FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3757, 395 aa 1>>>pF1KE3757 395 - 395 aa - 395 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2290+/-0.000373; mu= 19.1367+/- 0.023 mean_var=123.6832+/-25.994, 0's: 0 Z-trim(115.6): 127 B-trim: 0 in 0/56 Lambda= 0.115324 statistics sampled from 25929 (26085) to 25929 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.678), E-opt: 0.2 (0.306), width: 16 Scan time: 9.030 The best scores are: opt bits E(85289) NP_940988 (OMIM: 254780,608072) E3 ubiquitin-prote ( 395) 2698 460.3 3.6e-129 NP_036342 (OMIM: 254110,602290,615988) E3 ubiquiti ( 653) 257 54.5 8.9e-07 NP_001093149 (OMIM: 254110,602290,615988) E3 ubiqu ( 653) 257 54.5 8.9e-07 XP_005251870 (OMIM: 254110,602290,615988) PREDICTE ( 653) 257 54.5 8.9e-07 XP_016869975 (OMIM: 254110,602290,615988) PREDICTE ( 653) 257 54.5 8.9e-07 XP_011516700 (OMIM: 254110,602290,615988) PREDICTE ( 653) 257 54.5 8.9e-07 XP_016863442 (OMIM: 614141,615490) PREDICTED: trip ( 623) 226 49.3 3.1e-05 XP_006714228 (OMIM: 614141,615490) PREDICTED: trip ( 623) 226 49.3 3.1e-05 XP_011530100 (OMIM: 614141,615490) PREDICTED: trip ( 748) 226 49.4 3.5e-05 XP_006714225 (OMIM: 614141,615490) PREDICTED: trip ( 748) 226 49.4 3.5e-05 XP_011530097 (OMIM: 614141,615490) PREDICTED: trip ( 748) 226 49.4 3.5e-05 XP_006714224 (OMIM: 614141,615490) PREDICTED: trip ( 748) 226 49.4 3.5e-05 XP_006714223 (OMIM: 614141,615490) PREDICTED: trip ( 748) 226 49.4 3.5e-05 XP_011530098 (OMIM: 614141,615490) PREDICTED: trip ( 748) 226 49.4 3.5e-05 XP_011530096 (OMIM: 614141,615490) PREDICTED: trip ( 765) 226 49.4 3.5e-05 XP_006714222 (OMIM: 614141,615490) PREDICTED: trip ( 766) 226 49.4 3.5e-05 XP_006714221 (OMIM: 614141,615490) PREDICTED: trip ( 774) 226 49.4 3.5e-05 XP_006714220 (OMIM: 614141,615490) PREDICTED: trip ( 775) 226 49.4 3.5e-05 XP_016863443 (OMIM: 614141,615490) PREDICTED: trip ( 619) 196 44.3 0.00098 XP_016863444 (OMIM: 614141,615490) PREDICTED: trip ( 619) 196 44.3 0.00098 XP_016863434 (OMIM: 614141,615490) PREDICTED: trip ( 744) 196 44.4 0.0011 XP_016863438 (OMIM: 614141,615490) PREDICTED: trip ( 744) 196 44.4 0.0011 XP_016863440 (OMIM: 614141,615490) PREDICTED: trip ( 744) 196 44.4 0.0011 XP_016863441 (OMIM: 614141,615490) PREDICTED: trip ( 744) 196 44.4 0.0011 XP_016863439 (OMIM: 614141,615490) PREDICTED: trip ( 744) 196 44.4 0.0011 XP_016863433 (OMIM: 614141,615490) PREDICTED: trip ( 744) 196 44.4 0.0011 NP_001123539 (OMIM: 614141,615490) tripartite moti ( 744) 196 44.4 0.0011 XP_016863437 (OMIM: 