FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6473, 453 aa 1>>>pF1KE6473 453 - 453 aa - 453 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0514+/-0.000357; mu= 14.9390+/- 0.022 mean_var=101.8501+/-20.034, 0's: 0 Z-trim(116.5): 23 B-trim: 217 in 1/51 Lambda= 0.127085 statistics sampled from 27694 (27717) to 27694 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.696), E-opt: 0.2 (0.325), width: 16 Scan time: 9.050 The best scores are: opt bits E(85289) NP_689485 (OMIM: 611130) charged multivesicular bo ( 453) 2941 549.8 5.5e-156 XP_016869450 (OMIM: 611130) PREDICTED: charged mul ( 495) 2823 528.2 1.9e-149 XP_006716478 (OMIM: 611130) PREDICTED: charged mul ( 429) 2294 431.2 2.7e-120 XP_016869453 (OMIM: 611130) PREDICTED: charged mul ( 343) 2189 411.8 1.4e-114 NP_001304828 (OMIM: 611130) charged multivesicular ( 343) 2189 411.8 1.4e-114 XP_016869451 (OMIM: 611130) PREDICTED: charged mul ( 385) 2071 390.2 5e-108 XP_016869452 (OMIM: 611130) PREDICTED: charged mul ( 385) 2071 390.2 5e-108 XP_016869454 (OMIM: 611130) PREDICTED: charged mul ( 319) 1542 293.2 6.9e-79 NP_078867 (OMIM: 610901) charged multivesicular bo ( 201) 246 55.4 1.6e-07 XP_005257725 (OMIM: 610901) PREDICTED: charged mul ( 245) 233 53.1 9.9e-07 NP_689497 (OMIM: 610899) charged multivesicular bo ( 233) 218 50.3 6.4e-06 NP_789782 (OMIM: 605387,610897) charged multivesic ( 224) 208 48.5 2.2e-05 NP_054888 (OMIM: 610051) charged multivesicular bo ( 265) 203 47.6 4.7e-05 NP_057494 (OMIM: 610900) charged multivesicular bo ( 219) 168 41.1 0.0035 >>NP_689485 (OMIM: 611130) charged multivesicular body p (453 aa) initn: 2941 init1: 2941 opt: 2941 Z-score: 2921.5 bits: 549.8 E(85289): 5.5e-156 Smith-Waterman score: 2941; 100.0% identity (100.0% similar) in 453 aa overlap (1-453:1-453) 10 20 30 40 50 60 pF1KE6 MWSPEREAEAPAGGDPAGLLPPEWEEDEERMSFLFSAFKRSREVNSTDWDSKMGFWAPLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 MWSPEREAEAPAGGDPAGLLPPEWEEDEERMSFLFSAFKRSREVNSTDWDSKMGFWAPLV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 LSHSRRQGVVRLRLRDLQEAFQRKGSVPLGLATVLQDLLRRGELQRESDFMASVDSSWIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 LSHSRRQGVVRLRLRDLQEAFQRKGSVPLGLATVLQDLLRRGELQRESDFMASVDSSWIS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 WGVGVFLLKPLKWTLSNMLGDNKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 WGVGVFLLKPLKWTLSNMLGDNKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVAL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 SELSTLCANSCPDERTFYLVLLQLQKEKRVTVLEQNGEKIVKFARGPRAKVSPVNDVDVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 SELSTLCANSCPDERTFYLVLLQLQKEKRVTVLEQNGEKIVKFARGPRAKVSPVNDVDVG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 VYQLMQSEQLLSRKVESLSQEAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 VYQLMQSEQLLSRKVESLSQEAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 