Result of FASTA (omim) for pFN21AE1245
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1245, 477 aa
  1>>>pF1KE1245 477 - 477 aa - 477 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.3841+/-0.000345; mu= 8.4760+/- 0.022
 mean_var=286.1569+/-59.487, 0's: 0 Z-trim(124.8): 481  B-trim: 4407 in 2/60
 Lambda= 0.075818
 statistics sampled from 46751 (47356) to 46751 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.812), E-opt: 0.2 (0.555), width:  16
 Scan time: 11.210

The best scores are:                                      opt bits E(85289)
NP_000675 (OMIM: 109630,607276) beta-1 adrenergic  ( 477) 3257 369.2 1.5e-101
NP_000015 (OMIM: 109690,600807,601665) beta-2 adre ( 413)  977 119.7 1.6e-26
NP_000016 (OMIM: 109691,601665) beta-3 adrenergic  ( 408)  886 109.7 1.5e-23
NP_000854 (OMIM: 182131) 5-hydroxytryptamine recep ( 390)  690 88.3 4.3e-17
NP_000855 (OMIM: 182133) 5-hydroxytryptamine recep ( 377)  644 83.2 1.4e-15
NP_000856 (OMIM: 182132) 5-hydroxytryptamine recep ( 365)  634 82.1 2.9e-15
XP_011534091 (OMIM: 182132) PREDICTED: 5-hydroxytr ( 365)  634 82.1 2.9e-15
NP_387512 (OMIM: 126451,181500,190300) D(3) dopami ( 367)  604 78.8 2.8e-14
NP_001309139 (OMIM: 182134) 5-hydroxytryptamine re ( 366)  571 75.2 3.4e-13
NP_001309137 (OMIM: 182134) 5-hydroxytryptamine re ( 366)  571 75.2 3.4e-13
NP_001309138 (OMIM: 182134) 5-hydroxytryptamine re ( 366)  571 75.2 3.4e-13
NP_000857 (OMIM: 182134) 5-hydroxytryptamine recep ( 366)  571 75.2 3.4e-13
XP_005264808 (OMIM: 182134) PREDICTED: 5-hydroxytr ( 366)  571 75.2 3.4e-13
XP_011531966 (OMIM: 182134) PREDICTED: 5-hydroxytr ( 366)  571 75.2 3.4e-13
NP_000785 (OMIM: 126449) D(1A) dopamine receptor [ ( 446)  570 75.2 4.2e-13
XP_006712545 (OMIM: 601122) PREDICTED: 5-hydroxytr ( 456)  529 70.7 9.5e-12
NP_001307687 (OMIM: 601122) 5-hydroxytryptamine re ( 439)  522 69.9 1.6e-11
NP_000669 (OMIM: 104219) alpha-1D adrenergic recep ( 572)  524 70.3 1.6e-11
NP_000858 (OMIM: 601122) 5-hydroxytryptamine recep ( 481)  522 70.0 1.7e-11
NP_071640 (OMIM: 142703) histamine H2 receptor iso ( 359)  509 68.4 3.7e-11
XP_006714928 (OMIM: 142703) PREDICTED: histamine H ( 362)  509 68.4 3.7e-11
NP_001124527 (OMIM: 142703) histamine H2 receptor  ( 397)  509 68.5 3.9e-11
XP_005265961 (OMIM: 142703) PREDICTED: histamine H ( 422)  509 68.5 4.1e-11
XP_011532851 (OMIM: 142703) PREDICTED: histamine H ( 422)  509 68.5 4.1e-11
XP_016864915 (OMIM: 142703) PREDICTED: histamine H ( 422)  509 68.5 4.1e-11
XP_011532850 (OMIM: 142703) PREDICTED: histamine H ( 422)  509 68.5 4.1e-11
XP_006714927 (OMIM: 142703) PREDICTED: histamine H ( 422)  509 68.5 4.1e-11
XP_005265876 (OMIM: 104220) PREDICTED: alpha-1B ad ( 328)  506 68.0 4.4e-11
XP_006714884 (OMIM: 104220) PREDICTED: alpha-1B ad ( 331)  506 68.0 4.4e-11
XP_005265875 (OMIM: 104220) PREDICTED: alpha-1B ad ( 366)  506 68.1 4.7e-11
XP_011532740 (OMIM: 104220) PREDICTED: alpha-1B ad ( 389)  506 68.1 4.9e-11
XP_011532739 (OMIM: 104220) PREDICTED: alpha-1B ad ( 402)  506 68.2   5e-11
NP_000670 (OMIM: 104220) alpha-1B adrenergic recep ( 520)  506 68.3 5.9e-11
XP_011532737 (OMIM: 104220) PREDICTED: alpha-1B ad ( 556)  506 68.3 6.1e-11
XP_011542714 (OMIM: 104221) PREDICTED: alpha-1A ad ( 308)  497 67.0 8.3e-11
XP_016868585 (OMIM: 104221) PREDICTED: alpha-1A ad ( 317)  497 67.0 8.5e-11
XP_011542713 (OMIM: 104221) PREDICTED: alpha-1A ad ( 324)  497 67.1 8.6e-11
NP_000672 (OMIM: 104210) alpha-2A adrenergic recep ( 465)  500 67.6 8.6e-11
NP_001309433 (OMIM: 104221) alpha-1A adrenergic re ( 342)  497 67.1 8.9e-11
NP_001309432 (OMIM: 104221) alpha-1A adrenergic re ( 370)  497 67.1 9.4e-11
NP_001309431 (OMIM: 104221) alpha-1A adrenergic re ( 372)  497 67.1 9.4e-11
NP_150645 (OMIM: 104221) alpha-1A adrenergic recep ( 429)  497 67.2   1e-10
XP_006716356 (OMIM: 104221) PREDICTED: alpha-1A ad ( 429)  497 67.2   1e-10
NP_150647 (OMIM: 104221) alpha-1A adrenergic recep ( 455)  497 67.2 1.1e-10
NP_000671 (OMIM: 104221) alpha-1A adrenergic recep ( 466)  497 67.2 1.1e-10
NP_150646 (OMIM: 104221) alpha-1A adrenergic recep ( 475)  497 67.3 1.1e-10
XP_016868583 (OMIM: 104221) PREDICTED: alpha-1A ad ( 475)  497 67.3 1.1e-10
XP_006716355 (OMIM: 104221) PREDICTED: alpha-1A ad ( 475)  497 67.3 1.1e-10
XP_016868584 (OMIM: 104221) PREDICTED: alpha-1A ad ( 475)  497 67.3 1.1e-10
NP_000862 (OMIM: 601109) 5-hydroxytryptamine recep ( 440)  490 66.4 1.8e-10