614141,615490) PREDICTED: trip ( 744) 196 44.4 0.0011 XP_016863436 (OMIM: 614141,615490) PREDICTED: trip ( 761) 196 44.4 0.0011 XP_016863435 (OMIM: 614141,615490) PREDICTED: trip ( 762) 196 44.4 0.0011 XP_016863432 (OMIM: 614141,615490) PREDICTED: trip ( 770) 196 44.4 0.0011 NP_056086 (OMIM: 614141,615490) tripartite motif-c ( 771) 196 44.4 0.0011 >>NP_940988 (OMIM: 254780,608072) E3 ubiquitin-protein l (395 aa) initn: 2698 init1: 2698 opt: 2698 Z-score: 2439.9 bits: 460.3 E(85289): 3.6e-129 Smith-Waterman score: 2698; 100.0% identity (100.0% similar) in 395 aa overlap (1-395:1-395) 10 20 30 40 50 60 pF1KE3 MAAEASESGPALHELMREAEISLLECKVCFEKFGHRQQRRPRNLSCGHVVCLACVAALAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_940 MAAEASESGPALHELMREAEISLLECKVCFEKFGHRQQRRPRNLSCGHVVCLACVAALAH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 PRTLALECPFCRRACRGCDTSDCLPVLHLIELLGSALRQSPAAHRAAPSAPGALTCHHTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_940 PRTLALECPFCRRACRGCDTSDCLPVLHLIELLGSALRQSPAAHRAAPSAPGALTCHHTF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 GGWGTLVNPTGLALCPKTGRVVVVHDGRRRVKIFDSGGGCAHQFGEKGDAAQDIRYPVDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_940 GGWGTLVNPTGLALCPKTGRVVVVHDGRRRVKIFDSGGGCAHQFGEKGDAAQDIRYPVDV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 TITNDCHVVVTDAGDRSIKVFDFFGQIKLVIGGQFSLPWGVETTPQNGIVVTDAEAGSLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_940 TITNDCHVVVTDAGDRSIKVFDFFGQIKLVIGGQFSLPWGVETTPQNGIVVTDAEAGSLH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 LLDVDFAEGVLRRTERLQAHLCNPRGVAVSWLTGAIAVLEHPLALGTGVCSTRVKVFSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_940 LLDVDFAEGVLRRTERLQAHLCNPRGVAVSWLTGAIAVLEHPLALGTGVCSTRVKVFSSS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 MQLVGQVDTFGLSLYFPSKITASAVTFDHQGNVIVADTSGPAILCLGKPEEFPVPKPMVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_940 MQLVGQVDTFGLSLYFPSKITASAVTFDHQGNVIVADTSGPAILCLGKPEEFPVPKPMVT 310 320 330 340 350 360 370 380 390 pF1KE3 HGLSHPVALTFTKENSLLVLDTASHSIKVYKVDWG ::::::::::::::::::::::::::::::::::: NP_940 HGLSHPVALTFTKENSLLVLDTASHSIKVYKVDWG 370 380 390 >>NP_036342 (OMIM: 254110,602290,615988) E3 ubiquitin-pr (653 aa) initn: 369 init1: 151 opt: 257 Z-score: 242.6 bits: 54.5 E(85289): 8.9e-07 Smith-Waterman score: 321; 27.2% identity (55.1% similar) in 412 aa overlap (16-390:246-643) 10 20 30 40 pF1KE3 MAAEASESGPALHELMREAEISLLECKVCFEKFGHRQQRRPRNLS ...:...::: .. :. . ::.:. NP_036 SNSQVVEEQSYLLNIAEVQAVSRCDYFLAKIKQADVALLE-ETADEEEPELTASLPRELT 220 