KLDTVQGILDRIYASQTDQMVFNAYQAGVGALKLSMKDVTVEKAESLVDQIQELCDTQDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 KLDTVQGILDRIYASQTDQMVFNAYQAGVGALKLSMKDVTVEKAESLVDQIQELCDTQDE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 VSQTLAGGVTNGLDFDSEELEKELDILLQDTTKEPLDLPDNPRNRHFTNSVPNPRISDAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 VSQTLAGGVTNGLDFDSEELEKELDILLQDTTKEPLDLPDNPRNRHFTNSVPNPRISDAE 370 380 390 400 410 420 430 440 450 pF1KE6 LEAELEKLSLSEGGLVPSSKSPKRQLEPTLKPL ::::::::::::::::::::::::::::::::: NP_689 LEAELEKLSLSEGGLVPSSKSPKRQLEPTLKPL 430 440 450 >>XP_016869450 (OMIM: 611130) PREDICTED: charged multive (495 aa) initn: 2823 init1: 2823 opt: 2823 Z-score: 2804.0 bits: 528.2 E(85289): 1.9e-149 Smith-Waterman score: 2823; 98.9% identity (99.3% similar) in 441 aa overlap (1-441:1-441) 10 20 30 40 50 60 pF1KE6 MWSPEREAEAPAGGDPAGLLPPEWEEDEERMSFLFSAFKRSREVNSTDWDSKMGFWAPLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MWSPEREAEAPAGGDPAGLLPPEWEEDEERMSFLFSAFKRSREVNSTDWDSKMGFWAPLV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 LSHSRRQGVVRLRLRDLQEAFQRKGSVPLGLATVLQDLLRRGELQRESDFMASVDSSWIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LSHSRRQGVVRLRLRDLQEAFQRKGSVPLGLATVLQDLLRRGELQRESDFMASVDSSWIS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 WGVGVFLLKPLKWTLSNMLGDNKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 WGVGVFLLKPLKWTLSNMLGDNKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVAL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 SELSTLCANSCPDERTFYLVLLQLQKEKRVTVLEQNGEKIVKFARGPRAKVSPVNDVDVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SELSTLCANSCPDERTFYLVLLQLQKEKRVTVLEQNGEKIVKFARGPRAKVSPVNDVDVG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 VYQLMQSEQLLSRKVESLSQEAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VYQLMQSEQLLSRKVESLSQEAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 KLDTVQGILDRIYASQTDQMVFNAYQAGVGALKLSMKDVTVEKAESLVDQIQELCDTQDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KLDTVQGILDRIYASQTDQMVFNAYQAGVGALKLSMKDVTVEKAESLVDQIQELCDTQDE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 VSQTLAGGVTNGLDFDSEELEKELDILLQDTTKEPLDLPDNPRNRHFTNSVPNPRISDAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VSQTLAGGVTNGLDFDSEELEKELDILLQDTTKEPLDLPDNPRNRHFTNSVPNPRISDAE 370 380 390 400 410 420 430 440 450 pF1KE6 LEAELEKLSLSEGGLVPSSKSPKRQLEPTLKPL ::::::::::::::. ::. XP_016 LEAELEKLSLSEGGMELFSKAFGGHMAFWLTELMGPSPITPFARVPEPCRELRVVYIKTQ 430 440 450 460 470 480 >>XP_006716478 (OMIM: 611130) PREDICTED: charged multive (429 aa) initn: 2294 init1: 2294 opt: 2294 Z-score: 2280.7 bits: 431.2 E(85289): 2.7e-120 Smith-Waterman score: 2294; 98.3% identity (99.4% similar) in 359 aa overlap (1-359:1-359) 10 20 30 40 50 60 pF1KE6 MWSPEREAEAPAGGDPAGLLPPEWEEDEERMSFLFSAFKRSREVNSTDWDSKMGFWAPLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MWSPEREAEAPAGGDPAGLLPPEWEEDEERMSFLFSAFKRSREVNSTDWDSKMGFWAPLV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 