLKEDVRRSAMLCILTVPAAMTSHDLMKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 QLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLKEDVRRSAMLCILTVPAAMTSHDLMKF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 VAPFNEVIEQMKIIRDSTPNQYMVLIKFRAQADADSFYMTCNGRQFNSIEDDVCQLVYVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 VAPFNEVIEQMKIIRDSTPNQYMVLIKFRAQADADSFYMTCNGRQFNSIEDDVCQLVYVE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 RAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 RAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTTC 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 PVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 PVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 TNHRVWDYAGDNYVHRLVASKTDGKIVQYECEGDTCQEEKIDALQLEYSYLLTSQLESQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 TNHRVWDYAGDNYVHRLVASKTDGKIVQYECEGDTCQEEKIDALQLEYSYLLTSQLESQR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 IYWENKIVRIEKDTAEEINNMKTKFKETIEKCDNLEHKLNDLLKEKQSVERKCTQLNTKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 IYWENKIVRIEKDTAEEINNMKTKFKETIEKCDNLEHKLNDLLKEKQSVERKCTQLNTKV 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 AKLTNELKEEQEMNKCLRANQVLLQNKLKEEERVLKETCDQKDLQITEIQEQLRDVMFYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 AKLTNELKEEQEMNKCLRANQVLLQNKLKEEERVLKETCDQKDLQITEIQEQLRDVMFYL 490 500 510 520 530 540 550 560 570 580 590 pF1KE2 ETQQKINHLPAETRQEIQEGQINIAMASASSPASSGGSGKLPSRKGRSKRGK :::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 ETQQKINHLPAETRQEIQEGQINIAMASASSPASSGGSGKLPSRKGRSKRGK 550 560 570 580 590 >>XP_005254001 (OMIM: 604986) PREDICTED: BRCA1-associate (633 aa) initn: 3922 init1: 3768 opt: 3768 Z-score: 2216.3 bits: 420.2 E(85289): 1e-116 Smith-Waterman score: 3795; 93.4% identity (93.4% similar) in 624 aa overlap (10-592:10-633) 10 20 pF1KE2 MSVSLVVIRLELAEHSPVPAGFGFSAA--------------------------------- :::::::::::::::::: XP_005 MSVSLVVIRLELAEHSPVPAGFGFSAAGESRGLAAFPVAGSGPGGLPFPKHWPGKSPRRG 10 20 30 40 50 60 30 40 50 60 70 pF1KE2 --------AGEMSDEEIKKTTLASAVACLEGKSPGEKVAIIHQHLGRREMTDVIIETMKS :::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LLPRKTRRAGEMSDEEIKKTTLASAVACLEGKSPGEKVAIIHQHLGRREMTDVIIETMKS 70 80 90 100 110 120 80 90 100 110 120 130 pF1KE2 NPDELKTTVEERKSSEASPTAQRSKDHSKECINAAPDSPSKQLPDQISFFSGNPSVEIVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 NPDELKTTVEERKSSEASPTAQRSKDHSKECINAAPDSPSKQLPDQISFFSGNPSVEIVH 130 140 150 160 170 180 140 150 160 170 180 190 pF1KE2 GIMHLYKTNKMTSLKEDVRRSAMLCILTVPAAMTSHDLMKFVAPFNEVIEQMKIIRDSTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GIMHLYKTNKMTSLKEDVRRSAMLCILTVPAAMTSHDLMKFVAPFNEVIEQMKIIRDSTP 190 200 210 220 230 240 200 210 220 230 240 250 pF1KE2 NQYMVLIKFRAQADADSFYMTCNGRQFNSIEDDVCQLVYVERAEVLKSEDGASLPVMDLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 NQYMVLIKFRAQADADSFYMTCNGRQFNSIEDDVCQLVYVERAEVLKSEDGASLPVMDLT 250 260 270 280 290 300 260 270 280 290 300 310 pF1KE2 ELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTTCPVCRYCQTPEPVEENKCFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTTCPVCRYCQTPEPVEENKCFE 310 320 330 340 350 360 320 330 340 350 360 370 pF1KE2 CGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAGDNYVHRLVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 CGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAGDNYVHRLVA 370 380 390 400 410 420 380 390 400 410 