FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1870, 391 aa 1>>>pF1KE1870 391 - 391 aa - 391 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3588+/-0.000408; mu= 16.8228+/- 0.025 mean_var=67.0532+/-13.387, 0's: 0 Z-trim(111.9): 55 B-trim: 0 in 0/49 Lambda= 0.156626 statistics sampled from 20567 (20622) to 20567 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.615), E-opt: 0.2 (0.242), width: 16 Scan time: 8.360 The best scores are: opt bits E(85289) NP_004403 (OMIM: 602478) tRNA (cytosine(38)-C(5))- ( 391) 2543 583.7 2.5e-166 XP_006717451 (OMIM: 602478) PREDICTED: tRNA (cytos ( 384) 2469 567.0 2.7e-161 XP_005252429 (OMIM: 602478) PREDICTED: tRNA (cytos ( 377) 2350 540.1 3.3e-153 XP_005252431 (OMIM: 602478) PREDICTED: tRNA (cytos ( 359) 2345 538.9 6.9e-153 XP_016871292 (OMIM: 602478) PREDICTED: tRNA (cytos ( 320) 2082 479.5 4.9e-135 XP_016871294 (OMIM: 602478) PREDICTED: tRNA (cytos ( 320) 2082 479.5 4.9e-135 XP_016871293 (OMIM: 602478) PREDICTED: tRNA (cytos ( 320) 2082 479.5 4.9e-135 NP_001307936 (OMIM: 602478) tRNA (cytosine(38)-C(5 ( 320) 2082 479.5 4.9e-135 XP_016871291 (OMIM: 602478) PREDICTED: tRNA (cytos ( 320) 2082 479.5 4.9e-135 XP_016871295 (OMIM: 602478) PREDICTED: tRNA (cytos ( 313) 2008 462.8 5.2e-130 XP_011517647 (OMIM: 602478) PREDICTED: tRNA (cytos ( 332) 1986 457.8 1.7e-128 XP_011517646 (OMIM: 602478) PREDICTED: tRNA (cytos ( 332) 1986 457.8 1.7e-128 XP_005252435 (OMIM: 602478) PREDICTED: tRNA (cytos ( 306) 1889 435.9 6.3e-122 XP_016871296 (OMIM: 602478) PREDICTED: tRNA (cytos ( 299) 1815 419.1 6.7e-117 XP_016871297 (OMIM: 602478) PREDICTED: tRNA (cytos ( 299) 1815 419.1 6.7e-117 XP_016871300 (OMIM: 602478) PREDICTED: tRNA (cytos ( 274) 1708 394.9 1.2e-109 XP_016871301 (OMIM: 602478) PREDICTED: tRNA (cytos ( 274) 1708 394.9 1.2e-109 XP_005252432 (OMIM: 602478) PREDICTED: tRNA (cytos ( 345) 1708 395.0 1.4e-109 NP_001307935 (OMIM: 602478) tRNA (cytosine(38)-C(5 ( 310) 1703 393.8 2.9e-109 XP_011517645 (OMIM: 602478) PREDICTED: tRNA (cytos ( 369) 1703 393.9 3.3e-109 XP_016871298 (OMIM: 602478) PREDICTED: tRNA (cytos ( 286) 1699 392.9 5e-109 XP_016871289 (OMIM: 602478) PREDICTED: tRNA (cytos ( 338) 1634 378.3 1.5e-104 XP_016871290 (OMIM: 602478) PREDICTED: tRNA (cytos ( 331) 1515 351.4 1.9e-96 XP_016871299 (OMIM: 602478) PREDICTED: tRNA (cytos ( 284) 1510 350.2 3.6e-96 NP_001305660 (OMIM: 126375,604121,614116) DNA (cyt (1511) 162 46.0 0.00072 NP_001370 (OMIM: 126375,604121,614116) DNA (cytosi (1616) 162 46.0 0.00076 NP_001305659 (OMIM: 126375,604121,614116) DNA (cyt (1619) 162 46.0 0.00076 NP_001124295 (OMIM: 126375,604121,614116) DNA (cyt (1632) 162 46.0 0.00077 >>NP_004403 (OMIM: 602478) tRNA (cytosine(38)-C(5))-meth (391 aa) initn: 2543 init1: 2543 opt: 2543 Z-score: 3107.0 bits: 583.7 E(85289): 2.5e-166 Smith-Waterman score: 2543; 99.7% identity (100.0% similar) in 391 aa overlap (1-391:1-391) 10 20 30 40 50 60 pF1KE1 MEPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 MEPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 TLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLYILDILPRLQKLPKYILLEN ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: NP_004 TLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLEN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 VKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 VKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 QVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 QVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 KNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 KNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSY 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 IEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 IEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGF 310 320 330 340 350 360 370 380 390 pF1KE1 PEKITVKQRYRLLGNSLNVHVVAKLIKILYE ::::::::::::::::::::::::::::::: NP_004 PEKITVKQRYRLLGNSLNVHVVAKLIKILYE 370 380 390 >>XP_006717451 (OMIM: 602478) PREDICTED: tRNA (cytosine( (384 aa) initn: 1918 init1: 1918 opt: 2469 Z-score: 3016.7 bits: 567.0 E(85289): 2.7e-161 Smith-Waterman score: 2469; 98.0% identity (98.2% similar) in 391 aa overlap (1-391:1-384) 10 20 30 40 50 60 pF1KE1 MEPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MEPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 TLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLYILDILPRLQKLPKYILLEN ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: XP_006 TLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLEN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 VKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 VKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 QVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 QVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 KNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSY ::::::::::::::::::::::::::::::::::::::::::::::::: :::: XP_006 KNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRR-------YGSY 250 260 270 280 290 310 320 330 340 350 360 pF1KE1 IEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 IEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGF 300 310 320 330 340 350 370 380 390 pF1KE1 PEKITVKQRYRLLGNSLNVHVVAKLIKILYE ::::::::::::::::::::::::::::::: XP_006 PEKITVKQRYRLLGNSLNVHVVAKLIKILYE 360 370 380 >>XP_005252429 (OMIM: 602478) PREDICTED: tRNA (cytosine( (377 aa) initn: 2350 init1: 2350 opt: 2350 Z-score: 2871.5 bits: 540.1 E(85289): 3.3e-153 Smith-Waterman score: 2350; 97.0% identity (97.8% similar) in 372 aa overlap (1-372:1-372) 10 20 30 40 50 60 pF1KE1 MEPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MEPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 TLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLYILDILPRLQKLPKYILLEN ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: XP_005 TLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLEN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 VKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 QVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 KNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 KNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSY 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 IEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 IEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFDE 310 320 330 340 350 360 370 380 390 pF1KE1 PEKITVKQRYRLLGNSLNVHVVAKLIKILYE : .: . :: XP_005 QSDILLKTEKRLTIQLK 370 >>XP_005252431 (OMIM: 602478) PREDICTED: tRNA (cytosine( (359 aa) initn: 2345 init1: 2345 opt: 2345 Z-score: 2865.8 bits: 538.9 E(85289): 6.9e-153 Smith-Waterman score: 2345; 99.7% identity (100.0% similar) in 359 aa overlap (1-359:1-359) 10 20 30 40 50 60 pF1KE1 MEPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MEPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 TLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLYILDILPRLQKLPKYILLEN ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: XP_005 TLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLEN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 VKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQAPG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 QVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEIHR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 KNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 KNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTKGYGSY 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 IEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFGF ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 IEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLLGFPPEFG 310 320 330 340 350 370 380 390 pF1KE1 PEKITVKQRYRLLGNSLNVHVVAKLIKILYE >>XP_016871292 (OMIM: 602478) PREDICTED: tRNA (cytosine( (320 aa) initn: 2082 init1: 2082 opt: 2082 Z-score: 2545.3 bits: 479.5 E(85289): 4.9e-135 Smith-Waterman score: 2082; 99.7% identity (100.0% similar) in 320 aa overlap (72-391:1-320) 50 60 70 80 90 100 pF1KE1 VYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLY :::::::::::::::::::::::::::::. XP_016 MILMSPPCQPFTRIGRQGDMTDSRTNSFLH 10 20 30 110 120 130 140 150 160 pF1KE1 ILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRL 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE1 RYFLIAKLQSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RYFLIAKLQSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQ 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE1 CSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLD 160 170 180 190 200 210 290 300 310 320 330 340 pF1KE1 IVQPTCRRSVCFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 IVQPTCRRSVCFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLR 220 230 240 250 260 270 350 360 370 380 390 pF1KE1 YFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE :::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE 280 290 300 310 320 >>XP_016871294 (OMIM: 602478) PREDICTED: tRNA (cytosine( (320 aa) initn: 2082 init1: 2082 opt: 2082 Z-score: 2545.3 bits: 479.5 E(85289): 4.9e-135 Smith-Waterman score: 2082; 99.7% identity (100.0% similar) in 320 aa overlap (72-391:1-320) 50 60 70 80 90 100 pF1KE1 VYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLY :::::::::::::::::::::::::::::. XP_016 MILMSPPCQPFTRIGRQGDMTDSRTNSFLH 10 20 30 110 120 130 140 150 160 pF1KE1 ILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRL 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE1 RYFLIAKLQSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RYFLIAKLQSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQ 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE1 CSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLD 160 170 180 190 200 210 290 300 310 320 330 340 pF1KE1 IVQPTCRRSVCFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 IVQPTCRRSVCFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLR 220 230 240 250 260 270 350 360 370 380 390 pF1KE1 YFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE :::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE 280 290 300 310 320 >>XP_016871293 (OMIM: 