230 240 250 260 270 50 60 70 80 90 pF1KE3 --------CGHVVCLACVAALAHPRTLALECPFCRRAC-RGCDTSDCLPVLHLI--ELLG ::: : :. .:::. .: . .: . .:: . . . :... NP_036 LQDVELLKVGHVGPLQIGQAVKKPRTVNVEDSWAMEATASAASTSVTFREMDMSPEEVVA 280 290 300 310 320 330 100 110 120 130 140 pF1KE3 SALRQSPAAHRAAPSAPGALTCH--HTFGGWGT---LVN-PTGLALCPKTGRVVVVHDGR : : ::: .:. .: . : . .:. :. . : :..: . . :.:.:. : NP_036 SP-RASPAKQRGPEAASNIQQCLFLKKMGAKGSTPGMFNLPVSLYVTSQ-GEVLVADRGN 340 350 360 370 380 390 150 160 170 180 190 pF1KE3 RRVKIFDSGGGCAH-QFGEKG-DA------AQDIRYPVDVTITNDCH--VVVTDAGDRSI :...: : . . . .: :. . :. . .... .:. . :::. : :. NP_036 YRIQVFTRKGFLKEIRRSPSGIDSFVLSFLGADLPNLTPLSVAMNCQGLIGVTDSYDNSL 400 410 420 430 440 450 200 210 220 230 240 250 pF1KE3 KVFDFFGQIKLVIGGQFSLPWGVETTPQNGIVVTDAEAGSLHLLDVDFAEGVLRRTE--- ::. . :. .:.: :::. . :.. .::::.:.:.: . :: . ::.. . NP_036 KVYTLDGHCVACHRSQLSKPWGITALPSGQFVVTDVEGGKLWCFTVDRGSGVVKYSCLCS 460 470 480 490 500 510 260 270 280 290 300 pF1KE3 --RLQAHLCNPRGVAVSWLTGAIAVLE-----HPLALGTGVCSTRVKVFSSSMQLVGQVD : . :. .:. : . : :: : : : .. :. . . :: :.. NP_036 AVRPKFVTCDAEGT-VYFTQGLGLNLENRQNEHHLEGGFSIGSV-----GPDGQLGRQIS 520 530 540 550 560 310 320 330 340 350 360 pF1KE3 TFGLSLYFPSKITASAVTFDHQGNVIVADTSGPAILCLGKPEEFPVPKPMVTHGLSHPVA : .: . :. . : .:..::::.: :: . : . : .. .::. ::. NP_036 HF-FSENEDFRCIAG-MCVDARGDLIVADSSRKEILHFPKGGGYSV---LIREGLTCPVG 570 580 590 600 610 620 370 380 390 pF1KE3 LTFTKENSLLVLDTASHSIKVYKVDWG ...: ...::::: .: ::.: NP_036 IALTPKGQLLVLDCWDHCIKIYSYHLRRYSTP 630 640 650 >>NP_001093149 (OMIM: 254110,602290,615988) E3 ubiquitin (653 aa) initn: 369 init1: 151 opt: 257 Z-score: 242.6 bits: 54.5 E(85289): 8.9e-07 Smith-Waterman score: 321; 27.2% identity (55.1% similar) in 412 aa overlap (16-390:246-643) 10 20 30 40 pF1KE3 MAAEASESGPALHELMREAEISLLECKVCFEKFGHRQQRRPRNLS ...:...::: .. :. . ::.:. NP_001 SNSQVVEEQSYLLNIAEVQAVSRCDYFLAKIKQADVALLE-ETADEEEPELTASLPRELT 220 230 240 250 260 270 50 60 70 80 90 pF1KE3 --------CGHVVCLACVAALAHPRTLALECPFCRRAC-RGCDTSDCLPVLHLI--ELLG ::: : :. .:::. .: . .: . .:: . . . :... NP_001 LQDVELLKVGHVGPLQIGQAVKKPRTVNVEDSWAMEATASAASTSVTFREMDMSPEEVVA 280 290 300 310 320 330 100 110 120 130 140 pF1KE3 SALRQSPAAHRAAPSAPGALTCH--HTFGGWGT---LVN-PTGLALCPKTGRVVVVHDGR : : ::: .:. .: . : . .:. :. . : :..: . . :.:.:. : NP_001 SP-RASPAKQRGPEAASNIQQCLFLKKMGAKGSTPGMFNLPVSLYVTSQ-GEVLVADRGN 340 350 360 370 380 390 150 160 170 180 190 pF1KE3 RRVKIFDSGGGCAH-QFGEKG-DA------AQDIRYPVDVTITNDCH--VVVTDAGDRSI :...: : . . . .: :. . :. . .... .:. . :::. : :. NP_001 