FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5452, 351 aa 1>>>pF1KE5452 351 - 351 aa - 351 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8679+/-0.000417; mu= 13.9091+/- 0.026 mean_var=130.2398+/-27.811, 0's: 0 Z-trim(115.2): 295 B-trim: 1273 in 2/53 Lambda= 0.112383 statistics sampled from 25197 (25572) to 25197 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.669), E-opt: 0.2 (0.3), width: 16 Scan time: 6.290 The best scores are: opt bits E(85289) NP_115737 (OMIM: 606929) THO complex subunit 3 [Ho ( 351) 2440 407.3 2.7e-113 XP_016865474 (OMIM: 606929) PREDICTED: THO complex ( 263) 1840 309.8 4.2e-84 NP_001186706 (OMIM: 614784,615973) POC1 centriolar ( 436) 338 66.6 1.2e-10 NP_758440 (OMIM: 614784,615973) POC1 centriolar pr ( 478) 338 66.6 1.3e-10 XP_016861593 (OMIM: 614783,614813) PREDICTED: POC1 ( 321) 311 62.0 2e-09 NP_001155052 (OMIM: 614783,614813) POC1 centriolar ( 359) 311 62.1 2.2e-09 NP_001155053 (OMIM: 614783,614813) POC1 centriolar ( 369) 305 61.1 4.4e-09 NP_056241 (OMIM: 614783,614813) POC1 centriolar pr ( 407) 305 61.2 4.7e-09 XP_011531864 (OMIM: 614783,614813) PREDICTED: POC1 ( 300) 290 58.6 2.1e-08 XP_011531863 (OMIM: 614783,614813) PREDICTED: POC1 ( 326) 288 58.3 2.7e-08 XP_011531862 (OMIM: 614783,614813) PREDICTED: POC1 ( 374) 288 58.4 3e-08 XP_011543873 (OMIM: 300196) PREDICTED: F-box-like/ ( 526) 289 58.7 3.3e-08 NP_001132939 (OMIM: 300196) F-box-like/WD repeat-c ( 526) 289 58.7 3.3e-08 NP_001132940 (OMIM: 300196) F-box-like/WD repeat-c ( 526) 289 58.7 3.3e-08 NP_001132938 (OMIM: 300196) F-box-like/WD repeat-c ( 577) 289 58.8 3.6e-08 NP_005638 (OMIM: 300196) F-box-like/WD repeat-cont ( 577) 289 58.8 3.6e-08 NP_001308124 (OMIM: 270710,602342,608628,616944) F ( 427) 279 57.0 9e-08 XP_016862674 (OMIM: 270710,602342,608628,616944) P ( 514) 279 57.1 1e-07 XP_011511445 (OMIM: 270710,602342,608628,616944) P ( 514) 279 57.1 1e-07 NP_078941 (OMIM: 270710,602342,608628,616944) F-bo ( 514) 279 57.1 1e-07 XP_011511443 (OMIM: 270710,602342,608628,616944) P ( 514) 279 57.1 1e-07 NP_001308122 (OMIM: 270710,602342,608628,616944) F ( 514) 279 57.1 1e-07 XP_011511444 (OMIM: 270710,602342,608628,616944) P ( 514) 279 57.1 1e-07 NP_001308123 (OMIM: 270710,602342,608628,616944) F ( 514) 279 57.1 1e-07 XP_006713809 (OMIM: 270710,602342,608628,616944) P ( 514) 279 57.1 1e-07 XP_005247832 (OMIM: 270710,602342,608628,616944) P ( 514) 279 57.1 1e-07 NP_150600 (OMIM: 400033) F-box-like/WD repeat-cont ( 522) 271 55.8 2.5e-07 NP_599020 (OMIM: 400033) F-box-like/WD repeat-cont ( 522) 271 55.8 2.5e-07 NP_599021 (OMIM: 400033) F-box-like/WD repeat-cont ( 522) 271 55.8 2.5e-07 XP_005262629 (OMIM: 400033) PREDICTED: F-box-like/ ( 536) 271 55.8 2.6e-07 XP_016885576 (OMIM: 400033) PREDICTED: F-box-like/ ( 540) 271 55.8 2.6e-07 XP_016885575 (OMIM: 400033) PREDICTED: F-box-like/ ( 577) 271 55.8 2.7e-07 XP_016860389 (OMIM: 612173) PREDICTED: sperm-assoc ( 323) 267 54.9 2.9e-07 XP_016860390 (OMIM: 612173) PREDICTED: sperm-assoc ( 323) 267 54.9 2.9e-07 XP_016860391 (OMIM: 612173) PREDICTED: sperm-assoc ( 323) 267 54.9 2.9e-07 XP_011510137 (OMIM: 612173) PREDICTED: sperm-assoc ( 323) 267 54.9 2.9e-07 XP_016860387 (OMIM: 612173) PREDICTED: sperm-assoc ( 390) 267 55.0 3.3e-07 XP_016860385 (OMIM: 612173) PREDICTED: sperm-assoc ( 512) 267 55.1 3.9e-07 XP_016860386 (OMIM: 612173) PREDICTED: sperm-assoc ( 512) 267 55.1 3.9e-07 XP_011510124 (OMIM: 612173) PREDICTED: sperm-assoc ( 528) 267 55.1 4e-07 XP_011510125 (OMIM: 612173) PREDICTED: sperm-assoc ( 528) 267 55.1 4e-07 XP_011510123 (OMIM: 612173) PREDICTED: sperm-assoc ( 537) 267 55.1 4e-07 