Result of FASTA (ccds) for pFN21AE1215
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1215, 136 aa
  1>>>pF1KE1215 136 - 136 aa - 136 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.7139+/-0.000753; mu= 15.4526+/- 0.046
 mean_var=67.4503+/-13.428, 0's: 0 Z-trim(109.1): 23  B-trim: 281 in 2/47
 Lambda= 0.156164
 statistics sampled from 10666 (10687) to 10666 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.714), E-opt: 0.2 (0.328), width:  16
 Scan time:  1.630

The best scores are:                                      opt bits E(32554)
CCDS4570.1 HIST1H3A gene_id:8350|Hs108|chr6        ( 136)  870 203.9 2.5e-53
CCDS4636.1 HIST1H3I gene_id:8354|Hs108|chr6        ( 136)  870 203.9 2.5e-53
CCDS4600.1 HIST1H3F gene_id:8968|Hs108|chr6        ( 136)  870 203.9 2.5e-53
CCDS4638.1 HIST1H3J gene_id:8356|Hs108|chr6        ( 136)  870 203.9 2.5e-53
CCDS4602.1 HIST1H3G gene_id:8355|Hs108|chr6        ( 136)  870 203.9 2.5e-53
CCDS4596.1 HIST1H3E gene_id:8353|Hs108|chr6        ( 136)  870 203.9 2.5e-53
CCDS4576.1 HIST1H3C gene_id:8352|Hs108|chr6        ( 136)  870 203.9 2.5e-53
CCDS4590.1 HIST1H3D gene_id:8351|Hs108|chr6        ( 136)  870 203.9 2.5e-53
CCDS4627.1 HIST1H3H gene_id:8357|Hs108|chr6        ( 136)  870 203.9 2.5e-53
CCDS4573.1 HIST1H3B gene_id:8358|Hs108|chr6        ( 136)  870 203.9 2.5e-53
CCDS30848.1 HIST2H3C gene_id:126961|Hs108|chr1     ( 136)  856 200.8 2.2e-52
CCDS41388.1 HIST2H3D gene_id:653604|Hs108|chr1     ( 136)  856 200.8 2.2e-52
CCDS30850.1 HIST2H3A gene_id:333932|Hs108|chr1     ( 136)  856 200.8 2.2e-52
CCDS1572.1 HIST3H3 gene_id:8290|Hs108|chr1         ( 136)  852 199.9 4.1e-52
CCDS1550.1 H3F3A gene_id:3020|Hs108|chr1           ( 136)  837 196.5 4.3e-51
CCDS11729.1 H3F3B gene_id:3021|Hs108|chr17         ( 136)  837 196.5 4.3e-51
CCDS31769.1 H3F3C gene_id:440093|Hs108|chr12       ( 135)  791 186.1 5.6e-48
CCDS1729.1 CENPA gene_id:1058|Hs108|chr2           ( 140)  374 92.2 1.1e-19


>>CCDS4570.1 HIST1H3A gene_id:8350|Hs108|chr6             (136 aa)
 initn: 870 init1: 870 opt: 870  Z-score: 1071.0  bits: 203.9 E(32554): 2.5e-53
Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KE1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
               70        80        90       100       110       120

              130      
pF1KE1 MPKDIQLARRIRGERA
       ::::::::::::::::
CCDS45 MPKDIQLARRIRGERA
              130      

>>CCDS4636.1 HIST1H3I gene_id:8354|Hs108|chr6             (136 aa)
 initn: 870 init1: 870 opt: 870  Z-score: 1071.0  bits: 203.9 E(32554): 2.5e-53
Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KE1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
               70        80        90       100       110       120

              130      
pF1KE1 MPKDIQLARRIRGERA
       ::::::::::::::::
CCDS46 MPKDIQLARRIRGERA
              130      

>>CCDS4600.1 HIST1H3F gene_id:8968|Hs108|chr6             (136 aa)
 initn: 870 init1: 870 opt: 870  Z-score: 1071.0  bits: 203.9 E(32554): 2.5e-53
Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KE1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
               70        80        90       100       110       120

              130      
pF1KE1 MPKDIQLARRIRGERA
       ::::::::::::::::
CCDS46 MPKDIQLARRIRGERA
              130      

>>CCDS4638.1 HIST1H3J gene_id:8356|Hs108|chr6             (136 aa)
 initn: 870 init1: 870 opt: 870  Z-score: 1071.0  bits: 203.9 E(32554): 2.5e-53
Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KE1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
               70        80        90       100       110       120

              130      
pF1KE1 MPKDIQLARRIRGERA
       ::::::::::::::::
CCDS46 MPKDIQLARRIRGERA
              130      

>>CCDS4602.1 HIST1H3G gene_id:8355|Hs108|chr6             (136 aa)
 initn: 870 init1: 870 opt: 870  Z-score: 1071.0  bits: 203.9 E(32554): 2.5e-53
Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KE1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
               70        80        90       100       110       120

              130      
pF1KE1 MPKDIQLARRIRGERA
       ::::::::::::::::
CCDS46 MPKDIQLARRIRGERA
              130      

>>CCDS4596.1 HIST1H3E gene_id:8353|Hs108|chr6             (136 aa)
 initn: 870 init1: 870 opt: 870  Z-score: 1071.0  bits: 203.9 E(32554): 2.5e-53
Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KE1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
               70        80        90       100       110       120

              130      
pF1KE1 MPKDIQLARRIRGERA
       ::::::::::::::::
CCDS45 MPKDIQLARRIRGERA
              130      

>>CCDS4576.1 HIST1H3C gene_id:8352|Hs108|chr6             (136 aa)
 initn: 870 init1: 870 opt: 870  Z-score: 1071.0  bits: 203.9 E(32554): 2.5e-53
Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KE1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
               70        80        90       100       110       120

              130      
pF1KE1 MPKDIQLARRIRGERA
       ::::::::::::::::
CCDS45 MPKDIQLARRIRGERA
              130      

>>CCDS4590.1 HIST1H3D gene_id:8351|Hs108|chr6             (136 aa)
 initn: 870 init1: 870 opt: 870  Z-score: 1071.0  bits: 203.9 E(32554): 2.5e-53
Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KE1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
               70        80        90       100       110       120

              130      
pF1KE1 MPKDIQLARRIRGERA
       ::::::::::::::::
CCDS45 MPKDIQLARRIRGERA
              130      

>>CCDS4627.1 HIST1H3H gene_id:8357|Hs108|chr6             (136 aa)
 initn: 870 init1: 870 opt: 870  Z-score: 1071.0  bits: 203.9 E(32554): 2.5e-53
Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KE1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
               70        80        90       100       110       120

              130      
pF1KE1 MPKDIQLARRIRGERA
       ::::::::::::::::
CCDS46 MPKDIQLARRIRGERA
              130      

>>CCDS4573.1 HIST1H3B gene_id:8358|Hs108|chr6             (136 aa)
 initn: 870 init1: 870 opt: 870  Z-score: 1071.0  bits: 203.9 E(32554): 2.5e-53
Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KE1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
               70        80        90       100       110       120

              130      
pF1KE1 MPKDIQLARRIRGERA
       ::::::::::::::::
CCDS45 MPKDIQLARRIRGERA
              130      




136 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 16:55:14 2016 done: Sun Nov  6 16:55:14 2016
 Total Scan time:  1.630 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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