420 430 pF1KE2 SKTDGKIVQYECEGDTCQEEKIDALQLEYSYLLTSQLESQRIYWENKIVRIEKDTAEEIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SKTDGKIVQYECEGDTCQEEKIDALQLEYSYLLTSQLESQRIYWENKIVRIEKDTAEEIN 430 440 450 460 470 480 440 450 460 470 480 490 pF1KE2 NMKTKFKETIEKCDNLEHKLNDLLKEKQSVERKCTQLNTKVAKLTNELKEEQEMNKCLRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 NMKTKFKETIEKCDNLEHKLNDLLKEKQSVERKCTQLNTKVAKLTNELKEEQEMNKCLRA 490 500 510 520 530 540 500 510 520 530 540 550 pF1KE2 NQVLLQNKLKEEERVLKETCDQKDLQITEIQEQLRDVMFYLETQQKINHLPAETRQEIQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 NQVLLQNKLKEEERVLKETCDQKDLQITEIQEQLRDVMFYLETQQKINHLPAETRQEIQE 550 560 570 580 590 600 560 570 580 590 pF1KE2 GQINIAMASASSPASSGGSGKLPSRKGRSKRGK ::::::::::::::::::::::::::::::::: XP_005 GQINIAMASASSPASSGGSGKLPSRKGRSKRGK 610 620 630 >>XP_016875481 (OMIM: 604986) PREDICTED: BRCA1-associate (538 aa) initn: 3429 init1: 3429 opt: 3429 Z-score: 2019.8 bits: 383.6 E(85289): 9.2e-106 Smith-Waterman score: 3476; 90.9% identity (90.9% similar) in 592 aa overlap (1-592:1-538) 10 20 30 40 50 60 pF1KE2 MSVSLVVIRLELAEHSPVPAGFGFSAAAGEMSDEEIKKTTLASAVACLEGKSPGEKVAII ::::::::::::::::::::::::::: XP_016 MSVSLVVIRLELAEHSPVPAGFGFSAA--------------------------------- 10 20 70 80 90 100 110 120 pF1KE2 HQHLGRREMTDVIIETMKSNPDELKTTVEERKSSEASPTAQRSKDHSKECINAAPDSPSK ::::::::::::::::::::::::::::::::::::::: XP_016 ---------------------DELKTTVEERKSSEASPTAQRSKDHSKECINAAPDSPSK 30 40 50 60 130 140 150 160 170 180 pF1KE2 QLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLKEDVRRSAMLCILTVPAAMTSHDLMKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLKEDVRRSAMLCILTVPAAMTSHDLMKF 70 80 90 100 110 120 190 200 210 220 230 240 pF1KE2 VAPFNEVIEQMKIIRDSTPNQYMVLIKFRAQADADSFYMTCNGRQFNSIEDDVCQLVYVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VAPFNEVIEQMKIIRDSTPNQYMVLIKFRAQADADSFYMTCNGRQFNSIEDDVCQLVYVE 130 140 150 160 170 180 250 260 270 280 290 300 pF1KE2 RAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTTC 190 200 210 220 230 240 310 320 330 340 350 360 pF1KE2 PVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQL 250 260 270 280 290 300 370 380 390 400 410 420 pF1KE2 TNHRVWDYAGDNYVHRLVASKTDGKIVQYECEGDTCQEEKIDALQLEYSYLLTSQLESQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TNHRVWDYAGDNYVHRLVASKTDGKIVQYECEGDTCQEEKIDALQLEYSYLLTSQLESQR 310 320 330 340 350 360 430 440 450 460 470 480 pF1KE2 IYWENKIVRIEKDTAEEINNMKTKFKETIEKCDNLEHKLNDLLKEKQSVERKCTQLNTKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 IYWENKIVRIEKDTAEEINNMKTKFKETIEKCDNLEHKLNDLLKEKQSVERKCTQLNTKV 370 380 390 400 410 420 490 500 510 520 530 540 pF1KE2 AKLTNELKEEQEMNKCLRANQVLLQNKLKEEERVLKETCDQKDLQITEIQEQLRDVMFYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AKLTNELKEEQEMNKCLRANQVLLQNKLKEEERVLKETCDQKDLQITEIQEQLRDVMFYL 430 440 450 460 470 480 550 560 570 580 590 pF1KE2 ETQQKINHLPAETRQEIQEGQINIAMASASSPASSGGSGKLPSRKGRSKRGK :::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ETQQKINHLPAETRQEIQEGQINIAMASASSPASSGGSGKLPSRKGRSKRGK 490 500 510 520 530 >>XP_016875482 (OMIM: 604986) PREDICTED: BRCA1-associate (443 aa) initn: 2980 init1: 2980 opt: 2980 Z-score: 1759.4 bits: 335.1 E(85289): 2.9e-91 Smith-Waterman score: 2980; 100.0% identity (100.0% similar) in 443 aa overlap (150-592:1-443) 120 130 140 150 160 170 pF1KE2 KQLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLKEDVRRSAMLCILTVPAAMTSHDLMK :::::::::::::::::::::::::::::: XP_016 MTSLKEDVRRSAMLCILTVPAAMTSHDLMK 10 20 30 180 190 200 210 220 230 pF1KE2 FVAPFNEVIEQMKIIRDSTPNQYMVLIKFRAQADADSFYMTCNGRQFNSIEDDVCQLVYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FVAPFNEVIEQMKIIRDSTPNQYMVLIKFRAQADADSFYMTCNGRQFNSIEDDVCQLVYV 40 50 60 70 80 90 240 250 260 270 280 290 pF1KE2 ERAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ERAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTT 100 110 120 130 140 150 300 310 320 330 340 350 pF1KE2 CPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQ 160 170 180 190 200 210 360 370 380 390 400 410 pF1KE2 LTNHRVWDYAGDNYVHRLVASKTDGKIVQYECEGDTCQEEKIDALQLEYSYLLTSQLESQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LTNHRVWDYAGDNYVHRLVASKTDGKIVQYECEGDTCQEEKIDALQLEYSYLLTSQLESQ 220 230 240 250 260 270 420 430 440 450 460 470 pF1KE2 RIYWENKIVRIEKDTAEEINNMKTKFKETIEKCDNLEHKLNDLLKEKQSVERKCTQLNTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RIYWENKIVRIEKDTAEEINNMKTKFKETIEKCDNLEHKLNDLLKEKQSVERKCTQLNTK 280 290 300 310 320 330 480 490 500 510 520 530 pF1KE2 VAKLTNELKEEQEMNKCLRANQVLLQNKLKEEERVLKETCDQKDLQITEIQEQLRDVMFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VAKLTNELKEEQEMNKCLRANQVLLQNKLKEEERVLKETCDQKDLQITEIQEQLRDVMFY 340 350 360 370 380 390 540 550 560 570 580 590 pF1KE2 LETQQKINHLPAETRQEIQEGQINIAMASASSPASSGGSGKLPSRKGRSKRGK ::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LETQQKINHLPAETRQEIQEGQINIAMASASSPASSGGSGKLPSRKGRSKRGK 400 410 420 430 440 >>XP_016875484 (OMIM: 604986) PREDICTED: BRCA1-associate (443 aa) initn: 2980 init1: 2980 opt: 2980 Z-score: 1759.4 bits: 335.1 E(85289): 2.9e-91 Smith-Waterman score: 2980; 100.0% identity (100.0% similar) in 443 aa overlap (150-592:1-443) 120 130 140 150 160 170 pF1KE2 KQLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLKEDVRRSAMLCILTVPAAMTSHDLMK :::::::::::::::::::::::::::::: XP_016 MTSLKEDVRRSAMLCILTVPAAMTSHDLMK 10 20 30 180 190 200 210 220 230 pF1KE2 FVAPFNEVIEQMKIIRDSTPNQYMVLIKFRAQADADSFYMTCNGRQFNSIEDDVCQLVYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FVAPFNEVIEQMKIIRDSTPNQYMVLIKFRAQADADSFYMTCNGRQFNSIEDDVCQLVYV 40 50 60 70 80 90 240 250 260 270 280 290 pF1KE2 ERAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ERAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTT 100 110 120 130 140 150 300 310 320 330 340 350 pF1KE2 CPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQ 160 170 180 190 200 210 360 370 380 390 400 410 pF1KE2 LTNHRVWDYAGDNYVHRLVASKTDGKIVQYECEGDTCQEEKIDALQLEYSYLLTSQLESQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LTNHRVWDYAGDNYVHRLVASKTDGKIVQYECEGDTCQEEKIDALQLEYSYLLTSQLESQ 220 230 240 250 260 270 420 430 440 450 460 470 pF1KE2 RIYWENKIVRIEKDTAEEINNMKTKFKETIEKCDNLEHKLNDLLKEKQSVERKCTQLNTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RIYWENKIVRIEKDTAEEINNMKTKFKETIEKCDNLEHKLNDLLKEKQSVERKCTQLNTK 280 290 300 310 320 330 480 490 500 510 520 530 pF1KE2 VAKLTNELKEEQEMNKCLRANQVLLQNKLKEEERVLKETCDQKDLQITEIQEQLRDVMFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VAKLTNELKEEQEMNKCLRANQVLLQNKLKEEERVLKETCDQKDLQITEIQEQLRDVMFY 340 350 360 370 380 390 540 550 560 570 580 590 pF1KE2 LETQQKINHLPAETRQEIQEGQINIAMASASSPASSGGSGKLPSRKGRSKRGK ::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LETQQKINHLPAETRQEIQEGQINIAMASASSPASSGGSGKLPSRKGRSKRGK 400 410 420 430 440 >>XP_016875483 (OMIM: 604986) PREDICTED: BRCA1-associate (443 