FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4305, 305 aa 1>>>pF1KE4305 305 - 305 aa - 305 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0109+/-0.000372; mu= 17.0033+/- 0.023 mean_var=61.9463+/-12.596, 0's: 0 Z-trim(113.1): 48 B-trim: 0 in 0/51 Lambda= 0.162955 statistics sampled from 22216 (22264) to 22216 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.633), E-opt: 0.2 (0.261), width: 16 Scan time: 6.710 The best scores are: opt bits E(85289) NP_006571 (OMIM: 248250,603959) claudin-16 [Homo s ( 305) 2111 504.8 8.6e-143 NP_001298 (OMIM: 609131) claudin-7 isoform 1 precu ( 211) 292 77.1 3.4e-14 NP_001171951 (OMIM: 609131) claudin-7 isoform 1 pr ( 211) 292 77.1 3.4e-14 NP_066924 (OMIM: 603718,607626) claudin-1 [Homo sa ( 211) 280 74.3 2.4e-13 NP_001172009 (OMIM: 615778) claudin-15 [Homo sapie ( 228) 259 69.4 7.9e-12 NP_055158 (OMIM: 615778) claudin-15 [Homo sapiens] ( 228) 259 69.4 7.9e-12 NP_001296 (OMIM: 602909) claudin-4 [Homo sapiens] ( 209) 232 63.0 6e-10 NP_066192 (OMIM: 615799) claudin-9 [Homo sapiens] ( 217) 230 62.5 8.5e-10 NP_955360 (OMIM: 611231) claudin-8 [Homo sapiens] ( 225) 229 62.3 1e-09 NP_057453 (OMIM: 609210) claudin-18 isoform 1 prec ( 261) 226 61.6 1.9e-09 NP_001297 (OMIM: 602910) claudin-3 [Homo sapiens] ( 220) 225 61.3 1.9e-09 NP_683763 (OMIM: 248190,610036) claudin-19 isoform ( 224) 225 61.4 2e-09 NP_001116867 (OMIM: 248190,610036) claudin-19 isof ( 211) 224 61.1 2.2e-09 NP_067018 (OMIM: 615798) claudin-6 precursor [Homo ( 220) 221 60.4 3.7e-09 NP_652763 (OMIM: 605608,614035) claudin-14 [Homo s ( 239) 216 59.3 9e-09 NP_001139551 (OMIM: 605608,614035) claudin-14 [Hom ( 239) 216 59.3 9e-09 NP_001139550 (OMIM: 605608,614035) claudin-14 [Hom ( 239) 216 59.3 9e-09 NP_001139549 (OMIM: 605608,614035) claudin-14 [Hom ( 239) 216 59.3 9e-09 NP_036262 (OMIM: 605608,614035) claudin-14 [Homo s ( 239) 216 59.3 9e-09 NP_001164563 (OMIM: 300520) claudin-2 [Homo sapien ( 230) 210 57.8 2.3e-08 NP_001164566 (OMIM: 300520) claudin-2 [Homo sapien ( 230) 210 57.8 2.3e-08 NP_065117 (OMIM: 300520) claudin-2 [Homo sapiens] ( 230) 210 57.8 2.3e-08 NP_001002026 (OMIM: 609210) claudin-18 isoform 2 [ ( 261) 207 57.2 4.2e-08 NP_001171952 (OMIM: 609131) claudin-7 isoform 2 pr ( 145) 195 54.2 1.8e-07 NP_036263 (OMIM: 617005) claudin-17 [Homo sapiens] ( 224) 167 47.7 2.5e-05 NP_001172002 (OMIM: 611232) claudin-12 [Homo sapie ( 244) 165 47.3 3.7e-05 NP_036261 (OMIM: 611232) claudin-12 [Homo