LSHSRRQGVVRLRLRDLQEAFQRKGSVPLGLATVLQDLLRRGELQRESDFMASVDSSWIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 LSHSRRQGVVRLRLRDLQEAFQRKGSVPLGLATVLQDLLRRGELQRESDFMASVDSSWIS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 WGVGVFLLKPLKWTLSNMLGDNKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 WGVGVFLLKPLKWTLSNMLGDNKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVAL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 SELSTLCANSCPDERTFYLVLLQLQKEKRVTVLEQNGEKIVKFARGPRAKVSPVNDVDVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SELSTLCANSCPDERTFYLVLLQLQKEKRVTVLEQNGEKIVKFARGPRAKVSPVNDVDVG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 VYQLMQSEQLLSRKVESLSQEAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 VYQLMQSEQLLSRKVESLSQEAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 KLDTVQGILDRIYASQTDQMVFNAYQAGVGALKLSMKDVTVEKAESLVDQIQELCDTQDE :::::::::::::::::::::::::::::::::::::::::::::::::::::. ... XP_006 KLDTVQGILDRIYASQTDQMVFNAYQAGVGALKLSMKDVTVEKAESLVDQIQEILTVKNW 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 VSQTLAGGVTNGLDFDSEELEKELDILLQDTTKEPLDLPDNPRNRHFTNSVPNPRISDAE XP_006 RRNWTSSFRIPPKNLWICLTTPAIGILPTACLTLGSQMLNLKLNLRNCPYQREVWSQAVN 370 380 390 400 410 420 >>XP_016869453 (OMIM: 611130) PREDICTED: charged multive (343 aa) initn: 2189 init1: 2189 opt: 2189 Z-score: 2178.0 bits: 411.8 E(85289): 1.4e-114 Smith-Waterman score: 2189; 100.0% identity (100.0% similar) in 343 aa overlap (111-453:1-343) 90 100 110 120 130 140 pF1KE6 FQRKGSVPLGLATVLQDLLRRGELQRESDFMASVDSSWISWGVGVFLLKPLKWTLSNMLG :::::::::::::::::::::::::::::: XP_016 MASVDSSWISWGVGVFLLKPLKWTLSNMLG 10 20 30 150 160 170 180 190 200 pF1KE6 DNKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVALSELSTLCANSCPDERTFYLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DNKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVALSELSTLCANSCPDERTFYLV 40 50 60 70 80 90 210 220 230 240 250 260 pF1KE6 LLQLQKEKRVTVLEQNGEKIVKFARGPRAKVSPVNDVDVGVYQLMQSEQLLSRKVESLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LLQLQKEKRVTVLEQNGEKIVKFARGPRAKVSPVNDVDVGVYQLMQSEQLLSRKVESLSQ 100 110 120 130 140 150 270 280 290 300 310 320 pF1KE6 EAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQM 160 170 180 190 200 210 330 340 350 360 370 380 pF1KE6 VFNAYQAGVGALKLSMKDVTVEKAESLVDQIQELCDTQDEVSQTLAGGVTNGLDFDSEEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VFNAYQAGVGALKLSMKDVTVEKAESLVDQIQELCDTQDEVSQTLAGGVTNGLDFDSEEL 220 230 240 250 260 270 390 400 410 420 430 440 pF1KE6 EKELDILLQDTTKEPLDLPDNPRNRHFTNSVPNPRISDAELEAELEKLSLSEGGLVPSSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EKELDILLQDTTKEPLDLPDNPRNRHFTNSVPNPRISDAELEAELEKLSLSEGGLVPSSK 280 290 300 310 320 330 450 pF1KE6 SPKRQLEPTLKPL ::::::::::::: XP_016 SPKRQLEPTLKPL 340 >>NP_001304828 (OMIM: 611130) charged