Result of FASTA (ccds) for pFN21AE6155
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE6155, 130 aa
  1>>>pF1KE6155 130 - 130 aa - 130 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.7025+/-0.000738; mu= 13.8783+/- 0.045
 mean_var=55.2697+/-11.226, 0's: 0 Z-trim(108.6): 39  B-trim: 372 in 2/48
 Lambda= 0.172517
 statistics sampled from 10298 (10340) to 10298 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.706), E-opt: 0.2 (0.318), width:  16
 Scan time:  1.640

The best scores are:                                      opt bits E(32554)
CCDS4574.1 HIST1H2AB gene_id:8335|Hs108|chr6       ( 130)  825 212.7 5.1e-56
CCDS4595.1 HIST1H2AE gene_id:3012|Hs108|chr6       ( 130)  825 212.7 5.1e-56
CCDS1573.1 HIST3H2A gene_id:92815|Hs108|chr1       ( 130)  822 212.0 8.5e-56
CCDS4591.1 HIST1H2AD gene_id:3013|Hs108|chr6       ( 130)  821 211.7   1e-55
CCDS4585.1 HIST1H2AC gene_id:8334|Hs108|chr6       ( 130)  818 211.0 1.7e-55
CCDS4639.1 HIST1H2AM gene_id:8336|Hs108|chr6       ( 130)  817 210.7   2e-55
CCDS4632.1 HIST1H2AK gene_id:8330|Hs108|chr6       ( 130)  817 210.7   2e-55
CCDS4626.1 HIST1H2AI gene_id:8329|Hs108|chr6       ( 130)  817 210.7   2e-55
CCDS4619.1 HIST1H2AG gene_id:8969|Hs108|chr6       ( 130)  817 210.7   2e-55
CCDS4634.1 HIST1H2AL gene_id:8332|Hs108|chr6       ( 130)  817 210.7   2e-55
CCDS934.1 HIST2H2AA3 gene_id:8337|Hs108|chr1       ( 130)  812 209.5 4.8e-55
CCDS30849.1 HIST2H2AA4 gene_id:723790|Hs108|chr1   ( 130)  812 209.5 4.8e-55
CCDS4622.1 HIST1H2AH gene_id:85235|Hs108|chr6      ( 128)  803 207.2 2.2e-54
CCDS4628.1 HIST1H2AJ gene_id:8331|Hs108|chr6       ( 128)  798 206.0 5.3e-54
CCDS937.1 HIST2H2AC gene_id:8338|Hs108|chr1        ( 129)  782 202.0 8.4e-53
CCDS938.1 HIST2H2AB gene_id:317772|Hs108|chr1      ( 130)  777 200.8   2e-52
CCDS4562.1 HIST1H2AA gene_id:221613|Hs108|chr6     ( 131)  774 200.0 3.4e-52
CCDS31752.1 H2AFJ gene_id:55766|Hs108|chr12        ( 129)  765 197.8 1.6e-51
CCDS8410.1 H2AFX gene_id:3014|Hs108|chr11          ( 143)  732 189.6 5.1e-49
CCDS4184.1 H2AFY gene_id:9555|Hs108|chr5           ( 369)  493 130.4 8.9e-31
CCDS4183.1 H2AFY gene_id:9555|Hs108|chr5           ( 371)  493 130.4 8.9e-31
CCDS4185.1 H2AFY gene_id:9555|Hs108|chr5           ( 372)  493 130.4   9e-31
CCDS7296.1 H2AFY2 gene_id:55506|Hs108|chr10        ( 372)  483 127.9   5e-30
CCDS5496.1 H2AFV gene_id:94239|Hs108|chr7          ( 128)  456 120.9 2.2e-28
CCDS3654.1 H2AFZ gene_id:3015|Hs108|chr4           ( 128)  452 119.9 4.4e-28
CCDS5495.1 H2AFV gene_id:94239|Hs108|chr7          ( 114)  410 109.4 5.7e-25
CCDS5497.1 H2AFV gene_id:94239|Hs108|chr7          ( 102)  361 97.2 2.4e-21
CCDS35461.1 H2AFB2 gene_id:474381|Hs108|chrX       ( 115)  295 80.8 2.4e-16
CCDS35464.1 H2AFB3 gene_id:83740|Hs108|chrX        ( 115)  295 80.8 2.4e-16
CCDS35458.1 H2AFB1 gene_id:474382|Hs108|chrX       ( 115)  286 78.5 1.1e-15
CCDS47581.1 H2AFV gene_id:94239|Hs108|chr7         (  66)  241 67.2 1.7e-12
CCDS5498.1 H2AFV gene_id:94239|Hs108|chr7          (  90)  221 62.3 6.8e-11


>>CCDS4574.1 HIST1H2AB gene_id:8335|Hs108|chr6            (130 aa)
 initn: 825 init1: 825 opt: 825  Z-score: 1119.2  bits: 212.7 E(32554): 5.1e-56
Smith-Waterman score: 825; 100.0% identity (100.0% similar) in 130 aa overlap (1-130:1-130)

               10        20        30        40        50        60
pF1KE6 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
               70        80        90       100       110       120