>>NP_000675 (OMIM: 109630,607276) beta-1 adrenergic rece  (477 aa)
 initn: 3257 init1: 3257 opt: 3257  Z-score: 1944.4  bits: 369.2 E(85289): 1.5e-101
Smith-Waterman score: 3257; 99.8% identity (99.8% similar) in 477 aa overlap (1-477:1-477)

               10        20        30        40        50        60
pF1KE1 MGAGVLVLGASEPGNLSSAAPLPDGAATAARLLVPASPPASLLPPASESPEPLSQQWTAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MGAGVLVLGASEPGNLSSAAPLPDGAATAARLLVPASPPASLLPPASESPEPLSQQWTAG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 MGLLMALIVLLIVAGNVLVIVAIAKTPRLQTLTNLFIMSLASADLVMGLLVVPFGATIVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MGLLMALIVLLIVAGNVLVIVAIAKTPRLQTLTNLFIMSLASADLVMGLLVVPFGATIVV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 WGRWEYGSFFCELWTSVDVLCVTASIETLCVIALDRYLAITSPFRYQSLLTRARARGLVC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 WGRWEYGSFFCELWTSVDVLCVTASIETLCVIALDRYLAITSPFRYQSLLTRARARGLVC
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 TVWAISALVSFLPILMHWWRAESDEARRCYNDPKCCDFVTNRAYAIASSVVSFYVPLCIM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 TVWAISALVSFLPILMHWWRAESDEARRCYNDPKCCDFVTNRAYAIASSVVSFYVPLCIM
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 AFVYLRVFREAQKQVKKIDSCERRFLGGPARPPSPSPSPVPAPAPPPGPPRPAAAAATAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 AFVYLRVFREAQKQVKKIDSCERRFLGGPARPPSPSPSPVPAPAPPPGPPRPAAAAATAP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 LANGRAGKRRPSRLVALREQKALKTLGIIMGVFTLCWLPFFLANVVKAFHRELVPDRLFV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LANGRAGKRRPSRLVALREQKALKTLGIIMGVFTLCWLPFFLANVVKAFHRELVPDRLFV
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE1 FFNWLGYANSAFNPIIYCRSPDFRKAFQRLLCCARRAARRRHATHGDRPRASGCLARPGP
       :::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::
NP_000 FFNWLGYANSAFNPIIYCRSPDFRKAFQGLLCCARRAARRRHATHGDRPRASGCLARPGP
              370       380       390       400       410       420

              430       440       450       460       470       
pF1KE1 PPSPGAASDDDDDDVVGATPPARLLEPWAGCNGGAAADSDSSLDEPCRPGFASESKV
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PPSPGAASDDDDDDVVGATPPARLLEPWAGCNGGAAADSDSSLDEPCRPGFASESKV
              430       440       450       460       470       

>>NP_000015 (OMIM: 109690,600807,601665) beta-2 adrenerg  (413 aa)
 initn: 1327 init1: 957 opt: 977  Z-score: 597.3  bits: 119.7 E(85289): 1.6e-26
Smith-Waterman score: 1313; 54.4% identity (74.9% similar) in 390 aa overlap (35-413:4-365)

           10        20        30        40         50             
pF1KE1 VLVLGASEPGNLSSAAPLPDGAATAARLLVPASPPASLLPPA-SESPE-PLSQQ----WT
                                     :..  : :: :  :..:.  ..::    :.
NP_000                            MGQPGNGSAFLLAPNRSHAPDHDVTQQRDEVWV
                                          10        20        30   