multivesicular bod (343 aa) initn: 2189 init1: 2189 opt: 2189 Z-score: 2178.0 bits: 411.8 E(85289): 1.4e-114 Smith-Waterman score: 2189; 100.0% identity (100.0% similar) in 343 aa overlap (111-453:1-343) 90 100 110 120 130 140 pF1KE6 FQRKGSVPLGLATVLQDLLRRGELQRESDFMASVDSSWISWGVGVFLLKPLKWTLSNMLG :::::::::::::::::::::::::::::: NP_001 MASVDSSWISWGVGVFLLKPLKWTLSNMLG 10 20 30 150 160 170 180 190 200 pF1KE6 DNKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVALSELSTLCANSCPDERTFYLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DNKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVALSELSTLCANSCPDERTFYLV 40 50 60 70 80 90 210 220 230 240 250 260 pF1KE6 LLQLQKEKRVTVLEQNGEKIVKFARGPRAKVSPVNDVDVGVYQLMQSEQLLSRKVESLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LLQLQKEKRVTVLEQNGEKIVKFARGPRAKVSPVNDVDVGVYQLMQSEQLLSRKVESLSQ 100 110 120 130 140 150 270 280 290 300 310 320 pF1KE6 EAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQM 160 170 180 190 200 210 330 340 350 360 370 380 pF1KE6 VFNAYQAGVGALKLSMKDVTVEKAESLVDQIQELCDTQDEVSQTLAGGVTNGLDFDSEEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VFNAYQAGVGALKLSMKDVTVEKAESLVDQIQELCDTQDEVSQTLAGGVTNGLDFDSEEL 220 230 240 250 260 270 390 400 410 420 430 440 pF1KE6 EKELDILLQDTTKEPLDLPDNPRNRHFTNSVPNPRISDAELEAELEKLSLSEGGLVPSSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EKELDILLQDTTKEPLDLPDNPRNRHFTNSVPNPRISDAELEAELEKLSLSEGGLVPSSK 280 290 300 310 320 330 450 pF1KE6 SPKRQLEPTLKPL ::::::::::::: NP_001 SPKRQLEPTLKPL 340 >>XP_016869451 (OMIM: 611130) PREDICTED: charged multive (385 aa) initn: 2071 init1: 2071 opt: 2071 Z-score: 2060.4 bits: 390.2 E(85289): 5e-108 Smith-Waterman score: 2071; 98.5% identity (99.1% similar) in 331 aa overlap (111-441:1-331) 90 100 110 120 130 140 pF1KE6 FQRKGSVPLGLATVLQDLLRRGELQRESDFMASVDSSWISWGVGVFLLKPLKWTLSNMLG :::::::::::::::::::::::::::::: XP_016 MASVDSSWISWGVGVFLLKPLKWTLSNMLG 10 20 30 150 160 170 180 190 200 pF1KE6 DNKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVALSELSTLCANSCPDERTFYLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DNKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVALSELSTLCANSCPDERTFYLV 40 50 60 70 80 90 210 220 230 240 250 260 pF1KE6 LLQLQKEKRVTVLEQNGEKIVKFARGPRAKVSPVNDVDVGVYQLMQSEQLLSRKVESLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LLQLQKEKRVTVLEQNGEKIVKFARGPRAKVSPVNDVDVGVYQLMQSEQLLSRKVESLSQ 100 110 120 130 140 150 270 280 290 300 310 320 pF1KE6 EAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQM 160 170 180 190 200 210 330 340 350 360 370 380 pF1KE6 VFNAYQAGVGALKLSMKDVTVEKAESLVDQIQELCDTQDEVSQTLAGGVTNGLDFDSEEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VFNAYQAGVGALKLSMKDVTVEKAESLVDQIQELCDTQDEVSQTLAGGVTNGLDFDSEEL 220 230 240 250 260 270 390 400 410 420 430 440 pF1KE6 EKELDILLQDTTKEPLDLPDNPRNRHFTNSVPNPRISDAELEAELEKLSLSEGGLVPSSK ::::::::::::::::::::::::::::::::::::::::::::::::::::::. :: XP_016 