YRIQVFTRKGFLKEIRRSPSGIDSFVLSFLGADLPNLTPLSVAMNCQGLIGVTDSYDNSL 400 410 420 430 440 450 200 210 220 230 240 250 pF1KE3 KVFDFFGQIKLVIGGQFSLPWGVETTPQNGIVVTDAEAGSLHLLDVDFAEGVLRRTE--- ::. . :. .:.: :::. . :.. .::::.:.:.: . :: . ::.. . NP_001 KVYTLDGHCVACHRSQLSKPWGITALPSGQFVVTDVEGGKLWCFTVDRGSGVVKYSCLCS 460 470 480 490 500 510 260 270 280 290 300 pF1KE3 --RLQAHLCNPRGVAVSWLTGAIAVLE-----HPLALGTGVCSTRVKVFSSSMQLVGQVD : . :. .:. : . : :: : : : .. :. . . :: :.. NP_001 AVRPKFVTCDAEGT-VYFTQGLGLNLENRQNEHHLEGGFSIGSV-----GPDGQLGRQIS 520 530 540 550 560 310 320 330 340 350 360 pF1KE3 TFGLSLYFPSKITASAVTFDHQGNVIVADTSGPAILCLGKPEEFPVPKPMVTHGLSHPVA : .: . :. . : .:..::::.: :: . : . : .. .::. ::. NP_001 HF-FSENEDFRCIAG-MCVDARGDLIVADSSRKEILHFPKGGGYSV---LIREGLTCPVG 570 580 590 600 610 620 370 380 390 pF1KE3 LTFTKENSLLVLDTASHSIKVYKVDWG ...: ...::::: .: ::.: NP_001 IALTPKGQLLVLDCWDHCIKIYSYHLRRYSTP 630 640 650 >>XP_005251870 (OMIM: 254110,602290,615988) PREDICTED: E (653 aa) initn: 369 init1: 151 opt: 257 Z-score: 242.6 bits: 54.5 E(85289): 8.9e-07 Smith-Waterman score: 321; 27.2% identity (55.1% similar) in 412 aa overlap (16-390:246-643) 10 20 30 40 pF1KE3 MAAEASESGPALHELMREAEISLLECKVCFEKFGHRQQRRPRNLS ...:...::: .. :. . ::.:. XP_005 SNSQVVEEQSYLLNIAEVQAVSRCDYFLAKIKQADVALLE-ETADEEEPELTASLPRELT 220 230 240 250 260 270 50 60 70 80 90 pF1KE3 --------CGHVVCLACVAALAHPRTLALECPFCRRAC-RGCDTSDCLPVLHLI--ELLG ::: : :. .:::. .: . .: . .:: . . . :... XP_005 LQDVELLKVGHVGPLQIGQAVKKPRTVNVEDSWAMEATASAASTSVTFREMDMSPEEVVA 280 290 300 310 320 330 100 110 120 130 140 pF1KE3 SALRQSPAAHRAAPSAPGALTCH--HTFGGWGT---LVN-PTGLALCPKTGRVVVVHDGR : : ::: .:. .: . : . .:. :. . : :..: . . :.:.:. : XP_005 SP-RASPAKQRGPEAASNIQQCLFLKKMGAKGSTPGMFNLPVSLYVTSQ-GEVLVADRGN 340 350 360 370 380 390 150 160 170 180 190 pF1KE3 RRVKIFDSGGGCAH-QFGEKG-DA------AQDIRYPVDVTITNDCH--VVVTDAGDRSI :...: : . . . .: :. . :. . .... .:. . :::. : :. XP_005 YRIQVFTRKGFLKEIRRSPSGIDSFVLSFLGADLPNLTPLSVAMNCQGLIGVTDSYDNSL 400 410 420 430 440 450 200 210 220 230 240 250 pF1KE3 KVFDFFGQIKLVIGGQFSLPWGVETTPQNGIVVTDAEAGSLHLLDVDFAEGVLRRTE--- ::. . :. .:.: :::. . :.. .::::.:.:.: . :: . ::.. . XP_005 KVYTLDGHCVACHRSQLSKPWGITALPSGQFVVTDVEGGKLWCFTVDRGSGVVKYSCLCS 460 470 480 490 500 510 260 270 280 290 300 pF1KE3 --RLQAHLCNPRGVAVSWLTGAIAVLE-----HPLALGTGVCSTRVKVFSSSMQLVGQVD : . :. .:. : . : :: : : : .. :. . . :: :.. XP_005 AVRPKFVTCDAEGT-VYFTQGLGLNLENRQNEHHLEGGFSIGSV-----GPDGQLGRQIS 520 530 540 550 560 310 320 330 340 350 360 pF1KE3 TFGLSLYFPSKITASAVTFDHQGNVIVADTSGPAILCLGKPEEFPVPKPMVTHGLSHPVA : .: . :. . : .:..::::.: :: . : . : .. .::. ::. XP_005 HF-FSENEDFRCIAG-MCVDARGDLIVADSSRKEILHFPKGGGYSV---LIREGLTCPVG 570 580 590 600 610 620 370 380 390 pF1KE3 LTFTKENSLLVLDTASHSIKVYKVDWG ...: ...::::: .: ::.: XP_005 IALTPKGQLLVLDCWDHCIKIYSYHLRRYSTP 630 640 650 >>XP_016869975 (OMIM: 254110,602290,615988) PREDICTED: E (653 aa) initn: 369 init1: 151 opt: 257 Z-score: 242.6 bits: 54.5 E(85289): 8.9e-07 Smith-Waterman score: 321; 27.2% identity (55.1% similar) in 412 aa overlap (16-390:246-643) 10 20 30 40 pF1KE3 MAAEASESGPALHELMREAEISLLECKVCFEKFGHRQQRRPRNLS ...:...::: .. :. . ::.:. XP_016 SNSQVVEEQSYLLNIAEVQAVSRCDYFLAKIKQADVALLE-ETADEEEPELTASLPRELT 220 230 240 250 260 270 50 60 70 80 90 pF1KE3 --------CGHVVCLACVAALAHPRTLALECPFCRRAC-RGCDTSDCLPVLHLI--ELLG ::: : :. .:::. .: . .: . .:: . . . :... XP_016 LQDVELLKVGHVGPLQIGQAVKKPRTVNVEDSWAMEATASAASTSVTFREMDMSPEEVVA 280 290 300 310 320 330 100 110 120 130 140 pF1KE3 SALRQSPAAHRAAPSAPGALTCH--HTFGGWGT---LVN-PTGLALCPKTGRVVVVHDGR : : ::: .:. .: . : . .:. :. . : :..: . . :.:.:. : XP_016 SP-RASPAKQRGPEAASNIQQCLFLKKMGAKGSTPGMFNLPVSLYVTSQ-GEVLVADRGN 340 350 360 370 380 390 150 160 170 180 190 pF1KE3 RRVKIFDSGGGCAH-QFGEKG-DA------AQDIRYPVDVTITNDCH--VVVTDAGDRSI :...: : . . . .: :. . :. . .... .:. . :::. : :. XP_016 YRIQVFTRKGFLKEIRRSPSGIDSFVLSFLGADLPNLTPLSVAMNCQGLIGVTDSYDNSL 400 410 420 430 440 450 200 210 220 230 240 250 pF1KE3 KVFDFFGQIKLVIGGQFSLPWGVETTPQNGIVVTDAEAGSLHLLDVDFAEGVLRRTE--- ::. . :. .:.: :::. . :.. .::::.:.:.: . :: . ::.. . XP_016 KVYTLDGHCVACHRSQLSKPWGITALPSGQFVVTDVEGGKLWCFTVDRGSGVVKYSCLCS 460 470 480 490 500 510 260 270 280 290 300 pF1KE3 --RLQAHLCNPRGVAVSWLTGAIAVLE-----HPLALGTGVCSTRVKVFSSSMQLVGQVD : . :. .:. : . : :: : : : .. :. . . :: :.. XP_016 AVRPKFVTCDAEGT-VYFTQGLGLNLENRQNEHHLEGGFSIGSV-----GPDGQLGRQIS 520 530 540 550 560 310 320 330 340 350 360 pF1KE3 TFGLSLYFPSKITASAVTFDHQGNVIVADTSGPAILCLGKPEEFPVPKPMVTHGLSHPVA : .: . :. . : .:..::::.: :: . : . : .. .::. ::. XP_016 HF-FSENEDFRCIAG-MCVDARGDLIVADSSRKEILHFPKGGGYSV---LIREGLTCPVG 570 580 590 600 610 620 370 380 390 pF1KE3 LTFTKENSLLVLDTASHSIKVYKVDWG ...: ...::::: .: ::.: XP_016 IALTPKGQLLVLDCWDHCIKIYSYHLRRYSTP 630 640 650 >>XP_011516700 (OMIM: 254110,602290,615988) PREDICTED: E (653 aa) initn: 369 init1: 151 opt: 257 Z-score: 242.6 bits: 54.5 E(85289): 8.9e-07 Smith-Waterman score: 321; 27.2% identity (55.1% similar) in 412 aa overlap (16-390:246-643) 10 20 30 40 pF1KE3 MAAEASESGPALHELMREAEISLLECKVCFEKFGHRQQRRPRNLS ...:...::: .. :. . ::.:. XP_011 