XP_011510121 (OMIM: 612173) PREDICTED: sperm-assoc ( 577) 267 55.2 4.2e-07 XP_011510116 (OMIM: 612173) PREDICTED: sperm-assoc ( 600) 267 55.2 4.3e-07 NP_078808 (OMIM: 612173) sperm-associated antigen ( 631) 267 55.2 4.5e-07 XP_016878352 (OMIM: 602703,616212) PREDICTED: kata ( 655) 259 53.9 1.1e-06 XP_016878353 (OMIM: 602703,616212) PREDICTED: kata ( 655) 259 53.9 1.1e-06 NP_005877 (OMIM: 602703,616212) katanin p80 WD40 r ( 655) 259 53.9 1.1e-06 XP_006721186 (OMIM: 602703,616212) PREDICTED: kata ( 658) 259 54.0 1.1e-06 XP_005255829 (OMIM: 602703,616212) PREDICTED: kata ( 672) 259 54.0 1.1e-06 >>NP_115737 (OMIM: 606929) THO complex subunit 3 [Homo s (351 aa) initn: 2440 init1: 2440 opt: 2440 Z-score: 2155.1 bits: 407.3 E(85289): 2.7e-113 Smith-Waterman score: 2440; 100.0% identity (100.0% similar) in 351 aa overlap (1-351:1-351) 10 20 30 40 50 60 pF1KE5 MAVPAAAMGPSALGQSGPGSMAPWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 MAVPAAAMGPSALGQSGPGSMAPWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 VAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 VAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 DKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 DKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 FKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 FKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 TGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 TGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDK 250 260 270 280 290 300 310 320 330 340 350 pF1KE5 LWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS ::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 LWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS 310 320 330 340 350 >>XP_016865474 (OMIM: 606929) PREDICTED: THO complex sub (263 aa) initn: 1840 init1: 1840 opt: 1840 Z-score: 1630.9 bits: 309.8 E(85289): 4.2e-84 Smith-Waterman score: 1840; 99.6% identity (100.0% similar) in 263 aa overlap (89-351:1-263) 60 70 80 90 100 110 pF1KE5 HSVAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTA .::::::::::::::::::::::::::::: XP_016 MVKENNYRGHGDSVDQLCWHPSNPDLFVTA 10 20 30 120 130 140 150 160 170 pF1KE5 SGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAE 40 50 60 70 80 90 180 190 200 210 220 230 pF1KE5 EQFKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EQFKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKY 100 110 120 130 140 150 240 250 260 270 280 290 pF1KE5 FATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETG 160 170 180 190 200 210 300 310 320 330 340 350 pF1KE5 DKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS ::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS 220 230 240 250 260 >>NP_001186706 (OMIM: 614784,615973) POC1 centriolar pro (436 aa) initn: 374 init1: 128 opt: 338 Z-score: 312.1 bits: 66.6 E(85289): 1.2e-10 Smith-Waterman score: 338; 29.9% identity (61.9% similar) in 278 aa overlap (43-309:50-317) 20 30 40 50 60 70 pF1KE5 LGQSGPGSMAPWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLAS :: : :: ::.: :.:: .: ::. ::. NP_001 VVTSVQFSPHGNLLASASRDRTVRLWIPDKRG--KFSEFKAHTAPVRSVDFSADGQFLAT 20 30 40 50 60 70 80 90 100 110 120 130 pF1KE5 GSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPD--LFVTASGDKTIRIWDVR .: ::. .:. . ..:.. . :: : : : . : :: :.:. : ::::.:::. NP_001 ASEDKSIKVWSMYRQRFLY-SLYR-HTHWVR--CAKFS-PDGRLIVSCSEDKTIKIWDTT 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 TTKCIATV-NTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFE-VNEI . .:. . .. : . ..:.: :: ...:..: :..... . : . :: : NP_001 NKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCI 140 150 160 