EKELDILLQDTTKEPLDLPDNPRNRHFTNSVPNPRISDAELEAELEKLSLSEGGMELFSK 280 290 300 310 320 330 450 pF1KE6 SPKRQLEPTLKPL . XP_016 AFGGHMAFWLTELMGPSPITPFARVPEPCRELRVVYIKTQSLNHWNAFIFKIFLL 340 350 360 370 380 >>XP_016869452 (OMIM: 611130) PREDICTED: charged multive (385 aa) initn: 2071 init1: 2071 opt: 2071 Z-score: 2060.4 bits: 390.2 E(85289): 5e-108 Smith-Waterman score: 2071; 98.5% identity (99.1% similar) in 331 aa overlap (111-441:1-331) 90 100 110 120 130 140 pF1KE6 FQRKGSVPLGLATVLQDLLRRGELQRESDFMASVDSSWISWGVGVFLLKPLKWTLSNMLG :::::::::::::::::::::::::::::: XP_016 MASVDSSWISWGVGVFLLKPLKWTLSNMLG 10 20 30 150 160 170 180 190 200 pF1KE6 DNKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVALSELSTLCANSCPDERTFYLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DNKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVALSELSTLCANSCPDERTFYLV 40 50 60 70 80 90 210 220 230 240 250 260 pF1KE6 LLQLQKEKRVTVLEQNGEKIVKFARGPRAKVSPVNDVDVGVYQLMQSEQLLSRKVESLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LLQLQKEKRVTVLEQNGEKIVKFARGPRAKVSPVNDVDVGVYQLMQSEQLLSRKVESLSQ 100 110 120 130 140 150 270 280 290 300 310 320 pF1KE6 EAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQM 160 170 180 190 200 210 330 340 350 360 370 380 pF1KE6 VFNAYQAGVGALKLSMKDVTVEKAESLVDQIQELCDTQDEVSQTLAGGVTNGLDFDSEEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VFNAYQAGVGALKLSMKDVTVEKAESLVDQIQELCDTQDEVSQTLAGGVTNGLDFDSEEL 220 230 240 250 260 270 390 400 410 420 430 440 pF1KE6 EKELDILLQDTTKEPLDLPDNPRNRHFTNSVPNPRISDAELEAELEKLSLSEGGLVPSSK ::::::::::::::::::::::::::::::::::::::::::::::::::::::. :: XP_016 EKELDILLQDTTKEPLDLPDNPRNRHFTNSVPNPRISDAELEAELEKLSLSEGGMELFSK 280 290 300 310 320 330 450 pF1KE6 SPKRQLEPTLKPL . XP_016 AFGGHMAFWLTELMGPSPITPFARVPEPCRELRVVYIKTQSLNHWNAFIFKIFLL 340 350 360 370 380 >>XP_016869454 (OMIM: 611130) PREDICTED: charged multive (319 aa) initn: 1542 init1: 1542 opt: 1542 Z-score: 1537.3 bits: 293.2 E(85289): 6.9e-79 Smith-Waterman score: 1542; 97.6% identity (99.2% similar) in 249 aa overlap (111-359:1-249) 90 100 110 120 130 140 pF1KE6 FQRKGSVPLGLATVLQDLLRRGELQRESDFMASVDSSWISWGVGVFLLKPLKWTLSNMLG :::::::::::::::::::::::::::::: XP_016 MASVDSSWISWGVGVFLLKPLKWTLSNMLG 10 20 30 150 160 170 180 190 200 pF1KE6 DNKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVALSELSTLCANSCPDERTFYLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DNKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVALSELSTLCANSCPDERTFYLV 40 50 60 70 80 90 210 220 230 240 250 260 pF1KE6 LLQLQKEKRVTVLEQNGEKIVKFARGPRAKVSPVNDVDVGVYQLMQSEQLLSRKVESLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LLQLQKEKRVTVLEQNGEKIVKFARGPRAKVSPVNDVDVGVYQLMQSEQLLSRKVESLSQ 100 110 120 130 140 150 270 280 290 300 310 320 pF1KE6 EAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQM 160 170 180 190 200 210 330 340 350 360 370 380 pF1KE6 