       60        70        80        90       100       110        
pF1KE1 AGMGLLMALIVLLIVAGNVLVIVAIAKTPRLQTLTNLFIMSLASADLVMGLLVVPFGATI
       .:::..:.:::: :: ::::::.::::  ::::.:: :: ::: ::::::: ::::::. 
NP_000 VGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAH
            40        50        60        70        80        90   

      120       130       140       150       160       170        
pF1KE1 VVWGRWEYGSFFCELWTSVDVLCVTASIETLCVIALDRYLAITSPFRYQSLLTRARARGL
       ..   : .:.:.::.:::.::::::::::::::::.:::.::::::.::::::. .:: .
NP_000 ILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVI
           100       110       120       130       140       150   

      180       190       200       210       220       230        
pF1KE1 VCTVWAISALVSFLPILMHWWRAESDEARRCYNDPKCCDFVTNRAYAIASSVVSFYVPLC
       .  :: .:.:.::::: :::.::  .::  :: .  :::: ::.:::::::.::::::: 
NP_000 ILMVWIVSGLTSFLPIQMHWYRATHQEAINCYANETCCDFFTNQAYAIASSIVSFYVPLV
           160       170       180       190       200       210   

      240       250       260       270       280       290        
pF1KE1 IMAFVYLRVFREAQKQVKKIDSCERRFLGGPARPPSPSPSPVPAPAPPPGPPRPAAAAAT
       ::.::: :::.::..:..:::. : ::          . : :                  
NP_000 IMVFVYSRVFQEAKRQLQKIDKSEGRF-------HVQNLSQVEQ----------------
           220       230       240              250                

      300         310       320       330       340       350      
pF1KE1 APLANGRAGK--RRPSRLVALREQKALKTLGIIMGVFTLCWLPFFLANVVKAFHRELVPD
           .::.:.  :: :..  :.:.:::::::::::.:::::::::..:.:.... .:.  
NP_000 ----DGRTGHGLRRSSKFC-LKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRK
                  260        270       280       290       300     

        360       370       380       390          400       410   
pF1KE1 RLFVFFNWLGYANSAFNPIIYCRSPDFRKAFQRLLCCAR---RAARRRHATHGDRPRASG
       ......::.::.::.:::.::::::::: :::.:::  :   .:    ....:.  . ::
NP_000 EVYILLNWIGYVNSGFNPLIYCRSPDFRIAFQELLCLRRSSLKAYGNGYSSNGNTGEQSG
         310       320       330       340       350       360     

           420       430       440       450       460       470   
pF1KE1 CLARPGPPPSPGAASDDDDDDVVGATPPARLLEPWAGCNGGAAADSDSSLDEPCRPGFAS
                                                                   
NP_000 YHVEQEKENKLLCEDLPGTEDFVGHQGTVPSDNIDSQGRNCSTNDSLL            
         370       380       390       400       410               

>>NP_000016 (OMIM: 109691,601665) beta-3 adrenergic rece  (408 aa)
 initn: 839 init1: 625 opt: 886  Z-score: 543.5  bits: 109.7 E(85289): 1.5e-23
Smith-Waterman score: 1293; 52.4% identity (71.1% similar) in 422 aa overlap (10-424:2-394)

               10        20        30        40        50        60
pF1KE1 MGAGVLVLGASEPGNLSSAAPLPDGAATAARLLVPASPPASLLPPASESPEPLSQQWTAG
                :  : . :: :: ::  .     :.: .  .: :: .   :      : :.
NP_000         MAPWPHENSSLAPWPDLPT-----LAPNTANTSGLPGV---P------WEAA
                       10             20        30                 

                70        80        90       100       110         
pF1KE1 M-GLLMALIVLLIVAGNVLVIVAIAKTPRLQTLTNLFIMSLASADLVMGLLVVPFGATIV
       . : :.:: ::  :.::.::::::: ::::::.::.:. :::.::::::::::: .::..
NP_000 LAGALLALAVLATVGGNLLVIVAIAWTPRLQTMTNVFVTSLAAADLVMGLLVVPPAATLA
       40        50        60        70        80        90        

     120       130       140       150       160       170         
pF1KE1 VWGRWEYGSFFCELWTSVDVLCVTASIETLCVIALDRYLAITSPFRYQSLLTRARARGLV
       . :.:  :.  ::::::::::::::::::::..:.:::::.:.:.:: .:.:.  ::  :
NP_000 LTGHWPLGATGCELWTSVDVLCVTASIETLCALAVDRYLAVTNPLRYGALVTKRCARTAV
      100       110       120       130       140       150        

     180       190       200        210       220       230        
pF1KE1 CTVWAISALVSFLPILMHWWRAESD-EARRCYNDPKCCDFVTNRAYAIASSVVSFYVPLC
         ::..:: ::: ::. .:::. .: ::.::...:.:: :..:  :.. :: ::::.:: 
NP_000 VLVWVVSAAVSFAPIMSQWWRVGADAEAQRCHSNPRCCAFASNMPYVLLSSSVSFYLPLL
      160       170       180       190       200       210        

