Result of FASTA (ccds) for
pFN21AE1206
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1206, 126 aa
1>>>pF1KE1206 126 - 126 aa - 126 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1943+/-0.000723; mu= 12.6201+/- 0.044
mean_var=74.0817+/-14.459, 0's: 0 Z-trim(110.4): 26 B-trim: 276 in 1/53
Lambda= 0.149011
statistics sampled from 11569 (11595) to 11569 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.725), E-opt: 0.2 (0.356), width: 16
Scan time: 1.460
The best scores are: opt bits E(32554)
CCDS4618.1 HIST1H2BJ gene_id:8970|Hs108|chr6 ( 126) 787 177.4 2.1e-45
CCDS4621.1 HIST1H2BK gene_id:85236|Hs108|chr6 ( 126) 786 177.1 2.5e-45
CCDS936.1 HIST2H2BE gene_id:8349|Hs108|chr1 ( 126) 783 176.5 3.8e-45
CCDS4594.1 HIST1H2BG gene_id:8339|Hs108|chr6 ( 126) 782 176.3 4.5e-45
CCDS4584.1 HIST1H2BC gene_id:8347|Hs108|chr6 ( 126) 782 176.3 4.5e-45
CCDS4592.1 HIST1H2BF gene_id:8343|Hs108|chr6 ( 126) 782 176.3 4.5e-45
CCDS4603.1 HIST1H2BI gene_id:8346|Hs108|chr6 ( 126) 782 176.3 4.5e-45
CCDS4588.1 HIST1H2BE gene_id:8344|Hs108|chr6 ( 126) 782 176.3 4.5e-45
CCDS4640.1 HIST1H2BO gene_id:8348|Hs108|chr6 ( 126) 779 175.6 7e-45
CCDS4575.1 HIST1H2BB gene_id:3018|Hs108|chr6 ( 126) 778 175.4 8.1e-45
CCDS4601.1 HIST1H2BH gene_id:8345|Hs108|chr6 ( 126) 778 175.4 8.1e-45
CCDS4633.1 HIST1H2BN gene_id:8341|Hs108|chr6 ( 126) 778 175.4 8.1e-45
CCDS4587.1 HIST1H2BD gene_id:3017|Hs108|chr6 ( 126) 777 175.2 9.4e-45
CCDS30846.1 HIST2H2BF gene_id:440689|Hs108|chr1 ( 126) 773 174.3 1.7e-44
CCDS53359.1 HIST2H2BF gene_id:440689|Hs108|chr1 ( 134) 773 174.4 1.8e-44
CCDS4629.1 HIST1H2BM gene_id:8342|Hs108|chr6 ( 126) 766 172.8 4.8e-44
CCDS1574.1 HIST3H2BB gene_id:128312|Hs108|chr1 ( 126) 761 171.8 1e-43
CCDS4625.1 HIST1H2BL gene_id:8340|Hs108|chr6 ( 126) 760 171.5 1.2e-43
CCDS4563.1 HIST1H2BA gene_id:255626|Hs108|chr6 ( 127) 663 150.7 2.3e-37
CCDS55468.1 H2BFM gene_id:286436|Hs108|chrX ( 154) 327 78.5 1.5e-15
CCDS35362.1 H2BFWT gene_id:158983|Hs108|chrX ( 175) 301 73.0 7.7e-14
>>CCDS4618.1 HIST1H2BJ gene_id:8970|Hs108|chr6 (126 aa)
initn: 787 init1: 787 opt: 787 Z-score: 928.6 bits: 177.4 E(32554): 2.1e-45
Smith-Waterman score: 787; 100.0% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KE1 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KE1 KYTSAK
::::::
CCDS46 KYTSAK
>>CCDS4621.1 HIST1H2BK gene_id:85236|Hs108|chr6 (126 aa)
initn: 786 init1: 786 opt: 786 Z-score: 927.4 bits: 177.1 E(32554): 2.5e-45
Smith-Waterman score: 786; 99.2% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KE1 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
:::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
CCDS46 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KE1 KYTSAK
::::::
CCDS46 KYTSAK
>>CCDS936.1 HIST2H2BE gene_id:8349|Hs108|chr1 (126 aa)
initn: 871 init1: 783 opt: 783 Z-score: 923.9 bits: 176.5 E(32554): 3.8e-45
Smith-Waterman score: 783; 99.2% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KE1 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KE1 KYTSAK
::::.:
CCDS93 KYTSSK
>>CCDS4594.1 HIST1H2BG gene_id:8339|Hs108|chr6 (126 aa)
initn: 849 init1: 782 opt: 782 Z-score: 922.8 bits: 176.3 E(32554): 4.5e-45
Smith-Waterman score: 782; 98.4% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KE1 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
:::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
CCDS45 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KE1 KYTSAK
::::.:
CCDS45 KYTSSK
>>CCDS4584.1 HIST1H2BC gene_id:8347|Hs108|chr6 (126 aa)
initn: 849 init1: 782 opt: 782 Z-score: 922.8 bits: 176.3 E(32554): 4.5e-45
Smith-Waterman score: 782; 98.4% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KE1 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
:::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
CCDS45 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KE1 KYTSAK
::::.:
CCDS45 KYTSSK
>>CCDS4592.1 HIST1H2BF gene_id:8343|Hs108|chr6 (126 aa)
initn: 849 init1: 782 opt: 782 Z-score: 922.8 bits: 176.3 E(32554): 4.5e-45
Smith-Waterman score: 782; 98.4% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KE1 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
:::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
CCDS45 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KE1 KYTSAK
::::.:
CCDS45 KYTSSK
>>CCDS4603.1 HIST1H2BI gene_id:8346|Hs108|chr6 (126 aa)
initn: 849 init1: 782 opt: 782 Z-score: 922.8 bits: 176.3 E(32554): 4.5e-45
Smith-Waterman score: 782; 98.4% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KE1 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
:::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
CCDS46 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KE1 KYTSAK
::::.:
CCDS46 KYTSSK
>>CCDS4588.1 HIST1H2BE gene_id:8344|Hs108|chr6 (126 aa)
initn: 849 init1: 782 opt: 782 Z-score: 922.8 bits: 176.3 E(32554): 4.5e-45
Smith-Waterman score: 782; 98.4% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KE1 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
:::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
CCDS45 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KE1 KYTSAK
::::.:
CCDS45 KYTSSK
>>CCDS4640.1 HIST1H2BO gene_id:8348|Hs108|chr6 (126 aa)
initn: 867 init1: 779 opt: 779 Z-score: 919.3 bits: 175.6 E(32554): 7e-45
Smith-Waterman score: 779; 98.4% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KE1 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MPDPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KE1 KYTSAK
::::.:
CCDS46 KYTSSK
>>CCDS4575.1 HIST1H2BB gene_id:3018|Hs108|chr6 (126 aa)
initn: 866 init1: 778 opt: 778 Z-score: 918.1 bits: 175.4 E(32554): 8.1e-45
Smith-Waterman score: 778; 97.6% identity (100.0% similar) in 126 aa overlap (1-126:1-126)
10 20 30 40 50 60
pF1KE1 MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
::::.:::::::::::::.:::::::::::::::::::::::::::::::::::::::::
CCDS45 MPEPSKSAPAPKKGSKKAITKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
70 80 90 100 110 120
pF1KE1 KYTSAK
::::.:
CCDS45 KYTSSK
126 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 16:54:40 2016 done: Sun Nov 6 16:54:40 2016
Total Scan time: 1.460 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]