VFNAYQAGVGALKLSMKDVTVEKAESLVDQIQELCDTQDEVSQTLAGGVTNGLDFDSEEL :::::::::::::::::::::::::::::::::. ... XP_016 VFNAYQAGVGALKLSMKDVTVEKAESLVDQIQEILTVKNWRRNWTSSFRIPPKNLWICLT 220 230 240 250 260 270 390 400 410 420 430 440 pF1KE6 EKELDILLQDTTKEPLDLPDNPRNRHFTNSVPNPRISDAELEAELEKLSLSEGGLVPSSK XP_016 TPAIGILPTACLTLGSQMLNLKLNLRNCPYQREVWSQAVNLQKGNWNRL 280 290 300 310 >>NP_078867 (OMIM: 610901) charged multivesicular body p (201 aa) initn: 144 init1: 95 opt: 246 Z-score: 255.9 bits: 55.4 E(85289): 1.6e-07 Smith-Waterman score: 246; 26.4% identity (62.9% similar) in 197 aa overlap (228-423:7-199) 200 210 220 230 240 250 pF1KE6 YLVLLQLQKEKRVTVLEQNGEKIVKFARGPRAKVSPVNDVDVGVYQLMQSEQLLSRKVES : : : :.. : .. :: :... : . . NP_078 MGNLFGRKKQSRVTEQDKAILQLKQQRDKLRQYQKR 10 20 30 260 270 280 290 300 310 pF1KE6 LSQEAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQT ..:. :: . ::. : :.:. : :: :. :. .. . .......... : .: NP_078 IAQQLERERALARQLLRDGRKERAKLLLKKKRYQEQLLDRTENQISSLEAMVQSIEFTQI 40 50 60 70 80 90 320 330 340 350 360 370 pF1KE6 DQMVFNAYQAGVGALKLSMKDVTVEKAESLVDQIQELCDTQDEVSQTLAGGVTNGLDFDS .. :... : : :. . ...:..: ..:. :: . : .... :::. :. : NP_078 EMKVMEGLQFGNECLNKMHQVMSIEEVERILDETQEAVEYQRQIDELLAGSFTQ---EDE 100 110 120 130 140 150 380 390 400 410 420 430 pF1KE6 EELEKELDILLQDTTKEPLDLPDNPRNRHFTNSVP-NPRISDAELEAELEKLSLSEGGLV . . .::. . :. . : ..:..: ... ..:: . : .::: : NP_078 DAILEELSAITQEQIELP-EVPSEPLPEKIPENVPVKARPRQAELVAAS 160 170 180 190 200 440 450 pF1KE6 PSSKSPKRQLEPTLKPL >>XP_005257725 (OMIM: 610901) PREDICTED: charged multive (245 aa) initn: 125 init1: 95 opt: 233 Z-score: 241.8 bits: 53.1 E(85289): 9.9e-07 Smith-Waterman score: 233; 25.9% identity (61.1% similar) in 216 aa overlap (228-441:7-213) 200 210 220 230 240 250 pF1KE6 YLVLLQLQKEKRVTVLEQNGEKIVKFARGPRAKVSPVNDVDVGVYQLMQSEQLLSRKVES : : : :.. : .. :: :... : . . XP_005 MGNLFGRKKQSRVTEQDKAILQLKQQRDKLRQYQKR 10 20 30 260 270 280 290 300 310 pF1KE6 LSQEAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQT ..:. :: . ::. : :.:. : :: :. :. .. . .......... : .: XP_005 IAQQLERERALARQLLRDGRKERAKLLLKKKRYQEQLLDRTENQISSLEAMVQSIEFTQI 40 50 60 70 80 90 320 330 340 350 360 370 pF1KE6 DQMVFNAYQAGVGALKLSMKDVTVEKAESLVDQIQELCDTQDEVSQTLAGGVTNGLDFDS .. :... : : :. . ...:..: ..:. :: . : .... :::. : . : XP_005 EMKVMEGLQFGNECLNKMHQVMSIEEVERILDETQEAVEYQRQIDELLAGSFT---QEDE 100 110 120 130 140 150 380 390 400 410 420 430 pF1KE6 EELEKELDILLQDTTKEPLDLPDNPRNRHFTNSVPNPRISDAE--LEAELEKLSLSEGGL . . .::. . :.: ..::. : .. . ...:. . :. :: :: : ::. XP_005 DAILEELSAI----TQEQIELPEVP-SEPLPEKIPGISMFDSFEWLEFAGEKWIL-EGNK 160 170 180 190 200 440 450 pF1KE6 VPSSKSPKRQLEPTLKPL . :.. XP_005 TECSQAFLGRGQALLPGCLAWGRACLALGLGLGFPGVR 210 220 230 240 453 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 13:38:30 2016 done: Tue Nov 8 13:38:31 2016 Total Scan time: 9.050 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]