aa) initn: 2980 init1: 2980 opt: 2980 Z-score: 1759.4 bits: 335.1 E(85289): 2.9e-91 Smith-Waterman score: 2980; 100.0% identity (100.0% similar) in 443 aa overlap (150-592:1-443) 120 130 140 150 160 170 pF1KE2 KQLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLKEDVRRSAMLCILTVPAAMTSHDLMK :::::::::::::::::::::::::::::: XP_016 MTSLKEDVRRSAMLCILTVPAAMTSHDLMK 10 20 30 180 190 200 210 220 230 pF1KE2 FVAPFNEVIEQMKIIRDSTPNQYMVLIKFRAQADADSFYMTCNGRQFNSIEDDVCQLVYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FVAPFNEVIEQMKIIRDSTPNQYMVLIKFRAQADADSFYMTCNGRQFNSIEDDVCQLVYV 40 50 60 70 80 90 240 250 260 270 280 290 pF1KE2 ERAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ERAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTT 100 110 120 130 140 150 300 310 320 330 340 350 pF1KE2 CPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQ 160 170 180 190 200 210 360 370 380 390 400 410 pF1KE2 LTNHRVWDYAGDNYVHRLVASKTDGKIVQYECEGDTCQEEKIDALQLEYSYLLTSQLESQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LTNHRVWDYAGDNYVHRLVASKTDGKIVQYECEGDTCQEEKIDALQLEYSYLLTSQLESQ 220 230 240 250 260 270 420 430 440 450 460 470 pF1KE2 RIYWENKIVRIEKDTAEEINNMKTKFKETIEKCDNLEHKLNDLLKEKQSVERKCTQLNTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RIYWENKIVRIEKDTAEEINNMKTKFKETIEKCDNLEHKLNDLLKEKQSVERKCTQLNTK 280 290 300 310 320 330 480 490 500 510 520 530 pF1KE2 VAKLTNELKEEQEMNKCLRANQVLLQNKLKEEERVLKETCDQKDLQITEIQEQLRDVMFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VAKLTNELKEEQEMNKCLRANQVLLQNKLKEEERVLKETCDQKDLQITEIQEQLRDVMFY 340 350 360 370 380 390 540 550 560 570 580 590 pF1KE2 LETQQKINHLPAETRQEIQEGQINIAMASASSPASSGGSGKLPSRKGRSKRGK ::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LETQQKINHLPAETRQEIQEGQINIAMASASSPASSGGSGKLPSRKGRSKRGK 400 410 420 430 440 >>XP_011537091 (OMIM: 604986) PREDICTED: BRCA1-associate (305 aa) initn: 1976 init1: 1976 opt: 1976 Z-score: 1177.0 bits: 226.8 E(85289): 8.1e-59 Smith-Waterman score: 1976; 100.0% identity (100.0% similar) in 293 aa overlap (300-592:13-305) 270 280 290 300 310 320 pF1KE2 RMDESVNGILTTLCNHSFHSQCLQRWDDTTCPVCRYCQTPEPVEENKCFECGVQENLWIC :::::::::::::::::::::::::::::: XP_011 MWKELKCSNLKMCPVCRYCQTPEPVEENKCFECGVQENLWIC 10 20 30 40 330 340 350 360 370 380 pF1KE2 LICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAGDNYVHRLVASKTDGKIVQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAGDNYVHRLVASKTDGKIVQY 50 60 70 80 90 100 390 400 410 420 430 440 pF1KE2 ECEGDTCQEEKIDALQLEYSYLLTSQLESQRIYWENKIVRIEKDTAEEINNMKTKFKETI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ECEGDTCQEEKIDALQLEYSYLLTSQLESQRIYWENKIVRIEKDTAEEINNMKTKFKETI 110 120 130 140 150 160 450 460 470 480 490 500 pF1KE2 EKCDNLEHKLNDLLKEKQSVERKCTQLNTKVAKLTNELKEEQEMNKCLRANQVLLQNKLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EKCDNLEHKLNDLLKEKQSVERKCTQLNTKVAKLTNELKEEQEMNKCLRANQVLLQNKLK 170 180 190 200 210 220 510 520 530 540 550 560 pF1KE2 EEERVLKETCDQKDLQITEIQEQLRDVMFYLETQQKINHLPAETRQEIQEGQINIAMASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EEERVLKETCDQKDLQITEIQEQLRDVMFYLETQQKINHLPAETRQEIQEGQINIAMASA 230 240 250 260 270 280 570 580 590 pF1KE2 SSPASSGGSGKLPSRKGRSKRGK ::::::::::::::::::::::: XP_011 SSPASSGGSGKLPSRKGRSKRGK 290 300 592 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 14:42:36 2016 done: Sun Nov 6 14:42:37 2016 Total Scan time: 8.330 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]