sapiens] ( 244) 165 47.3 3.7e-05 NP_001172001 (OMIM: 611232) claudin-12 [Homo sapie ( 244) 165 47.3 3.7e-05 NP_001172046 (OMIM: 248190,610036) claudin-19 isof ( 218) 164 47.0 4e-05 NP_919260 (OMIM: 609203) claudin-23 [Homo sapiens] ( 292) 141 41.7 0.0022 >>NP_006571 (OMIM: 248250,603959) claudin-16 [Homo sapie (305 aa) initn: 2111 init1: 2111 opt: 2111 Z-score: 2684.6 bits: 504.8 E(85289): 8.6e-143 Smith-Waterman score: 2111; 100.0% identity (100.0% similar) in 305 aa overlap (1-305:1-305) 10 20 30 40 50 60 pF1KE4 MTSRTPLLVTACLYYSYCNSRHLQQGVRKSKRPVFSHCQVPETQKTDTRHLSGARAGVCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MTSRTPLLVTACLYYSYCNSRHLQQGVRKSKRPVFSHCQVPETQKTDTRHLSGARAGVCP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 CCHPDGLLATMRDLLQYIACFFAFFSAGFLIVATWTDCWMVNADDSLEVSTKCRGLWWEC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 CCHPDGLLATMRDLLQYIACFFAFFSAGFLIVATWTDCWMVNADDSLEVSTKCRGLWWEC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 VTNAFDGIRTCDEYDSILAEHPLKLVVTRALMITADILAGFGFLTLLLGLDCVKFLPDEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 VTNAFDGIRTCDEYDSILAEHPLKLVVTRALMITADILAGFGFLTLLLGLDCVKFLPDEP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 YIKVRICFVAGATLLIAGTPGIIGSVWYAVDVYVERSTLVLHNIFLGIQYKFGWSCWLGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 YIKVRICFVAGATLLIAGTPGIIGSVWYAVDVYVERSTLVLHNIFLGIQYKFGWSCWLGM 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 AGSLGCFLAGAVLTCCLYLFKDVGPERNYPYSLRKAYSAAGVSMAKSYSAPRTETAKMYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 AGSLGCFLAGAVLTCCLYLFKDVGPERNYPYSLRKAYSAAGVSMAKSYSAPRTETAKMYA 250 260 270 280 290 300 pF1KE4 VDTRV ::::: NP_006 VDTRV >>NP_001298 (OMIM: 609131) claudin-7 isoform 1 precursor (211 aa) initn: 280 init1: 126 opt: 292 Z-score: 375.8 bits: 77.1 E(85289): 3.4e-14 Smith-Waterman score: 292; 28.8% identity (62.9% similar) in 205 aa overlap (75-272:6-204) 50 60 70 80 90 100 pF1KE4 KTDTRHLSGARAGVCPCCHPDGLLATMRDLLQYIACFFAFFSAGFLIVATWTDCWMVNA- :: .. .:... :.. : :.... NP_001 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSY 10 20 30 110 120 130 140 150 160 pF1KE4 --DDSLEVSTKCRGLWWECVTNAFDGIRTCDEYDSILAEHPLKLVVTRALMITADILAGF :. . ... .::: .:::.. :. .: :::.:: : .:::::... .:. . NP_001 AGDNIITAQAMYKGLWMDCVTQS-TGMMSCKMYDSVLALSA-ALQATRALMVVSLVLGFL 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE4 GFLTLLLGLDCVKFLPDEPYIKVRICFVAGATLLIAGTPGIIGSVWYAVDVYVE-RSTLV .... .:. :.. :. :.:: . .: ...:: .... ::. .. .. . :. NP_001 AMFVATMGMKCTRCGGDDKVKKARIAMGGGIIFIVAGLAALVACSWYGHQIVTDFYNPLI 100 110 120 130 140 150 230 240 250 260 270 pF1KE4 LHNIFLGIQYKFGWSCWLGMAGSLGCFLAGAVLTC-CLYLFKDVGPE--RNYPYSLRKAY :: .:.:: . ..: ::: .:.::.:.: : . .: . :.:: : NP_001 PTNI----KYEFGPAIFIGWAGSALVILGGALLSCSCPGNESKAGYRVPRSYPKSNSSKE 160 170 180 190 200 280 290 300 pF1KE4 SAAGVSMAKSYSAPRTETAKMYAVDTRV NP_001 YV 210 >>NP_001171951 (OMIM: 609131) claudin-7 isoform 1 precur (211 aa) initn: 280 init1: 126 opt: 292 Z-score: 375.8 bits: 77.1 E(85289): 3.4e-14 Smith-Waterman score: 292; 28.8% identity (62.9% similar) in 205 aa overlap (75-272:6-204) 50 60 70 80 90 100 pF1KE4 KTDTRHLSGARAGVCPCCHPDGLLATMRDLLQYIACFFAFFSAGFLIVATWTDCWMVNA- :: .. .:... :.. : :.... NP_001 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSY 10 20 30 110 120 130 140 150 160 pF1KE4 --DDSLEVSTKCRGLWWECVTNAFDGIRTCDEYDSILAEHPLKLVVTRALMITADILAGF :. . ... .::: .:::.. :. .: :::.:: : .:::::... .:. . NP_001 AGDNIITAQAMYKGLWMDCVTQS-TGMMSCKMYDSVLALSA-ALQATRALMVVSLVLGFL 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE4 GFLTLLLGLDCVKFLPDEPYIKVRICFVAGATLLIAGTPGIIGSVWYAVDVYVE-RSTLV .... .:. :.. :. :.:: . .: ...:: .... ::. .. .. . :. NP_001 AMFVATMGMKCTRCGGDDKVKKARIAMGGGIIFIVAGLAALVACSWYGHQIVTDFYNPLI 100 110 120 130 140 150 230 240 250 260 270 pF1KE4 LHNIFLGIQYKFGWSCWLGMAGSLGCFLAGAVLTC-CLYLFKDVGPE--RNYPYSLRKAY :: .:.:: . ..: ::: .:.::.:.: : . .: . :.:: : NP_001 PTNI----KYEFGPAIFIGWAGSALVILGGALLSCSCPGNESKAGYRVPRSYPKSNSSKE 160 170 180 190 200 280 290 300 pF1KE4 SAAGVSMAKSYSAPRTETAKMYAVDTRV NP_001 YV 210 >>NP_066924 (OMIM: 603718,607626) claudin-1 [Homo sapien (211 aa) initn: 208 init1: 146 opt: 280 Z-score: 360.5 bits: 74.3 E(85289): 2.4e-13 Smith-Waterman score: 281; 27.4% identity (58.4% similar) in 219 aa overlap (74-288:8-210) 50 60 70 80 90 100 pF1KE4 QKTDTRHLSGARAGVCPCCHPDGLLATMRDLLQYIACFFAFFSAGFLIVATWTDCWMVNA :: .: :.....: ::.: : . . NP_066 MANAGLQLLGFILAFLGWIGA---IVSTALPQWRIYS 10 20 30 110 120 130 140 150 160 pF1KE4 ---DDSLEVSTKCRGLWWECVTNAFDGIRTCDEYDSILAEHPLKLVVTRALMITADILAG :. . ... .::: ::... :. : .::.: : .:::::... .:. NP_066 YAGDNIVTAQAMYEGLWMSCVSQSTGQIQ-CKVFDSLLNLSST-LQATRALMVVGILLGV 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE4 FGFLTLLLGLDCVKFLPDEPYIKVRICFVAGATLLIAGTPGIIGSVWYAVDVYVERSTLV ..... .:. :.: : :. :.:. ..:: .:.:: .....::. . : . NP_066 IAIFVATVGMKCMKCLEDDEVQKMRMAVIGGAIFLLAGLAILVATAWYGNRIVQEFYDPM 100 110 120 130 140 150 230 240 250 260 270 