602478) PREDICTED: tRNA (cytosine( (320 aa) initn: 2082 init1: 2082 opt: 2082 Z-score: 2545.3 bits: 479.5 E(85289): 4.9e-135 Smith-Waterman score: 2082; 99.7% identity (100.0% similar) in 320 aa overlap (72-391:1-320) 50 60 70 80 90 100 pF1KE1 VYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLY :::::::::::::::::::::::::::::. XP_016 MILMSPPCQPFTRIGRQGDMTDSRTNSFLH 10 20 30 110 120 130 140 150 160 pF1KE1 ILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRL 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE1 RYFLIAKLQSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RYFLIAKLQSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQ 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE1 CSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLD 160 170 180 190 200 210 290 300 310 320 330 340 pF1KE1 IVQPTCRRSVCFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 IVQPTCRRSVCFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLR 220 230 240 250 260 270 350 360 370 380 390 pF1KE1 YFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE :::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE 280 290 300 310 320 >>NP_001307936 (OMIM: 602478) tRNA (cytosine(38)-C(5))-m (320 aa) initn: 2082 init1: 2082 opt: 2082 Z-score: 2545.3 bits: 479.5 E(85289): 4.9e-135 Smith-Waterman score: 2082; 99.7% identity (100.0% similar) in 320 aa overlap (72-391:1-320) 50 60 70 80 90 100 pF1KE1 VYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLY :::::::::::::::::::::::::::::. NP_001 MILMSPPCQPFTRIGRQGDMTDSRTNSFLH 10 20 30 110 120 130 140 150 160 pF1KE1 ILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRL 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE1 RYFLIAKLQSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RYFLIAKLQSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQ 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE1 CSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 CSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLD 160 170 180 190 200 210 290 300 310 320 330 340 pF1KE1 IVQPTCRRSVCFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IVQPTCRRSVCFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLR 220 230 240 250 260 270 350 360 370 380 390 pF1KE1 YFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE :::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE 280 290 300 310 320 >>XP_016871291 (OMIM: 602478) PREDICTED: tRNA (cytosine( (320 aa) initn: 2082 init1: 2082 opt: 2082 Z-score: 2545.3 bits: 479.5 E(85289): 4.9e-135 Smith-Waterman score: 2082; 99.7% identity (100.0% similar) in 320 aa overlap (72-391:1-320) 50 60 70 80 90 100 pF1KE1 VYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLY :::::::::::::::::::::::::::::. XP_016 MILMSPPCQPFTRIGRQGDMTDSRTNSFLH 10 20 30 110 120 130 140 150 160 pF1KE1 ILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRL 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE1 RYFLIAKLQSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RYFLIAKLQSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQ 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE1 CSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLD 160 170 180 190 200 210 290 300 310 320 330 340 pF1KE1 IVQPTCRRSVCFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 IVQPTCRRSVCFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLR 220 230 240 250 260 270 350 360 370 380 390 pF1KE1 YFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE :::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE 280 290 300 310 320 >>XP_016871295 (OMIM: 602478) PREDICTED: tRNA (cytosine( (313 aa) initn: 1457 init1: 1457 opt: 2008 Z-score: 2455.1 bits: 462.8 E(85289): 5.2e-130 Smith-Waterman score: 2008; 97.5% identity (97.8% similar) in 320 aa overlap (72-391:1-313) 50 60 70 80 90 100 pF1KE1 VYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLY :::::::::::::::::::::::::::::. XP_016 MILMSPPCQPFTRIGRQGDMTDSRTNSFLH 10 20 30 110 120 130 140 150 160 pF1KE1 ILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRL 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE1 RYFLIAKLQSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RYFLIAKLQSEPLPFQAPGQVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQ 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE1 CSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CSGKDAILFKLETAEEIHRKNQQDSDLSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLD 160 170 180 190 200 210 290 300 310 320 330 340 pF1KE1 IVQPTCRRSVCFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLR :::::::: ::::::::::::::::::::::::::::::::::::::::::::: XP_016 IVQPTCRR-------YGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLR 220 230 240 250 260 350 360 370 380 390 pF1KE1 YFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE :::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE 270 280 290 300 310 391 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 05:43:41 2016 done: Sun Nov 6 05:43:42 2016 Total Scan time: 8.360 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]