SNSQVVEEQSYLLNIAEVQAVSRCDYFLAKIKQADVALLE-ETADEEEPELTASLPRELT 220 230 240 250 260 270 50 60 70 80 90 pF1KE3 --------CGHVVCLACVAALAHPRTLALECPFCRRAC-RGCDTSDCLPVLHLI--ELLG ::: : :. .:::. .: . .: . .:: . . . :... XP_011 LQDVELLKVGHVGPLQIGQAVKKPRTVNVEDSWAMEATASAASTSVTFREMDMSPEEVVA 280 290 300 310 320 330 100 110 120 130 140 pF1KE3 SALRQSPAAHRAAPSAPGALTCH--HTFGGWGT---LVN-PTGLALCPKTGRVVVVHDGR : : ::: .:. .: . : . .:. :. . : :..: . . :.:.:. : XP_011 SP-RASPAKQRGPEAASNIQQCLFLKKMGAKGSTPGMFNLPVSLYVTSQ-GEVLVADRGN 340 350 360 370 380 390 150 160 170 180 190 pF1KE3 RRVKIFDSGGGCAH-QFGEKG-DA------AQDIRYPVDVTITNDCH--VVVTDAGDRSI :...: : . . . .: :. . :. . .... .:. . :::. : :. XP_011 YRIQVFTRKGFLKEIRRSPSGIDSFVLSFLGADLPNLTPLSVAMNCQGLIGVTDSYDNSL 400 410 420 430 440 450 200 210 220 230 240 250 pF1KE3 KVFDFFGQIKLVIGGQFSLPWGVETTPQNGIVVTDAEAGSLHLLDVDFAEGVLRRTE--- ::. . :. .:.: :::. . :.. .::::.:.:.: . :: . ::.. . XP_011 KVYTLDGHCVACHRSQLSKPWGITALPSGQFVVTDVEGGKLWCFTVDRGSGVVKYSCLCS 460 470 480 490 500 510 260 270 280 290 300 pF1KE3 --RLQAHLCNPRGVAVSWLTGAIAVLE-----HPLALGTGVCSTRVKVFSSSMQLVGQVD : . :. .:. : . : :: : : : .. :. . . :: :.. XP_011 AVRPKFVTCDAEGT-VYFTQGLGLNLENRQNEHHLEGGFSIGSV-----GPDGQLGRQIS 520 530 540 550 560 310 320 330 340 350 360 pF1KE3 TFGLSLYFPSKITASAVTFDHQGNVIVADTSGPAILCLGKPEEFPVPKPMVTHGLSHPVA : .: . :. . : .:..::::.: :: . : . : .. .::. ::. XP_011 HF-FSENEDFRCIAG-MCVDARGDLIVADSSRKEILHFPKGGGYSV---LIREGLTCPVG 570 580 590 600 610 620 370 380 390 pF1KE3 LTFTKENSLLVLDTASHSIKVYKVDWG ...: ...::::: .: ::.: XP_011 IALTPKGQLLVLDCWDHCIKIYSYHLRRYSTP 630 640 650 >>XP_016863442 (OMIM: 614141,615490) PREDICTED: triparti (623 aa) initn: 163 init1: 86 opt: 226 Z-score: 215.0 bits: 49.3 E(85289): 3.1e-05 Smith-Waterman score: 226; 24.2% identity (58.2% similar) in 273 aa overlap (124-391:359-620) 100 110 120 130 140 150 pF1KE3 GSALRQSPAAHRAAPSAPGALTCHHTFGGWGTLVNPTGLALCPKTGRVVVVHDGRRRVKI : ..: :.: .:..... .. . :.: XP_016 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVA-ASTNGKILIADSNNQCVQI 330 340 350 360 370 380 160 170 180 190 200 210 pF1KE3 FDSGGGCAHQFGEKGDAAQDIRYPVDVTITNDCHVVVTDAGDRSIKVFDFFGQIKLVIG- :.. : .:: .: . ... :. :.. . ....: .. ...:. :..: :: XP_016 FSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS 390 400 410 420 430 440 220 230 240 250 260 270 pF1KE3 GQFSLPWGVETTPQNG-IVVTDAEAGSLHLLDVDFAEGVLRRTERLQAHLCNPRGVAVSW :.. : :: .. .:: :.:.: .: . ... . : . . :. .. . : : . XP_016 GKLMGPKGV-SVDRNGHIIVVDNKACCVFIFQPN---G--KIVTRFGSRGNGDRQFAGT- 450 460 470 480 490 500 280 290 300 310 320 pF1KE3 