      240       250       260       270        280       290       
pF1KE1 IMAFVYLRVFREAQKQVKKIDSCERRFLGGPAR-PPSPSPSPVPAPAPPPGPPRPAAAAA
       .: ::: :::  : .:.. . .   ::   : . ::.:: : .:::.   .::. . : .
NP_000 VMLFVYARVFVVATRQLRLLRGELGRF--PPEESPPAPSRSLAPAPVGTCAPPEGVPACG
      220       230       240         250       260       270      

       300       310       320       330       340       350       
pF1KE1 TAPLANGRAGKRRPSRLVALREQKALKTLGIIMGVFTLCWLPFFLANVVKAFHRE-LVPD
                  :::.::. :::..:: :::.:::.:::::::::::::..:.    ::: 
NP_000 -----------RRPARLLPLREHRALCTLGLIMGTFTLCWLPFFLANVLRALGGPSLVPG
                   280       290       300       310       320     

        360       370       380       390        400       410     
pF1KE1 RLFVFFNWLGYANSAFNPIIYCRSPDFRKAFQRLLC-CARRAARRRHATHGDRPR--ASG
         :. .::::::::::::.:::::::::.::.:::: :.::   .  :.   ::    ::
NP_000 PAFLALNWLGYANSAFNPLIYCRSPDFRSAFRRLLCRCGRRLPPEPCAAA--RPALFPSG
         330       340       350       360       370         380   

           420       430       440       450       460       470   
pF1KE1 CLARPGPPPSPGAASDDDDDDVVGATPPARLLEPWAGCNGGAAADSDSSLDEPCRPGFAS
         :  . : .:                                                 
NP_000 VPAARSSPAQPRLCQRLDGASWGVS                                   
           390       400                                           

>>NP_000854 (OMIM: 182131) 5-hydroxytryptamine receptor   (390 aa)
 initn: 588 init1: 352 opt: 690  Z-score: 427.9  bits: 88.3 E(85289): 4.3e-17
Smith-Waterman score: 690; 34.4% identity (62.6% similar) in 390 aa overlap (12-391:3-384)

               10        20         30        40        50         
pF1KE1 MGAGVLVLGASEPGNLSSAAPLPDGAAT-AARLLVPASPPASLLPPASESPEPLSQQWTA
                  :::  . : : : :. : . .  . ..:  .         . .:  : .
NP_000          MEEPGA-QCAPPPPAGSETWVPQANLSSAPSQNCSAKDYIYQDSISLPWKV
                         10        20        30        40        50

      60        70        80        90       100       110         
pF1KE1 GMGLLMALIVLLIVAGNVLVIVAIAKTPRLQTLTNLFIMSLASADLVMGLLVVPFGATIV
        . .:.:::.:  . .:..::... .: .:.: .: .: ::: .::....::.:...  .
NP_000 LLVMLLALITLATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYT
               60        70        80        90       100       110

     120       130       140       150       160       170         
pF1KE1 VWGRWEYGSFFCELWTSVDVLCVTASIETLCVIALDRYLAITSPFRYQSLLTRARARGLV
       : :::  :.  :..: : :. : ::::  ::::::::: :::.  .:..  :  ::  ..
NP_000 VTGRWTLGQVVCDFWLSSDITCCTASILHLCVIALDRYWAITDAVEYSAKRTPKRAAVMI
              120       130       140       150       160       170

     180       190       200       210       220       230         
pF1KE1 CTVWAISALVSFLPILMHWWRAESDEARRCYNDPKCCDFVTNRAYAIASSVVSFYVPLCI
         ::..:  .:. :.. .  .:: .:. .:  .    : .    :.. :.: .:: :  .
NP_000 ALVWVFSISISLPPFFWRQAKAE-EEVSECVVN---TDHIL---YTVYSTVGAFYFPTLL
              180       190        200             210       220   

     240       250         260       270        280        290     
pF1KE1 MAFVYLRVFREAQKQVKKI--DSCERRFLGGPARPPSP-SPSPVPA-PAPPPGPPRPAAA
       .  .: :.. ::.... :   .   .:.  .     :: : : : .  .  :  :  ...
NP_000 LIALYGRIYVEARSRILKQTPNRTGKRLTRAQLITDSPGSTSSVTSINSRVPDVPSESGS
           230       240       250       260       270       280   

         300         310       320       330       340       350   
pF1KE1 AATAPLANGRAGKR--RPSRLVALREQKALKTLGIIMGVFTLCWLPFFLANVVKAFHREL
        . .  .. :..    . ..:.: ::.:: ::::::.:.: .::::::. ..:  . .. 
NP_000 PVYVNQVKVRVSDALLEKKKLMAARERKATKTLGIILGAFIVCWLPFFIISLVMPICKDA
           290       300       310       320       330       340   

             360       370       380        390       400       410
pF1KE1 VPDRL--FVFFNWLGYANSAFNPIIYCRS-PDFRKAFQRLLCCARRAARRRHATHGDRPR
          .:  : ::.:::: :: .:::::  :  ::..::..:.                   
NP_000 CWFHLAIFDFFTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRFKCTS             
           350       360       370       380       390             