pF1KE4 LHNIFLGIQYKFGWSCWLGMAGSLGCFLAGAVLTC-CLYLFKDVGPERNYPYSLRKAYSA .. .:.:: . . : :.. :.:.::.: : : :... : . : NP_066 TP---VNARYEFGQALFTGWAAASLCLLGGALLCCSC--------PRKTTSYPTPRPYPK 160 170 180 190 200 280 290 300 pF1KE4 AGVSMAKSYSAPRTETAKMYAVDTRV . : .:.: NP_066 PAPSSGKDYV 210 >>NP_001172009 (OMIM: 615778) claudin-15 [Homo sapiens] (228 aa) initn: 171 init1: 133 opt: 259 Z-score: 333.4 bits: 69.4 E(85289): 7.9e-12 Smith-Waterman score: 259; 30.9% identity (59.9% similar) in 207 aa overlap (82-279:8-201) 60 70 80 90 100 pF1KE4 SGARAGVCPCCHPDGLLATMRDLLQYIACFFAFFSA--GFLI--VATWTDCWMVNA--DD :.:: : :.:. :. .. : :.. . NP_001 MSMAVETFGFFMATVGLLMLGVTLPNSYWRVSTVHGN 10 20 30 110 120 130 140 150 160 pF1KE4 SLEVSTKCRGLWWECVTNAFDGIRTCDEYDSILAEHPLKLVVTRALMITADILAGF-GFL . ..: ..::. :.:... :. .: :. :.:: . . ::::::: :: :: :.: NP_001 VITTNTIFENLWFSCATDSL-GVYNCWEFPSMLALSGY-IQACRALMITA-ILLGFLGLL 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE4 TLLLGLDCVKFLPDEPYIKVRICFVAGATLLIAGTPGIIGSVWYAVDVYVERSTLVLHNI . :: :... : :... .::: ..:: :... ::: .. . . . NP_001 LGIAGLRCTNIGGLELSRKAKLAATAGALHILAGICGMVAISWYAFNI----TRDFFDPL 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE4 FLGIQYKFGWSCWLGMAGSLGCFLAGAVL--TCCLYLFKDVGPERNYPYSLRKAYSAAGV . : .:..: . .:: ..:: .:.: : .:: : ... : :. :.: NP_001 YPGTKYELGPALYLGWSASLISILGGLCLCSACC------CGSDEDPAASARRPYQAPVS 160 170 180 190 200 290 300 pF1KE4 SMAKSYSAPRTETAKMYAVDTRV NP_001 VMPVATSDQEGDSSFGKYGRNAYV 210 220 >>NP_055158 (OMIM: 615778) claudin-15 [Homo sapiens] (228 aa) initn: 171 init1: 133 opt: 259 Z-score: 333.4 bits: 69.4 E(85289): 7.9e-12 Smith-Waterman score: 259; 30.9% identity (59.9% similar) in 207 aa overlap (82-279:8-201) 60 70 80 90 100 pF1KE4 SGARAGVCPCCHPDGLLATMRDLLQYIACFFAFFSA--GFLI--VATWTDCWMVNA--DD :.:: : :.:. :. .. : :.. . NP_055 MSMAVETFGFFMATVGLLMLGVTLPNSYWRVSTVHGN 10 20 30 110 120 130 140 150 160 pF1KE4 SLEVSTKCRGLWWECVTNAFDGIRTCDEYDSILAEHPLKLVVTRALMITADILAGF-GFL . ..: ..::. :.:... :. .: :. :.:: . . ::::::: :: :: :.: NP_055 VITTNTIFENLWFSCATDSL-GVYNCWEFPSMLALSGY-IQACRALMITA-ILLGFLGLL 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE4 TLLLGLDCVKFLPDEPYIKVRICFVAGATLLIAGTPGIIGSVWYAVDVYVERSTLVLHNI . :: :... : :... .::: ..:: :... ::: .. . . . NP_055 LGIAGLRCTNIGGLELSRKAKLAATAGALHILAGICGMVAISWYAFNI----TRDFFDPL 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE4 FLGIQYKFGWSCWLGMAGSLGCFLAGAVL--TCCLYLFKDVGPERNYPYSLRKAYSAAGV . : .:..: . .:: ..:: .:.: : .:: : ... : :. :.: NP_055 YPGTKYELGPALYLGWSASLISILGGLCLCSACC------CGSDEDPAASARRPYQAPVS 160 170 180 190 200 290 300 pF1KE4 SMAKSYSAPRTETAKMYAVDTRV NP_055 VMPVATSDQEGDSSFGKYGRNAYV 210 220 >>NP_001296 (OMIM: 602909) claudin-4 [Homo sapiens] (209 aa) initn: 135 init1: 46 opt: 232 Z-score: 299.6 bits: 63.0 E(85289): 6e-10 Smith-Waterman score: 262; 32.6% identity (59.6% similar) in 193 aa overlap (99-288:30-208) 70 80 90 100 110 120 pF1KE4 ATMRDLLQYIACFFAFFSAGFLIVATWTDCWMVNA---DDSLEVSTKCRGLWWECVTNAF : :.: .. . .: .::: .::... NP_001 MASMGLQVMGIALAVLGWLAVMLCCALPMWRVTAFIGSNIVTSQTIWEGLWMNCVVQS- 10 20 30 40 50 130 140 150 160 170 180 pF1KE4 DGIRTCDEYDSILAEHPLKLVVTRALMITADILAGFGFLTLLLGLDCVKFLPDEPYIKVR : : :::.:: : : ..:::.: . :.:..: : ..: :.. : :: :.. NP_001 TGQMQCKVYDSLLAL-PQDLQAARALVIISIIVAALGVLLSVVGGKCTNCLEDES-AKAK 60 70 80 90 100 110 190 200 210 220 230 240 pF1KE4 ICFVAGATLLIAGTPGIIGSVWYAVDVYVERSTLVLHNIFLGIQYKFGWSCWLGMAGSLG .:::...:.:: :. : : .. . . .. . : . ..: : ..: :.: : NP_001 TMIVAGVVFLLAGLMVIVPVSWTAHNIIQDFYNPLVAS---GQKREMGASLYVGWAAS-G 120 130 140 150 160 170 250 260 270 280 290 300 pF1KE4 CFLAGAVLTCCLYLFKDVGPERNYPYSLRKAYSAAGVSMAKSYSAPRTETAKMYAVDTRV .: :. : :: . :. . ::: . :::: . :..: NP_001 LLLLGGGLLCC-----NCPPRTDKPYSAK--YSAARSAAASNYV 180 190 200 >>NP_066192 (OMIM: 615799) claudin-9 [Homo sapiens] (217 aa) initn: 211 init1: 80 opt: 230 Z-score: 296.8 bits: 62.5 E(85289): 8.5e-10 Smith-Waterman score: 231; 32.5% identity (57.1% similar) in 191 aa overlap (99-285:30-208) 70 80 90 100 110 120 pF1KE4 ATMRDLLQYIACFFAFFSAGFLIVATWTDCWMVNA--DDSLEVSTKC-RGLWWECVTNAF : :.: .:. :. .::: ::... NP_066 MASTGLELLGMTLAVLGWLGTLVSCALPLWKVTAFIGNSIVVAQVVWEGLWMSCVVQS- 10 20 30 40 50 130 140 150 160 170 180 pF1KE4 DGIRTCDEYDSILAEHPLKLVVTRALMITADILAGFGFLTLLLGLDCVKFLPDEPYIKVR : : :::.:: : : ..::: . : .:: .:.:. . : .:. . :: :.: NP_066 TGQMQCKVYDSLLAL-PQDLQAARALCVIALLLALLGLLVAITGAQCTTCVEDEG-AKAR 60 70 80 90 100 110 190 200 210 220 230 240 pF1KE4 ICFVAGATLLIAGTPGIIGSVWYAVDVYVE-RSTLVLHNIFLGIQYKFGWSCWLGMAGSL : ..::. ::.:: .: : : . . . :: . ... ..: : .:: :.. NP_066 IVLTAGVILLLAGILVLIPVCWTAHAIIQDFYNPLVAE----ALKRELGASLYLGWAAAA 120 130 140 150 160 170 250 260 270 280 290 300 pF1KE4 GCFLAGAVLTCCLYLFKDVGPERNYPYSLRKAYSAAGVSMAKSYSAPRTETAKMYAVDTR .:.:..: :: :. . : . : .:: . : : NP_066 LLMLGGGLL-CCTC----PPPQVERPRGPRLGYSIPSRSGASGLDKRDYV 180 190 200 210 pF1KE4 V >>NP_955360 (OMIM: 611231) claudin-8 [Homo sapiens] (225 aa) initn: 123 init1: 49 opt: 229 