              130
pF1KE6 TESHHKAKGK
       ::::::::::
CCDS45 TESHHKAKGK
              130

>>CCDS4595.1 HIST1H2AE gene_id:3012|Hs108|chr6            (130 aa)
 initn: 825 init1: 825 opt: 825  Z-score: 1119.2  bits: 212.7 E(32554): 5.1e-56
Smith-Waterman score: 825; 100.0% identity (100.0% similar) in 130 aa overlap (1-130:1-130)

               10        20        30        40        50        60
pF1KE6 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
               70        80        90       100       110       120

              130
pF1KE6 TESHHKAKGK
       ::::::::::
CCDS45 TESHHKAKGK
              130

>>CCDS1573.1 HIST3H2A gene_id:92815|Hs108|chr1            (130 aa)
 initn: 822 init1: 822 opt: 822  Z-score: 1115.2  bits: 212.0 E(32554): 8.5e-56
Smith-Waterman score: 822; 99.2% identity (100.0% similar) in 130 aa overlap (1-130:1-130)

               10        20        30        40        50        60
pF1KE6 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
       ::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::
CCDS15 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
               70        80        90       100       110       120

              130
pF1KE6 TESHHKAKGK
       ::::::::::
CCDS15 TESHHKAKGK
              130

>>CCDS4591.1 HIST1H2AD gene_id:3013|Hs108|chr6            (130 aa)
 initn: 821 init1: 821 opt: 821  Z-score: 1113.8  bits: 211.7 E(32554): 1e-55
Smith-Waterman score: 821; 99.2% identity (100.0% similar) in 130 aa overlap (1-130:1-130)

               10        20        30        40        50        60
pF1KE6 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
       :::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
CCDS45 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
               70        80        90       100       110       120

              130
pF1KE6 TESHHKAKGK
       ::::::::::
CCDS45 TESHHKAKGK
              130

>>CCDS4585.1 HIST1H2AC gene_id:8334|Hs108|chr6            (130 aa)
 initn: 818 init1: 818 opt: 818  Z-score: 1109.8  bits: 211.0 E(32554): 1.7e-55
Smith-Waterman score: 818; 98.5% identity (100.0% similar) in 130 aa overlap (1-130:1-130)

               10        20        30        40        50        60
pF1KE6 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
       ::::::::::::::::.:::::::::::::::::::::::.:::::::::::::::::::
CCDS45 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
               70        80        90       100       110       120

              130
pF1KE6 TESHHKAKGK
       ::::::::::
CCDS45 TESHHKAKGK
              130

>>CCDS4639.1 HIST1H2AM gene_id:8336|Hs108|chr6            (130 aa)
 initn: 817 init1: 817 opt: 817  Z-score: 1108.4  bits: 210.7 E(32554): 2e-55
Smith-Waterman score: 817; 98.5% identity (100.0% similar) in 130 aa overlap (1-130:1-130)

               10        20        30        40        50        60
pF1KE6 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
       ::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
       :::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
               70        80        90       100       110       120

              130
pF1KE6 TESHHKAKGK
       ::::::::::
CCDS46 TESHHKAKGK
              130

>>CCDS4632.1 HIST1H2AK gene_id:8330|Hs108|chr6            (130 aa)
 initn: 817 init1: 817 opt: 817  Z-score: 1108.4  bits: 210.7 E(32554): 2e-55
Smith-Waterman score: 817; 98.5% identity (100.0% similar) in 130 aa overlap (1-130:1-130)

               10        20        30        40        50        60
pF1KE6 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
       ::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
       :::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
               70        80        90       100       110       120

              130
pF1KE6 TESHHKAKGK
       ::::::::::
CCDS46 TESHHKAKGK
              130

>>CCDS4626.1 HIST1H2AI gene_id:8329|Hs108|chr6            (130 aa)
 initn: 817 init1: 817 opt: 817  Z-score: 1108.4  bits: 210.7 E(32554): 2e-55
Smith-Waterman score: 817; 98.5% identity (100.0% similar) in 130 aa overlap (1-130:1-130)

               10        20        30        40        50        60
pF1KE6 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
       ::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
       :::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
               70        80        90       100       110       120

              130
pF1KE6 TESHHKAKGK
       ::::::::::
CCDS46 TESHHKAKGK
              130

>>CCDS4619.1 HIST1H2AG gene_id:8969|Hs108|chr6            (130 aa)
 initn: 817 init1: 817 opt: 817  Z-score: 1108.4  bits: 210.7 E(32554): 2e-55
Smith-Waterman score: 817; 98.5% identity (100.0% similar) in 130 aa overlap (1-130:1-130)

               10        20        30        40        50        60
pF1KE6 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
       ::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
       :::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
               70        80        90       100       110       120

              130
pF1KE6 TESHHKAKGK
       ::::::::::
CCDS46 TESHHKAKGK
              130

>>CCDS4634.1 HIST1H2AL gene_id:8332|Hs108|chr6            (130 aa)
 initn: 817 init1: 817 opt: 817  Z-score: 1108.4  bits: 210.7 E(32554): 2e-55
Smith-Waterman score: 817; 98.5% identity (100.0% similar) in 130 aa overlap (1-130:1-130)

               10        20        30        40        50        60
pF1KE6 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
       ::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
       :::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
               70        80        90       100       110       120

              130
pF1KE6 TESHHKAKGK
       ::::::::::
CCDS46 TESHHKAKGK
              130




130 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 09:55:51 2016 done: Tue Nov  8 09:55:51 2016
 Total Scan time:  1.640 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
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