              420       430       440       450       460       470
pF1KE1 ASGCLARPGPPPSPGAASDDDDDDVVGATPPARLLEPWAGCNGGAAADSDSSLDEPCRPG

>>NP_000855 (OMIM: 182133) 5-hydroxytryptamine receptor   (377 aa)
 initn: 528 init1: 313 opt: 644  Z-score: 400.9  bits: 83.2 E(85289): 1.4e-15
Smith-Waterman score: 644; 34.6% identity (66.0% similar) in 356 aa overlap (47-391:26-371)

         20        30        40        50         60        70     
pF1KE1 SSAAPLPDGAATAARLLVPASPPASLLPPASESPEPLS-QQWTAGMGLLMALIVLLIVAG
                                     ::. .: . :    ........:.:  : .
NP_000      MSPLNQSAEGLPQEASNRSLNATETSEAWDPRTLQALKISLAVVLSVITLATVLS
                    10        20        30        40        50     

          80        90       100       110       120       130     
pF1KE1 NVLVIVAIAKTPRLQTLTNLFIMSLASADLVMGLLVVPFGATIVVWGRWEYGSFFCELWT
       :..:...:  : .:.: .: .: :::..::....::.:.. . ..   :..:...:..: 
NP_000 NAFVLTTILLTRKLHTPANYLIGSLATTDLLVSILVMPISIAYTITHTWNFGQILCDIWL
          60        70        80        90       100       110     

         140       150       160       170       180       190     
pF1KE1 SVDVLCVTASIETLCVIALDRYLAITSPFRYQSLLTRARARGLVCTVWAISALVSFLPIL
       : :. : ::::  ::::::::: :::. ..:..  : ..:  ..  :::::  .:. :..
NP_000 SSDITCCTASILHLCVIALDRYWAITDALEYSKRRTAGHAATMIAIVWAISICISIPPLF
         120       130       140       150       160       170     

         200       210       220       230       240       250     
pF1KE1 MHWWRAESDEARRCYNDPKCCDFVTNRAYAIASSVVSFYVPLCIMAFVYLRVFREAQKQV
         : .:...:    ..:  :   ... .:.: :.  .::.:  .. ..: :..: :....
NP_000 --WRQAKAQEE---MSD--CLVNTSQISYTIYSTCGAFYIPSVLLIILYGRIYRAARNRI
           180            190       200       210       220        

         260        270       280        290            300        
pF1KE1 KKIDSCE-RRFLGGPARPPSPSPSPVPAPAP-PPGPPRPAAAA-----ATAPLANGRAGK
        .  :   .::  .     : . :     .    :  . :..      .   ::.. : .
NP_000 LNPPSLYGKRFTTAHLITGSAGSSLCSLNSSLHEGHSHSAGSPLFFNHVKIKLADS-ALE
      230       240       250       260       270       280        

      310       320       330       340       350         360      
pF1KE1 RRPSRLVALREQKALKTLGIIMGVFTLCWLPFFLANVVKAFHRE--LVPDRLFVFFNWLG
       :.  :. : ::.:: : ::::.:.: .::::::....:  . :.   .   :: ::.:::
NP_000 RK--RISAARERKATKILGIILGAFIICWLPFFVVSLVLPICRDSCWIHPALFDFFTWLG
         290       300       310       320       330       340     

        370        380       390       400       410       420     
pF1KE1 YANSAFNPIIYCR-SPDFRKAFQRLLCCARRAARRRHATHGDRPRASGCLARPGPPPSPG
       : :: .:::::   . .::.:::...                                  
NP_000 YLNSLINPIIYTVFNEEFRQAFQKIVPFRKAS                            
         350       360       370                                   

>>NP_000856 (OMIM: 182132) 5-hydroxytryptamine receptor   (365 aa)
 initn: 576 init1: 343 opt: 634  Z-score: 395.1  bits: 82.1 E(85289): 2.9e-15
Smith-Waterman score: 634; 34.3% identity (61.8% similar) in 353 aa overlap (58-393:20-361)

        30        40        50        60        70          80     
pF1KE1 TAARLLVPASPPASLLPPASESPEPLSQQWTAGMGLLMALIVL--LIVAGNVLVIVAIAK
                                     :  : . :.:.:.  : .  :. ::.::. 
NP_000            MNITNCTTEASMAIRPKTITEKMLICMTLVVITTLTTLLNLAVIMAIGT
                          10        20        30        40         

          90       100       110       120       130       140     
pF1KE1 TPRLQTLTNLFIMSLASADLVMGLLVVPFGATIVVWGRWEYGSFFCELWTSVDVLCVTAS
       : .:.  .: .: ::: .::....::.:..   .:  ::. : :.::.: :::. : : :
NP_000 TKKLHQPANYLICSLAVTDLLVAVLVMPLSIIYIVMDRWKLGYFLCEVWLSVDMTCCTCS
      50        60        70        80        90       100         