Z-score: 295.3 bits: 62.3 E(85289): 1e-09 Smith-Waterman score: 229; 27.5% identity (60.8% similar) in 189 aa overlap (91-273:22-199) 70 80 90 100 110 pF1KE4 CCHPDGLLATMRDLLQYIACFFAFFSAGFLIVATWTDCWMVNA--DDSLEVSTKC-RGLW ...: : :.: .... : . .::: NP_955 MATHALEIAGLFLGGVGMVGTVAVTVMPQWRVSAFIENNIVVFENFWEGLW 10 20 30 40 50 120 130 140 150 160 170 pF1KE4 WECVTNAFDGIRT-CDEYDSILAEHPLKLVVTRALMITADILAGFGFLTLLLGLDCVKFL .:: .: .:: : :::.:: : : ..:.:: .:.... ..:. .::. :.. NP_955 MNCVRQA--NIRMQCKIYDSLLALSP-DLQAARGLMCAASVMSFLAFMMAILGMKCTRCT 60 70 80 90 100 180 190 200 210 220 230 pF1KE4 PDEPYIKVRICFVAGATLLIAGTPGIIGSVWYAVDVYVERSTLVLHNIFLGIQYK--FGW :. .:..: ..:: ..:.: .: : : . . ..: .... : .: NP_955 GDNEKVKAHILLTAGIIFIITGMVVLIPVSWVANAIIRD-----FYNSIVNVAQKRELGE 110 120 130 140 150 160 240 250 260 270 280 290 pF1KE4 SCWLGMAGSLGCFLAGAVLTCCLYLFKDVGPERNYPYSLRKAYSAAGVSMAKSYSAPRTE . .:: . .: ...:..: ::.. .. .: ::. NP_955 ALYLGWTTAL-VLIVGGALFCCVFCCNE--KSSSYRYSIPSHRTTQKSYHTGKKSPSVYS 170 180 190 200 210 220 300 pF1KE4 TAKMYAVDTRV NP_955 RSQYV >>NP_057453 (OMIM: 609210) claudin-18 isoform 1 precurso (261 aa) initn: 120 init1: 72 opt: 226 Z-score: 290.6 bits: 61.6 E(85289): 1.9e-09 Smith-Waterman score: 227; 26.9% identity (57.4% similar) in 223 aa overlap (76-285:7-219) 50 60 70 80 90 100 pF1KE4 TDTRHLSGARAGVCPCCHPDGLLATMRDLLQYIACFFAFFSAGFLIVATWTDCWMVNA-- : .: ...... . :.:: : : .. NP_057 MSTTTCQVVAFLLSILGLAGCIAATGMDMWSTQDLY 10 20 30 110 120 130 140 150 160 pF1KE4 DDSLEVSTKCRGLWWECVTNAFDGIRTCDEYDSILAEHPLKLVVTRALMITADILAGFGF :. . . .::: :: .. .:. : : .::. : : ..:::::.. .:...:. NP_057 DNPVTSVFQYEGLWRSCVRQS-SGFTECRPYFTILGL-PAMLQAVRALMIVGIVLGAIGL 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE4 LTLLLGLDCVKFLPDEPYIKVRICFVAGATLLIAGTPGIIGSVWYAVDVYVERSTLVLHN :. ...: :... : :. . ...: ....: .: : .: .. : . : NP_057 LVSIFALKCIRIGSMEDSAKANMTLTSGIMFIVSGLCAIAGVSVFA-NMLVTNFWMSTAN 100 110 120 130 140 150 230 240 250 260 270 pF1KE4 IFLGI---------QYKFGWSCWLG-MAGSLGCFLAGAVLTCCLYLFKDVGPER-NYPYS .. :. .: :: . ..: .:: : : :.:. : . ..::. :: NP_057 MYTGMGGMVQTVQTRYTFGAALFVGWVAG--GLTLIGGVMMC--IACRGLAPEETNYKAV 160 170 180 190 200 280 290 300 pF1KE4 LRKAYSAAGVSMAKSYSAPRTETAKMYAVDTRV .: :.: :.: NP_057 ---SYHASGHSVAYKPGGFKASTGFGSNTKNKKIYDGGARTEDEVQSYPSKHDYV 210 220 230 240 250 260 305 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 23:28:38 2016 done: Sat Nov 5 23:28:39 2016 Total Scan time: 6.710 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]