FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1982, 558 aa 1>>>pF1KE1982 558 - 558 aa - 558 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6568+/-0.00094; mu= 16.6354+/- 0.057 mean_var=65.6640+/-13.207, 0's: 0 Z-trim(105.1): 19 B-trim: 0 in 0/50 Lambda= 0.158274 statistics sampled from 8257 (8265) to 8257 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.617), E-opt: 0.2 (0.254), width: 16 Scan time: 2.520 The best scores are: opt bits E(32554) CCDS7382.1 GLUD1 gene_id:2746|Hs108|chr10 ( 558) 3708 855.8 0 CCDS14603.1 GLUD2 gene_id:2747|Hs108|chrX ( 558) 3548 819.2 0 >>CCDS7382.1 GLUD1 gene_id:2746|Hs108|chr10 (558 aa) initn: 3708 init1: 3708 opt: 3708 Z-score: 4571.9 bits: 855.8 E(32554): 0 Smith-Waterman score: 3708; 100.0% identity (100.0% similar) in 558 aa overlap (1-558:1-558) 10 20 30 40 50 60 pF1KE1 MYRYLGEALLLSRAGPAALGSASADSAALLGWARGQPAAAPQPGLALAARRHYSEAVADR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 MYRYLGEALLLSRAGPAALGSASADSAALLGWARGQPAAAPQPGLALAARRHYSEAVADR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 EDDPNFFKMVEGFFDRGASIVEDKLVEDLRTRESEEQKRNRVRGILRIIKPCNHVLSLSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 EDDPNFFKMVEGFFDRGASIVEDKLVEDLRTRESEEQKRNRVRGILRIIKPCNHVLSLSF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 PIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 PIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 GAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGIDVPAPDMSTGEREMSWIADTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 GAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGIDVPAPDMSTGEREMSWIADTY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 ASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 ASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 DKTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWNPDGIDPKELEDFKLQHGSILG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 DKTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWNPDGIDPKELEDFKLQHGSILG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 FPKAKPYEGSILEADCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 FPKAKPYEGSILEADCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLER 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 NIMVIPDLYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSNYHLLMSVQESLERKFGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 NIMVIPDLYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSNYHLLMSVQESLERKFGK 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE1 HGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYNLGLDLRTAAYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 HGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYNLGLDLRTAAYV 490 500 510 520 530 540 550 pF1KE1 NAIEKVFKVYNEAGVTFT :::::::::::::::::: CCDS73 NAIEKVFKVYNEAGVTFT 550 >>CCDS14603.1 GLUD2 gene_id:2747|Hs108|chrX (558 aa) initn: 3548 init1: 3548 opt: 3548 Z-score: 4374.5 bits: 819.2 E(32554): 0 Smith-Waterman score: 3548; 95.7% identity (98.6% similar) in 558 aa overlap (1-558:1-558) 10 20 30 40 50 60 pF1KE1 MYRYLGEALLLSRAGPAALGSASADSAALLGWARGQPAAAPQPGLALAARRHYSEAVADR :::::..::: :::::::::::. :::::: .::::::: :::::::::::::: :::: CCDS14 MYRYLAKALLPSRAGPAALGSAANHSAALLGRGRGQPAAASQPGLALAARRHYSELVADR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 EDDPNFFKMVEGFFDRGASIVEDKLVEDLRTRESEEQKRNRVRGILRIIKPCNHVLSLSF ::::::::::::::::::::::::::.::::.:::::::::::::::::::::::::::: CCDS14 EDDPNFFKMVEGFFDRGASIVEDKLVKDLRTQESEEQKRNRVRGILRIIKPCNHVLSLSF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 PIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 PIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 GAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGIDVPAPDMSTGEREMSWIADTY ::::::::::::::.:::::::::::::::::::::::.:::::::.::::::::::::: CCDS14 GAKAGVKINPKNYTENELEKITRRFTMELAKKGFIGPGVDVPAPDMNTGEREMSWIADTY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 ASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 ASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFR 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 DKTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWNPDGIDPKELEDFKLQHGSILG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 DKTFVVQGFGNVGLHSMRYLHRFGAKCIAVGESDGSIWNPDGIDPKELEDFKLQHGSILG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 FPKAKPYEGSILEADCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLER :::::::::::::.:::::::::.:::::::::::::::::::::::::::::::::::: CCDS14 FPKAKPYEGSILEVDCDILIPAATEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLER 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 NIMVIPDLYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSNYHLLMSVQESLERKFGK ::.::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: CCDS14 NILVIPDLYLNAGGVTVSYFEWLKNLNHVSYGRLTFKYERDSNYHLLLSVQESLERKFGK 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE1 HGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYNLGLDLRTAAYV ::::::::::::::: ::::::::::::.:::::::::::::.::::::::::::::::: CCDS14 HGGTIPIVPTAEFQDSISGASEKDIVHSALAYTMERSARQIMHTAMKYNLGLDLRTAAYV 490 500 510 520 530 540 550 pF1KE1 NAIEKVFKVYNEAGVTFT ::::::::::.::::::: CCDS14 NAIEKVFKVYSEAGVTFT 550 558 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:24:33 2016 done: Sun Nov 6 15:24:34 2016 Total Scan time: 2.520 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]