         150       160       170       180       190       200     
pF1KE1 IETLCVIALDRYLAITSPFRYQSLLTRARARGLVCTVWAISALVSFLPILMHWWRAESDE
       :  ::::::::: :::. ..:    :  ::  .. :::.:: ..:. :..   ::..   
NP_000 ILHLCVIALDRYWAITNAIEYARKRTAKRAALMILTVWTISIFISMPPLF---WRSH---
     110       120       130       140       150          160      

         210       220        230       240       250       260    
pF1KE1 ARRCYNDPKCCDFVTNRA-YAIASSVVSFYVPLCIMAFVYLRVFREAQKQVKKIDSCERR
        ::    :. : .  ... :.: :.. .::.:: .. ..: :... :..  .:  :   :
NP_000 -RRLSPPPSQCTIQHDHVIYTIYSTLGAFYIPLTLILILYYRIYHAAKSLYQKRGSS--R
            170       180       190       200       210         220

          270                  280       290       300         310 
pF1KE1 FLGGPARPPSPS-----------PSPVPAPAPPPGPPRPAAAAATAPLANG--RAGKRRP
        :.. .   . :            :   .  :     .  :.    :. :   . :.:. 
NP_000 HLSNRSTDSQNSFASCKLTQTFCVSDFSTSDPTTEFEKFHASIRIPPFDNDLDHPGERQ-
              230       240       250       260       270          

             320       330       340       350       360       370 
pF1KE1 SRLVALREQKALKTLGIIMGVFTLCWLPFFLANVVKAFHRELVPDRLFVFFNWLGYANSA
        .. . ::.:: . ::.:.:.: : :::::. ... ..    : ...  :..::::.:: 
NP_000 -QISSTRERKAARILGLILGAFILSWLPFFIKELIVGLSIYTVSSEVADFLTWLGYVNSL
      280       290       300       310       320       330        

              380       390       400       410       420       430
pF1KE1 FNPIIYCR-SPDFRKAFQRLLCCARRAARRRHATHGDRPRASGCLARPGPPPSPGAASDD
       .::..:   . ::. ::..:. :                                     
NP_000 INPLLYTSFNEDFKLAFKKLIRCREHT                                 
      340       350       360                                      

>>XP_011534091 (OMIM: 182132) PREDICTED: 5-hydroxytrypta  (365 aa)
 initn: 576 init1: 343 opt: 634  Z-score: 395.1  bits: 82.1 E(85289): 2.9e-15
Smith-Waterman score: 634; 34.3% identity (61.8% similar) in 353 aa overlap (58-393:20-361)

        30        40        50        60        70          80     
pF1KE1 TAARLLVPASPPASLLPPASESPEPLSQQWTAGMGLLMALIVL--LIVAGNVLVIVAIAK
                                     :  : . :.:.:.  : .  :. ::.::. 
XP_011            MNITNCTTEASMAIRPKTITEKMLICMTLVVITTLTTLLNLAVIMAIGT
                          10        20        30        40         

          90       100       110       120       130       140     
pF1KE1 TPRLQTLTNLFIMSLASADLVMGLLVVPFGATIVVWGRWEYGSFFCELWTSVDVLCVTAS
       : .:.  .: .: ::: .::....::.:..   .:  ::. : :.::.: :::. : : :
XP_011 TKKLHQPANYLICSLAVTDLLVAVLVMPLSIIYIVMDRWKLGYFLCEVWLSVDMTCCTCS
      50        60        70        80        90       100         

         150       160       170       180       190       200     
pF1KE1 IETLCVIALDRYLAITSPFRYQSLLTRARARGLVCTVWAISALVSFLPILMHWWRAESDE
       :  ::::::::: :::. ..:    :  ::  .. :::.:: ..:. :..   ::..   
XP_011 ILHLCVIALDRYWAITNAIEYARKRTAKRAALMILTVWTISIFISMPPLF---WRSH---
     110       120       130       140       150          160      

         210       220        230       240       250       260    
pF1KE1 ARRCYNDPKCCDFVTNRA-YAIASSVVSFYVPLCIMAFVYLRVFREAQKQVKKIDSCERR
        ::    :. : .  ... :.: :.. .::.:: .. ..: :... :..  .:  :   :
XP_011 -RRLSPPPSQCTIQHDHVIYTIYSTLGAFYIPLTLILILYYRIYHAAKSLYQKRGSS--R
            170       180       190       200       210         220

          270                  280       290       300         310 
pF1KE1 FLGGPARPPSPS-----------PSPVPAPAPPPGPPRPAAAAATAPLANG--RAGKRRP
        :.. .   . :            :   .  :     .  :.    :. :   . :.:. 
XP_011 HLSNRSTDSQNSFASCKLTQTFCVSDFSTSDPTTEFEKFHASIRIPPFDNDLDHPGERQ-
              230       240       250       260       270          