LTGA--IAVLEHPLALGTGVCSTRVKVFSSSMQLVGQVDTFGLSLYFPSKITA-SAVTFD : : :: . . : . ::::.. ... . :: . ....: ..:. : XP_016 LDGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLK---FGSNGEGNGQFNAPTGVAVD 510 520 530 540 550 330 340 350 360 370 380 pF1KE3 HQGNVIVADTSGPAILCLGKPEEFPVPKPMVTHGLSHPVALTFTKENSLLVLDTASHSIK .::.:::: .. : . : . : : .:..:... ..: :...: .: XP_016 SNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLALTSDGHVVVADSGNHCFK 560 570 580 590 600 610 390 pF1KE3 VYKVDWG ::. XP_016 VYRYLQ 620 >>XP_006714228 (OMIM: 614141,615490) PREDICTED: triparti (623 aa) initn: 163 init1: 86 opt: 226 Z-score: 215.0 bits: 49.3 E(85289): 3.1e-05 Smith-Waterman score: 226; 24.2% identity (58.2% similar) in 273 aa overlap (124-391:359-620) 100 110 120 130 140 150 pF1KE3 GSALRQSPAAHRAAPSAPGALTCHHTFGGWGTLVNPTGLALCPKTGRVVVVHDGRRRVKI : ..: :.: .:..... .. . :.: XP_006 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVA-ASTNGKILIADSNNQCVQI 330 340 350 360 370 380 160 170 180 190 200 210 pF1KE3 FDSGGGCAHQFGEKGDAAQDIRYPVDVTITNDCHVVVTDAGDRSIKVFDFFGQIKLVIG- :.. : .:: .: . ... :. :.. . ....: .. ...:. :..: :: XP_006 FSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS 390 400 410 420 430 440 220 230 240 250 260 270 pF1KE3 GQFSLPWGVETTPQNG-IVVTDAEAGSLHLLDVDFAEGVLRRTERLQAHLCNPRGVAVSW :.. : :: .. .:: :.:.: .: . ... . : . . :. .. . : : . XP_006 GKLMGPKGV-SVDRNGHIIVVDNKACCVFIFQPN---G--KIVTRFGSRGNGDRQFAGT- 450 460 470 480 490 500 280 290 300 310 320 pF1KE3 LTGA--IAVLEHPLALGTGVCSTRVKVFSSSMQLVGQVDTFGLSLYFPSKITA-SAVTFD : : :: . . : . ::::.. ... . :: . ....: ..:. : XP_006 LDGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLK---FGSNGEGNGQFNAPTGVAVD 510 520 530 540 550 330 340 350 360 370 380 pF1KE3 HQGNVIVADTSGPAILCLGKPEEFPVPKPMVTHGLSHPVALTFTKENSLLVLDTASHSIK .::.:::: .. : . : . : : .:..:... ..: :...: .: XP_006 SNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLALTSDGHVVVADSGNHCFK 560 570 580 590 600 610 390 pF1KE3 VYKVDWG ::. XP_006 VYRYLQ 620 >>XP_011530100 (OMIM: 614141,615490) PREDICTED: triparti (748 aa) initn: 192 init1: 86 opt: 226 Z-score: 214.1 bits: 49.4 E(85289): 3.5e-05 Smith-Waterman score: 226; 24.2% identity (58.2% similar) in 273 aa overlap (124-391:484-745) 100 110 120 130 140 150 pF1KE3 GSALRQSPAAHRAAPSAPGALTCHHTFGGWGTLVNPTGLALCPKTGRVVVVHDGRRRVKI : ..: :.: .:..... .. . :.: XP_011 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVA-ASTNGKILIADSNNQCVQI 460 470 480 490 500 510 160 170 180 190 200 210 pF1KE3 FDSGGGCAHQFGEKGDAAQDIRYPVDVTITNDCHVVVTDAGDRSIKVFDFFGQIKLVIG- :.. : .:: .: . ... :. :.. . ....: .. ...:. :..: :: XP_011 FSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS 520 530 540 550 560 570 220 230 240 250 260 270 pF1KE3 GQFSLPWGVETTPQNG-IVVTDAEAGSLHLLDVDFAEGVLRRTERLQAHLCNPRGVAVSW :.. : :: .. .:: :.:.: .: . ... . : . . :. .. . : : . XP_011 GKLMGPKGV-SVDRNGHIIVVDNKACCVFIFQPN---G--KIVTRFGSRGNGDRQFAGT- 580 590 600 610 620 280 290 300 310 320 pF1KE3 LTGA--IAVLEHPLALGTGVCSTRVKVFSSSMQLVGQVDTFGLSLYFPSKITA-SAVTFD : : :: . . : . ::::.. ... . :: . ....: ..:. : XP_011 LDGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLK---FGSNGEGNGQFNAPTGVAVD 630 640 650 660 670 680 330 340 350 360 370 380 pF1KE3 HQGNVIVADTSGPAILCLGKPEEFPVPKPMVTHGLSHPVALTFTKENSLLVLDTASHSIK .::.:::: .. : . : . : : .:..:... ..: :...: .: XP_011 SNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLALTSDGHVVVADSGNHCFK 690 700 710 720 730 740 390 pF1KE3 VYKVDWG ::. XP_011 VYRYLQ >>XP_006714225 (OMIM: 614141,615490) PREDICTED: triparti (748 aa) initn: 192 init1: 86 opt: 226 Z-score: 214.1 bits: 49.4 E(85289): 3.5e-05 Smith-Waterman score: 226; 24.2% identity (58.2% similar) in 273 aa overlap (124-391:484-745) 100 110 120 130 140 150 pF1KE3 GSALRQSPAAHRAAPSAPGALTCHHTFGGWGTLVNPTGLALCPKTGRVVVVHDGRRRVKI : ..: :.: .:..... .. . :.: XP_006 PASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVA-ASTNGKILIADSNNQCVQI 460 470 480 490 500 510 160 170 180 190 200 210 pF1KE3 FDSGGGCAHQFGEKGDAAQDIRYPVDVTITNDCHVVVTDAGDRSIKVFDFFGQIKLVIG- :.. : .:: .: . ... :. :.. . ....: .. ...:. :..: :: XP_006 FSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGS 520 530 540 550 560 570 220 230 240 250 260 270 pF1KE3 GQFSLPWGVETTPQNG-IVVTDAEAGSLHLLDVDFAEGVLRRTERLQAHLCNPRGVAVSW :.. : :: .. .:: :.:.: .: . ... . : . . :. .. . : : . XP_006 GKLMGPKGV-SVDRNGHIIVVDNKACCVFIFQPN---G--KIVTRFGSRGNGDRQFAGT- 580 590 600 610 620 280 290 300 310 320 pF1KE3 LTGA--IAVLEHPLALGTGVCSTRVKVFSSSMQLVGQVDTFGLSLYFPSKITA-SAVTFD : : :: . . : . ::::.. ... . :: . ....: ..:. : XP_006 LDGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLK---FGSNGEGNGQFNAPTGVAVD 630 640 650 660 670 680 330 340 350 360 370 380 pF1KE3 HQGNVIVADTSGPAILCLGKPEEFPVPKPMVTHGLSHPVALTFTKENSLLVLDTASHSIK .::.:::: .. : . : . : : .:..:... ..: :...: .: XP_006 SNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLALTSDGHVVVADSGNHCFK 690 700 710 720 730 740 390 pF1KE3 VYKVDWG ::. XP_006 VYRYLQ 395 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 07:42:34 2016 done: Sun Nov 6 07:42:35 2016 Total Scan time: 9.030 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]