170 180 190 190 200 210 220 230 240 pF1KE5 SWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADALV :.. ..:... ....: ..::. : . . ....: . . ..:. :. ::.:.::. : NP_001 SFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQV 200 210 220 230 240 250 250 260 270 280 290 300 pF1KE5 SLW--DVDELVCVRCFSRLDWPVRTLSFSHDGKML---ASASEDHFIDIAEVETGDKLW- :: . ::: : . ... . .. : :. ..: . . : . :: . :: NP_001 LLWRTNFDELHC-KGLTKRN--LKRLHFDSPPHLLDIYPRTPHPHEEKVETVEINPKLEV 260 270 280 290 300 310 320 330 340 350 pF1KE5 -EVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS ..: .: NP_001 IDLQISTPPVMDILSFDSTTTTETSGRTLPDKGEEACGYFLNPSLMSPECLPTTTKKKTE 310 320 330 340 350 360 >>NP_758440 (OMIM: 614784,615973) POC1 centriolar protei (478 aa) initn: 402 init1: 128 opt: 338 Z-score: 311.7 bits: 66.6 E(85289): 1.3e-10 Smith-Waterman score: 338; 29.9% identity (61.9% similar) in 278 aa overlap (43-309:92-359) 20 30 40 50 60 70 pF1KE5 LGQSGPGSMAPWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLAS :: : :: ::.: :.:: .: ::. ::. NP_758 VVTSVQFSPHGNLLASASRDRTVRLWIPDKRG--KFSEFKAHTAPVRSVDFSADGQFLAT 70 80 90 100 110 80 90 100 110 120 130 pF1KE5 GSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPD--LFVTASGDKTIRIWDVR .: ::. .:. . ..:.. . :: : : : . : :: :.:. : ::::.:::. NP_758 ASEDKSIKVWSMYRQRFLY-SLYR-HTHWVR--CAKFS-PDGRLIVSCSEDKTIKIWDTT 120 130 140 150 160 170 140 150 160 170 180 pF1KE5 TTKCIATV-NTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFE-VNEI . .:. . .. : . ..:.: :: ...:..: :..... . : . :: : NP_758 NKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCI 180 190 200 210 220 230 190 200 210 220 230 240 pF1KE5 SWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADALV :.. ..:... ....: ..::. : . . ....: . . ..:. :. ::.:.::. : NP_758 SFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQV 240 250 260 270 280 290 250 260 270 280 290 300 pF1KE5 SLW--DVDELVCVRCFSRLDWPVRTLSFSHDGKML---ASASEDHFIDIAEVETGDKLW- :: . ::: : . ... . .. : :. ..: . . : . :: . :: NP_758 LLWRTNFDELHC-KGLTKRN--LKRLHFDSPPHLLDIYPRTPHPHEEKVETVEINPKLEV 300 310 320 330 340 350 310 320 330 340 350 pF1KE5 -EVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS ..: .: NP_758 IDLQISTPPVMDILSFDSTTTTETSGRTLPDKGEEACGYFLNPSLMSPECLPTTTKKKTE 360 370 380 390 400 410 >>XP_016861593 (OMIM: 614783,614813) PREDICTED: POC1 cen (321 aa) initn: 232 init1: 87 opt: 311 Z-score: 290.0 bits: 62.0 E(85289): 2e-09 Smith-Waterman score: 311; 27.9% identity (62.1% similar) in 269 aa overlap (43-306:55-308) 20 30 40 50 60 70 pF1KE5 LGQSGPGSMAPWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLAS .:.: . : ::.: :.:: . ::. ... XP_016 AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQSFVT 30 40 50 60 70 80 80 90 100 110 120 130 pF1KE5 GSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPD--LFVTASGDKTIRIWDVR .: :::..:. ...... . : . : : . : :: :.:.:: :::...:: XP_016 ASDDKTVKVWATHRQKFLF--SLSQHINWVR--CAKFS-PDGRLIVSASDDKTVKLWDKS 90 100 110 120 130 140 150 160 170 180 pF1KE5 TTKCIATVNTKGENIN-ICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFE-VNEI . .:. . .: .. . . :.: ::... :..: :..::: . :.. :: . XP_016 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGL 140 150 160 170 180 190 190 200 210 220 230 240 pF1KE5 SWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADALV :.. ..:... ..... ..::. : . . ....: . . :. :.:::.:..: : XP_016 SFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 200 210 220 230 240 250 250 260 270 280 290 300 pF1KE5 SLWDVD-ELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEVQCE .: . ..: ... : ::. : :.. .: :... . : ::: :: XP_016 MVWKSNFDIVDHGEVTKVPRPPATLASSM-GNLTVSILEQRL-----TLTEDKL--KQCL 