             320       330       340       350       360       370 
pF1KE1 SRLVALREQKALKTLGIIMGVFTLCWLPFFLANVVKAFHRELVPDRLFVFFNWLGYANSA
        .. . ::.:: . ::.:.:.: : :::::. ... ..    : ...  :..::::.:: 
XP_011 -QISSTRERKAARILGLILGAFILSWLPFFIKELIVGLSIYTVSSEVADFLTWLGYVNSL
      280       290       300       310       320       330        

              380       390       400       410       420       430
pF1KE1 FNPIIYCR-SPDFRKAFQRLLCCARRAARRRHATHGDRPRASGCLARPGPPPSPGAASDD
       .::..:   . ::. ::..:. :                                     
XP_011 INPLLYTSFNEDFKLAFKKLIRCREHT                                 
      340       350       360                                      

>>NP_387512 (OMIM: 126451,181500,190300) D(3) dopamine r  (367 aa)
 initn: 476 init1: 160 opt: 604  Z-score: 377.4  bits: 78.8 E(85289): 2.8e-14
Smith-Waterman score: 604; 33.8% identity (62.8% similar) in 349 aa overlap (59-393:30-367)

       30        40        50        60        70        80        
pF1KE1 AARLLVPASPPASLLPPASESPEPLSQQWTAGMGLLMALIVLLIVAGNVLVIVAIAKTPR
                                     : ..: .  ..: :: :: :: .:. :   
NP_387  MASLSQLSGHLNYTCGAENSTGASQARPHAYYALSYCALILAIVFGNGLVCMAVLKERA
                10        20        30        40        50         

       90       100       110        120       130       140       
pF1KE1 LQTLTNLFIMSLASADLVMGLLVVPFGATI-VVWGRWEYGSFFCELWTSVDVLCVTASIE
       ::: :: ...::: :::... ::.:. . . :. : :... . :......::.  :::: 
NP_387 LQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVTLDVMMCTASIL
      60        70        80        90       100       110         

       150       160       170          180       190       200    
pF1KE1 TLCVIALDRYLAITSPFRYQSLLTRARARG---LVCTVWAISALVSFLPILMHWWRAESD
       .::.:..::: :.. : .::    ..  :    .. .::...  ::  :.:. .      
NP_387 NLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSC-PLLFGF------
     120       130       140       150       160        170        

          210       220       230       240       250       260    
pF1KE1 EARRCYNDPKCCDFVTNRAYAIASSVVSFYVPLCIMAFVYLRVFREAQKQVKKIDSCERR
             .::  :. ..:  ..: :::::::.:. . ..:: :..   ... .:    .. 
NP_387 ---NTTGDPTVCS-ISNPDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKRILTRQN
               180        190       200       210       220        

          270       280       290          300        310          
pF1KE1 FLGGPARPPSPSPSPVPAPAPPPGPPRPAAAAATA---PLANGRAGK-RRPSR----LVA
          . .::  :. .  : ::        .    ::   :  . :.:. .:  .    :. 
NP_387 SQCNSVRPGFPQQTLSPDPAHLELKRYYSICQDTALGGPGFQERGGELKREEKTRNSLMP
      230       240       250       260       270       280        

        320       330       340       350        360       370     
pF1KE1 LREQKALKTLGIIMGVFTLCWLPFFLANVVKAFHREL-VPDRLFVFFNWLGYANSAFNPI
       :::.:: . ..:..:.: .:::::::..:...  .   :  .:.   .::::.:::.::.
NP_387 LREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHVSPELYSATTWLGYVNSALNPV
      290       300       310       320       330       340        

          380       390       400       410       420       430    
pF1KE1 IYCR-SPDFRKAFQRLLCCARRAARRRHATHGDRPRASGCLARPGPPPSPGAASDDDDDD
       ::   . .::::: ..: :                                         
NP_387 IYTTFNIEFRKAFLKILSC                                         
      350       360                                                

>>NP_001309139 (OMIM: 182134) 5-hydroxytryptamine recept  (366 aa)
 initn: 589 init1: 289 opt: 571  Z-score: 357.9  bits: 75.2 E(85289): 3.4e-13
Smith-Waterman score: 571; 32.4% identity (61.9% similar) in 352 aa overlap (61-393:26-364)

               40        50        60        70        80        90
pF1KE1 RLLVPASPPASLLPPASESPEPLSQQWTAGMGLLMALIVLLIVAGNVLVIVAIAKTPRLQ
                                     ..: .. ..:. .. : :::.::  : .:.
NP_001      MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLH
                    10        20        30        40        50     

              100       110       120       130       140       150
pF1KE1 TLTNLFIMSLASADLVMGLLVVPFGATIVVWGRWEYGSFFCELWTSVDVLCVTASIETLC
         .: .: ::: .:.....::.::. . .:   : .:.  :..: :::. : : ::  : 
NP_001 HPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLS
          60        70        80        90       100       110     

              160       170       180       190       200       210
pF1KE1 VIALDRYLAITSPFRYQSLLTRARARGLVCTVWAISALVSFLPILMHWWRAESDEARRCY
       .:::::: :::.  .:    :  .:  ..  :: ::...:. :..   :: ..  .:   
NP_001 AIALDRYRAITDAVEYARKRTPKHAGIMITIVWIISVFISMPPLF---WRHQGT-SR---
         120       130       140       150       160               

