FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5452, 351 aa 1>>>pF1KE5452 351 - 351 aa - 351 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.8204+/-0.000991; mu= 8.4525+/- 0.058 mean_var=129.0562+/-26.798, 0's: 0 Z-trim(108.3): 150 B-trim: 0 in 0/50 Lambda= 0.112898 statistics sampled from 9917 (10096) to 9917 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.677), E-opt: 0.2 (0.31), width: 16 Scan time: 1.700 The best scores are: opt bits E(32554) CCDS4397.1 THOC3 gene_id:84321|Hs108|chr5 ( 351) 2440 409.0 3.1e-114 CCDS3012.1 WDR5B gene_id:54554|Hs108|chr3 ( 330) 338 66.6 3.4e-11 CCDS55859.1 POC1B gene_id:282809|Hs108|chr12 ( 436) 338 66.7 4.2e-11 CCDS31869.1 POC1B gene_id:282809|Hs108|chr12 ( 478) 338 66.7 4.6e-11 >>CCDS4397.1 THOC3 gene_id:84321|Hs108|chr5 (351 aa) initn: 2440 init1: 2440 opt: 2440 Z-score: 2164.3 bits: 409.0 E(32554): 3.1e-114 Smith-Waterman score: 2440; 100.0% identity (100.0% similar) in 351 aa overlap (1-351:1-351) 10 20 30 40 50 60 pF1KE5 MAVPAAAMGPSALGQSGPGSMAPWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MAVPAAAMGPSALGQSGPGSMAPWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 VAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 VAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 DKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 DKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 FKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 FKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 TGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 TGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDK 250 260 270 280 290 300 310 320 330 340 350 pF1KE5 LWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS 310 320 330 340 350 >>CCDS3012.1 WDR5B gene_id:54554|Hs108|chr3 (330 aa) initn: 297 init1: 114 opt: 338 Z-score: 314.4 bits: 66.6 E(32554): 3.4e-11 Smith-Waterman score: 338; 26.3% identity (61.2% similar) in 289 aa overlap (51-330:37-320) 30 40 50 60 70 80 pF1KE5 MAPWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLASGSFDKTAS ...:. : :: .: .:. :::.: :. CCDS30 RDAKAQLALSSSANQSKEVPENPNYALKCTLVGHTEAVSSVKFSPNGEWLASSSADRLII 10 20 30 40 50 60 90 100 110 120 130 140 pF1KE5 VFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNT .. . :.. ::. .... : :. . .:.:: :::...::::. ::. :.. CCDS30 IWGAYDGKY--EKTLYGHNLEISDVAWS-SDSSRLVSASDDKTLKLWDVRSGKCLKTLKG 70 80 90 100 110 120 150 160 170 180 190 pF1KE5 KGENINIC-WSPDGQTIAVGNKDDVVTFIDAKTHRS-KAEEQFKFEVNEISWNNDNNMFF ... . : ..: .. : :. :..: . ..:: . :. . :. . .: ..... CCDS30 HSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIV 130 140 150 160 170 180 200 210 220 230 240 250 pF1KE5 LTNGNG-C--INILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDE . .: : . : :: . . . : . .::.: :::. :.. : ..::: .. CCDS30 SGSYDGLCRIWDAASGQCLKTLVDDDNPPVSF--VKFSPNGKYILTATLDNTLKLWDYSR 190 200 210 220 230 240 260 270 280 290 300 310 pF1KE5 LVCVRCFS--RLDWPVRTLSFS-HDGKMLASASEDHFIDIAEVETGDKLWEVQCESPT-F :.. .. . . .:: :: ..:.:::... : ...: . . ..: .. . . CCDS30 GRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVI 250 260 270 280 290 300 320 330 340 350 pF1KE5 TVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS ..: :: . :.: : ..: CCDS30 SAACHPTENLIASAALENDKTIKLWMSNH 310 320 330 >>CCDS55859.1 POC1B gene_id:282809|Hs108|chr12 (436 aa) initn: 374 init1: 128 opt: 338 Z-score: 312.7 bits: 66.7 E(32554): 4.2e-11 Smith-Waterman score: 338; 29.9% identity (61.9% similar) in 278 aa overlap (43-309:50-317) 20 30 40 50 60 70 pF1KE5 LGQSGPGSMAPWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLAS :: : :: ::.: :.:: .: ::. ::. CCDS55 VVTSVQFSPHGNLLASASRDRTVRLWIPDKRG--KFSEFKAHTAPVRSVDFSADGQFLAT 20 30 40 50 60 70 80 90 100 110 120 130 pF1KE5 GSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPD--LFVTASGDKTIRIWDVR .: ::. .:. . ..:.. . :: : : : . : :: :.:. : ::::.:::. CCDS55 ASEDKSIKVWSMYRQRFLY-SLYR-HTHWVR--CAKFS-PDGRLIVSCSEDKTIKIWDTT 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 TTKCIATV-NTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFE-VNEI . .:. . .. : . ..:.: :: ...:..: :..... . : . :: : CCDS55 NKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCI 140 150 160 170 180 190 190 200 210 220 230 240 pF1KE5 SWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADALV :.. ..:... ....: ..::. : . . ....: . . ..:. :. ::.:.::. : CCDS55 SFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQV 200 210 220 230 240 250 250 260 270 280 290 300 pF1KE5 SLW--DVDELVCVRCFSRLDWPVRTLSFSHDGKML---ASASEDHFIDIAEVETGDKLW- :: . ::: : . ... . .. : :. ..: . . : . :: . :: CCDS55 LLWRTNFDELHC-KGLTKRN--LKRLHFDSPPHLLDIYPRTPHPHEEKVETVEINPKLEV 260 270 280 290 300 310 320 330 340 350 pF1KE5 -EVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS ..: .: CCDS55 IDLQISTPPVMDILSFDSTTTTETSGRTLPDKGEEACGYFLNPSLMSPECLPTTTKKKTE 310 320 330 340 350 360 >>CCDS31869.1 POC1B gene_id:282809|Hs108|chr12 (478 aa) initn: 402 init1: 128 opt: 338 Z-score: 312.2 bits: 66.7 E(32554): 4.6e-11 Smith-Waterman score: 338; 29.9% identity (61.9% similar) in 278 aa overlap (43-309:92-359) 20 30 40 50 60 70 pF1KE5 LGQSGPGSMAPWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLAS :: : :: ::.: :.:: .: ::. ::. CCDS31 VVTSVQFSPHGNLLASASRDRTVRLWIPDKRG--KFSEFKAHTAPVRSVDFSADGQFLAT 70 80 90 100 110 80 90 100 110 120 130 pF1KE5 GSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPD--LFVTASGDKTIRIWDVR .: ::. .:. . ..:.. . :: : : : . : :: :.:. : ::::.:::. CCDS31 ASEDKSIKVWSMYRQRFLY-SLYR-HTHWVR--CAKFS-PDGRLIVSCSEDKTIKIWDTT 120 130 140 150 160 170 140 150 160 170 180 pF1KE5 TTKCIATV-NTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFE-VNEI . .:. . .. : . ..:.: :: ...:..: :..... . : . :: : CCDS31 NKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCI 180 190 200 210 220 230 190 200 210 220 230 240 pF1KE5 SWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADALV :.. ..:... ....: ..::. : . . ....: . . ..:. :. ::.:.::. : CCDS31 SFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQV 240 250 260 270 280 290 250 260 270 280 290 300 pF1KE5 SLW--DVDELVCVRCFSRLDWPVRTLSFSHDGKML---ASASEDHFIDIAEVETGDKLW- :: . ::: : . ... . .. : :. ..: . . : . :: . :: CCDS31 LLWRTNFDELHC-KGLTKRN--LKRLHFDSPPHLLDIYPRTPHPHEEKVETVEINPKLEV 300 310 320 330 340 350 310 320 330 340 350 pF1KE5 -EVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS ..: .: CCDS31 IDLQISTPPVMDILSFDSTTTTETSGRTLPDKGEEACGYFLNPSLMSPECLPTTTKKKTE 360 370 380 390 400 410 351 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 00:54:21 2016 done: Tue Nov 8 00:54:21 2016 Total Scan time: 1.700 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]