FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6744, 144 aa 1>>>pF1KB6744 144 - 144 aa - 144 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.7963+/-0.000714; mu= 14.5467+/- 0.043 mean_var=64.7270+/-12.591, 0's: 0 Z-trim(109.6): 13 B-trim: 112 in 1/50 Lambda= 0.159416 statistics sampled from 10994 (10997) to 10994 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.72), E-opt: 0.2 (0.338), width: 16 Scan time: 1.200 The best scores are: opt bits E(32554) CCDS4189.1 IL9 gene_id:3578|Hs108|chr5 ( 144) 976 232.4 7.5e-62 >>CCDS4189.1 IL9 gene_id:3578|Hs108|chr5 (144 aa) initn: 976 init1: 976 opt: 976 Z-score: 1223.9 bits: 232.4 E(32554): 7.5e-62 Smith-Waterman score: 976; 100.0% identity (100.0% similar) in 144 aa overlap (1-144:1-144) 10 20 30 40 50 60 pF1KB6 MLLAMVLTSALLLCSVAGQGCPTLAGILDINFLINKMQEDPASKCHCSANVTSCLCLGIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MLLAMVLTSALLLCSVAGQGCPTLAGILDINFLINKMQEDPASKCHCSANVTSCLCLGIP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 SDNCTRPCFSERLSQMTNTTMQTRYPLIFSRVKKSVEVLKNNKCPYFSCEQPCNQTTAGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 SDNCTRPCFSERLSQMTNTTMQTRYPLIFSRVKKSVEVLKNNKCPYFSCEQPCNQTTAGN 70 80 90 100 110 120 130 140 pF1KB6 ALTFLKSLLEIFQKEKMRGMRGKI :::::::::::::::::::::::: CCDS41 ALTFLKSLLEIFQKEKMRGMRGKI 130 140 144 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:21:52 2016 done: Mon Nov 7 22:21:52 2016 Total Scan time: 1.200 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]