                 220       230       240       250            260  
pF1KE1 NDPKCC---DFVTNRAYAIASSVVSFYVPLCIMAFVYLRVFREAQ-----KQVKKIDSCE
        : .:    : ...  :   :.  .::.:: .. ..: ...: :.     .:...: . :
NP_001 -DDECIIKHDHIVSTIY---STFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEE
       170       180          190       200       210       220    

                270       280            290       300       310   
pF1KE1 ---RRFL-GGPARPPSPSPSPV-----PAPAPPPGPPRPAAAAATAPLANGRAGKRRPSR
          . .: .:     : : : :       :.      . .. .  . . . .. .:.  .
NP_001 VNGQVLLESGEKSTKSVSTSYVLEKSLSDPSTDFDKIHSTVRSLRSEFKHEKSWRRQ--K
          230       240       250       260       270       280    

           320       330       340        350       360       370  
pF1KE1 LVALREQKALKTLGIIMGVFTLCWLPFFLAN-VVKAFHRELVPDRLFVFFNWLGYANSAF
       . . ::.::  :::.:.:.:..::::::. . ::..  .  . ...  :. :::: :: .
NP_001 ISGTRERKAATTLGLILGAFVICWLPFFVKELVVNVCDKCKISEEMSNFLAWLGYLNSLI
            290       300       310       320       330       340  

             380       390       400       410       420       430 
pF1KE1 NPIIYC-RSPDFRKAFQRLLCCARRAARRRHATHGDRPRASGCLARPGPPPSPGAASDDD
       ::.::   . ::.::::.:. :                                      
NP_001 NPLIYTIFNEDFKKAFQKLVRCRC                                    
            350       360                                          

>>NP_001309137 (OMIM: 182134) 5-hydroxytryptamine recept  (366 aa)
 initn: 589 init1: 289 opt: 571  Z-score: 357.9  bits: 75.2 E(85289): 3.4e-13
Smith-Waterman score: 571; 32.4% identity (61.9% similar) in 352 aa overlap (61-393:26-364)

               40        50        60        70        80        90
pF1KE1 RLLVPASPPASLLPPASESPEPLSQQWTAGMGLLMALIVLLIVAGNVLVIVAIAKTPRLQ
                                     ..: .. ..:. .. : :::.::  : .:.
NP_001      MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLH
                    10        20        30        40        50     

              100       110       120       130       140       150
pF1KE1 TLTNLFIMSLASADLVMGLLVVPFGATIVVWGRWEYGSFFCELWTSVDVLCVTASIETLC
         .: .: ::: .:.....::.::. . .:   : .:.  :..: :::. : : ::  : 
NP_001 HPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLS
          60        70        80        90       100       110     

              160       170       180       190       200       210
pF1KE1 VIALDRYLAITSPFRYQSLLTRARARGLVCTVWAISALVSFLPILMHWWRAESDEARRCY
       .:::::: :::.  .:    :  .:  ..  :: ::...:. :..   :: ..  .:   
NP_001 AIALDRYRAITDAVEYARKRTPKHAGIMITIVWIISVFISMPPLF---WRHQGT-SR---
         120       130       140       150       160               

                 220       230       240       250            260  
pF1KE1 NDPKCC---DFVTNRAYAIASSVVSFYVPLCIMAFVYLRVFREAQ-----KQVKKIDSCE
        : .:    : ...  :   :.  .::.:: .. ..: ...: :.     .:...: . :
NP_001 -DDECIIKHDHIVSTIY---STFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEE
       170       180          190       200       210       220    

                270       280            290       300       310   
pF1KE1 ---RRFL-GGPARPPSPSPSPV-----PAPAPPPGPPRPAAAAATAPLANGRAGKRRPSR
          . .: .:     : : : :       :.      . .. .  . . . .. .:.  .
NP_001 VNGQVLLESGEKSTKSVSTSYVLEKSLSDPSTDFDKIHSTVRSLRSEFKHEKSWRRQ--K
          230       240       250       260       270       280    

           320       330       340        350       360       370  
pF1KE1 LVALREQKALKTLGIIMGVFTLCWLPFFLAN-VVKAFHRELVPDRLFVFFNWLGYANSAF
       . . ::.::  :::.:.:.:..::::::. . ::..  .  . ...  :. :::: :: .
NP_001 ISGTRERKAATTLGLILGAFVICWLPFFVKELVVNVCDKCKISEEMSNFLAWLGYLNSLI
            290       300       310       320       330       340  

             380       390       400       410       420       430 
pF1KE1 NPIIYC-RSPDFRKAFQRLLCCARRAARRRHATHGDRPRASGCLARPGPPPSPGAASDDD
       ::.::   . ::.::::.:. :                                      
NP_001 NPLIYTIFNEDFKKAFQKLVRCRC                                    
            350       360                                          




477 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 07:58:36 2016 done: Sun Nov  6 07:58:38 2016
 Total Scan time: 11.210 Total Display time:  0.040

Function used was FASTA [36.3.4 Apr, 2011]
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