260 270 280 290 300 310 320 330 340 350 pF1KE5 SPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS XP_016 ENQQLIMQRATP 310 320 >>NP_001155052 (OMIM: 614783,614813) POC1 centriolar pro (359 aa) initn: 232 init1: 87 opt: 311 Z-score: 289.5 bits: 62.1 E(85289): 2.2e-09 Smith-Waterman score: 311; 27.9% identity (62.1% similar) in 269 aa overlap (43-306:93-346) 20 30 40 50 60 70 pF1KE5 LGQSGPGSMAPWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLAS .:.: . : ::.: :.:: . ::. ... NP_001 AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQSFVT 70 80 90 100 110 120 80 90 100 110 120 130 pF1KE5 GSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPD--LFVTASGDKTIRIWDVR .: :::..:. ...... . : . : : . : :: :.:.:: :::...:: NP_001 ASDDKTVKVWATHRQKFLF--SLSQHINWVR--CAKFS-PDGRLIVSASDDKTVKLWDKS 130 140 150 160 170 140 150 160 170 180 pF1KE5 TTKCIATVNTKGENIN-ICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFE-VNEI . .:. . .: .. . . :.: ::... :..: :..::: . :.. :: . NP_001 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGL 180 190 200 210 220 230 190 200 210 220 230 240 pF1KE5 SWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADALV :.. ..:... ..... ..::. : . . ....: . . :. :.:::.:..: : NP_001 SFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 240 250 260 270 280 290 250 260 270 280 290 300 pF1KE5 SLWDVD-ELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEVQCE .: . ..: ... : ::. : :.. .: :... . : ::: :: NP_001 MVWKSNFDIVDHGEVTKVPRPPATLASSM-GNLTVSILEQRL-----TLTEDKL--KQCL 300 310 320 330 340 310 320 330 340 350 pF1KE5 SPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS NP_001 ENQQLIMQRATP 350 >>NP_001155053 (OMIM: 614783,614813) POC1 centriolar pro (369 aa) initn: 232 init1: 87 opt: 305 Z-score: 284.1 bits: 61.1 E(85289): 4.4e-09 Smith-Waterman score: 305; 27.7% identity (63.4% similar) in 238 aa overlap (43-275:55-285) 20 30 40 50 60 70 pF1KE5 LGQSGPGSMAPWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLAS .:.: . : ::.: :.:: . ::. ... NP_001 AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQSFVT 30 40 50 60 70 80 80 90 100 110 120 130 pF1KE5 GSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPD--LFVTASGDKTIRIWDVR .: :::..:. ...... . : . : : . : :: :.:.:: :::...:: NP_001 ASDDKTVKVWATHRQKFL--FSLSQHINWVR--CAKFS-PDGRLIVSASDDKTVKLWDKS 90 100 110 120 130 140 150 160 170 180 pF1KE5 TTKCIATVNTKGENIN-ICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFE-VNEI . .:. . .: .. . . :.: ::... :..: :..::: . :.. :: . NP_001 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGL 140 150 160 170 180 190 190 200 210 220 230 240 pF1KE5 SWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADALV :.. ..:... ..... ..::. : . . ....: . . :. :.:::.:..: : NP_001 SFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 200 210 220 230 240 250 250 260 270 280 290 300 pF1KE5 SLWDVD-ELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEVQCE .: . ..: ... : ::. : NP_001 MVWKSNFDIVDHGEVTKVPRPPATLASSMGNLPEVDFPVPPGRGRSVESVQSQPQEPVSV 260 270 280 290 300 310 >>NP_056241 (OMIM: 614783,614813) POC1 centriolar protei (407 aa) initn: 232 init1: 87 opt: 305 Z-score: 283.6 bits: 61.2 E(85289): 4.7e-09 Smith-Waterman score: 305; 27.7% identity (63.4% similar) in 238 aa overlap (43-275:93-323) 20 30 40 50 60 70 pF1KE5 LGQSGPGSMAPWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLAS .:.: . : ::.: :.:: . ::. ... NP_056 AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQSFVT 70 80 90 100 110 120 80 90 100 110 120 130 pF1KE5 GSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPD--LFVTASGDKTIRIWDVR .: :::..:. ...... . : . : : . : :: :.:.:: :::...:: NP_056 ASDDKTVKVWATHRQKFL--FSLSQHINWVR--CAKFS-PDGRLIVSASDDKTVKLWDKS 130 140 150 160 170 140 150 160 170 180 pF1KE5 TTKCIATVNTKGENIN-ICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFE-VNEI . .:. . .: .. . . :.: ::... :..: :..::: . :.. :: . NP_056 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGL 180 190 200 210 220 230 190 200 210 220 230 240 pF1KE5 SWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADALV :.. ..:... ..... ..::. : . . ....: . . :. :.:::.:..: : NP_056 SFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 240 250 260 270 280 290 250 260 270 280 290 300 pF1KE5 SLWDVD-ELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEVQCE .: . ..: ... : ::. : NP_056 MVWKSNFDIVDHGEVTKVPRPPATLASSMGNLPEVDFPVPPGRGRSVESVQSQPQEPVSV 300 310 320 330 340 350 >>XP_011531864 (OMIM: 614783,614813) PREDICTED: POC1 cen (300 aa) initn: 232 init1: 87 opt: 290 Z-score: 272.0 bits: 58.6 E(85289): 2.1e-08 Smith-Waterman score: 291; 27.5% identity (64.4% similar) in 222 aa overlap (43-260:93-299) 20 30 40 50 60 70 pF1KE5 LGQSGPGSMAPWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLAS .:.: . : ::.: :.:: . ::. ... XP_011 AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQSFVT 70 80 90 100 110 120 80 90 100 110 120 130 pF1KE5 GSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPD--LFVTASGDKTIRIWDVR .: :::..:. ...... . : . : : . : :: :.:.:: :::...:: XP_011 ASDDKTVKVWATHRQKFL--FSLSQHINWVR--CAKFS-PDGRLIVSASDDKTVKLWDKS 130 140 150 160 170 140 150 160 170 180 pF1KE5 TTKCIATVNTKGENIN-ICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFE-VNEI . .:. . .: .. . . :.: ::... :..: :..::: . :.. :: . XP_011 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGL 180 190 200 210 220 230 190 200 210 220 230 240 pF1KE5 SWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADALV :.. ..:... ..... ..::. : . . ....: . . :. :.:::.:..: XP_011 SFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSD--- 240 250 260 270 280 290 250 260 270 280 290 300 pF1KE5 SLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEVQCES ....:.: XP_011 -----EQVICARP 300 >>XP_011531863 (OMIM: 614783,614813) PREDICTED: POC1 cen (326 aa) initn: 232 init1: 87 opt: 288 Z-score: 269.8 bits: 58.3 E(85289): 2.7e-08 Smith-Waterman score: 288; 28.5% identity (65.7% similar) in 207 aa overlap (43-245:93-292) 20 30 40 50 60 70 pF1KE5 LGQSGPGSMAPWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLAS .:.: . : ::.: :.:: . ::. ... XP_011 AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDGQSFVT 70 80 90 100 110 120 80 90 100 110 120 130 pF1KE5 GSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPD--LFVTASGDKTIRIWDVR .: :::..:. ...... . : . : : . : :: :.:.:: :::...:: XP_011 ASDDKTVKVWATHRQKFL--FSLSQHINWVR--CAKFS-PDGRLIVSASDDKTVKLWDKS 130 140 150 160 170 140 150 160 170 180 pF1KE5 TTKCIATVNTKGENIN-ICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFE-VNEI . .:. . .: .. . . :.: ::... :..: :..::: . :.. :: . XP_011 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGL 180 190 200 210 220 230 190 200 210 220 230 240 pF1KE5 SWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADALV :.. ..:... ..... ..::. : . . ....: . . :. :.:::.:..: XP_011 SFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQT 240 250 260 270 280 290 250 260 270 280 290 300 pF1KE5 SLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEVQCES XP_011 VSILEQRLTLTEDKLKQCLENQQLIMQRATP 300 310 320 351 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 00:54:21 2016 done: Tue Nov 8 00:54:22 2016 Total Scan time: 6.290 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]