Result of FASTA (ccds) for pFN21AB7693
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7693, 350 aa
  1>>>pF1KB7693 350 - 350 aa - 350 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 9.2307+/-0.00082; mu= 1.4430+/- 0.049
 mean_var=337.2785+/-73.766, 0's: 0 Z-trim(117.7): 664  B-trim: 0 in 0/53
 Lambda= 0.069836
 statistics sampled from 17637 (18452) to 17637 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.836), E-opt: 0.2 (0.567), width:  16
 Scan time:  2.940

The best scores are:                                      opt bits E(32554)
CCDS6718.1 ZNF367 gene_id:195828|Hs108|chr9        ( 350) 2448 259.6 2.8e-69


>>CCDS6718.1 ZNF367 gene_id:195828|Hs108|chr9             (350 aa)
 initn: 2448 init1: 2448 opt: 2448  Z-score: 1357.2  bits: 259.6 E(32554): 2.8e-69
Smith-Waterman score: 2448; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)

               10        20        30        40        50        60
pF1KB7 MIRGFEAPMAENPPPPPPPVIFCHDSPKRVLVSVIRTTPIKPTCGGGGEPEPPPPLIPTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 MIRGFEAPMAENPPPPPPPVIFCHDSPKRVLVSVIRTTPIKPTCGGGGEPEPPPPLIPTS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 PGFSDFMVYPWRWGENAHNVTLSPGAAGAAASAALPAAAAAEHSGLRGRGAPPPAASASA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 PGFSDFMVYPWRWGENAHNVTLSPGAAGAAASAALPAAAAAEHSGLRGRGAPPPAASASA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 AASGGEDEEEASSPDSGHLKDGIRRGRPRADTVRDLINEGEHSSSRIRCNICNRVFPREK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 AASGGEDEEEASSPDSGHLKDGIRRGRPRADTVRDLINEGEHSSSRIRCNICNRVFPREK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 SLQAHKRTHTGERPYLCDYPDCGKAFVQSGQLKTHQRLHTGEKPFVCSENGCLSRFTHAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 SLQAHKRTHTGERPYLCDYPDCGKAFVQSGQLKTHQRLHTGEKPFVCSENGCLSRFTHAN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 RHCPKHPYARLKREEPTDTLSKHQAADNKAAAEWLARYWEMREQRTPTLKGKLVQKADQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 RHCPKHPYARLKREEPTDTLSKHQAADNKAAAEWLARYWEMREQRTPTLKGKLVQKADQE
              250       260       270       280       290       300

              310       320       330       340       350
pF1KB7 QQDPLEYLQSDEEDDEKRGAQRRLQEQRERLHGALALIELANLTGAPLRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 QQDPLEYLQSDEEDDEKRGAQRRLQEQRERLHGALALIELANLTGAPLRQ
              310       320       330       340       350




350 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 05:28:11 2016 done: Sun Nov  6 05:28:11 2016
 Total Scan time:  2.940 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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