FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3802, 74 aa 1>>>pF1KE3802 74 - 74 aa - 74 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9091+/-0.00023; mu= 9.4341+/- 0.015 mean_var=55.2879+/-10.657, 0's: 0 Z-trim(122.1): 3 B-trim: 21 in 1/56 Lambda= 0.172488 statistics sampled from 39725 (39728) to 39725 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.848), E-opt: 0.2 (0.466), width: 16 Scan time: 3.470 The best scores are: opt bits E(85289) NP_056206 (OMIM: 614484) anaphase-promoting comple ( 74) 509 133.4 3.2e-32 NP_001229303 (OMIM: 614484) anaphase-promoting com ( 74) 509 133.4 3.2e-32 NP_001229304 (OMIM: 614484) anaphase-promoting com ( 74) 509 133.4 3.2e-32 >>NP_056206 (OMIM: 614484) anaphase-promoting complex su (74 aa) initn: 509 init1: 509 opt: 509 Z-score: 699.4 bits: 133.4 E(85289): 3.2e-32 Smith-Waterman score: 509; 100.0% identity (100.0% similar) in 74 aa overlap (1-74:1-74) 10 20 30 40 50 60 pF1KE3 MDSEVQRDGRILDLIDDAWREDKLPYEDVAIPLNELPEPEQDNGGTTESVKEQEMKWTDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 MDSEVQRDGRILDLIDDAWREDKLPYEDVAIPLNELPEPEQDNGGTTESVKEQEMKWTDL 10 20 30 40 50 60 70 pF1KE3 ALQYLHENVPPIGN :::::::::::::: NP_056 ALQYLHENVPPIGN 70 >>NP_001229303 (OMIM: 614484) anaphase-promoting complex (74 aa) initn: 509 init1: 509 opt: 509 Z-score: 699.4 bits: 133.4 E(85289): 3.2e-32 Smith-Waterman score: 509; 100.0% identity (100.0% similar) in 74 aa overlap (1-74:1-74) 10 20 30 40 50 60 pF1KE3 MDSEVQRDGRILDLIDDAWREDKLPYEDVAIPLNELPEPEQDNGGTTESVKEQEMKWTDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MDSEVQRDGRILDLIDDAWREDKLPYEDVAIPLNELPEPEQDNGGTTESVKEQEMKWTDL 10 20 30 40 50 60 70 pF1KE3 ALQYLHENVPPIGN :::::::::::::: NP_001 ALQYLHENVPPIGN 70 >>NP_001229304 (OMIM: 614484) anaphase-promoting complex (74 aa) initn: 509 init1: 509 opt: 509 Z-score: 699.4 bits: 133.4 E(85289): 3.2e-32 Smith-Waterman score: 509; 100.0% identity (100.0% similar) in 74 aa overlap (1-74:1-74) 10 20 30 40 50 60 pF1KE3 MDSEVQRDGRILDLIDDAWREDKLPYEDVAIPLNELPEPEQDNGGTTESVKEQEMKWTDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MDSEVQRDGRILDLIDDAWREDKLPYEDVAIPLNELPEPEQDNGGTTESVKEQEMKWTDL 10 20 30 40 50 60 70 pF1KE3 ALQYLHENVPPIGN :::::::::::::: NP_001 ALQYLHENVPPIGN 70 74 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 06:40:58 2016 done: Sun Nov 6 06:40:59 2016 Total Scan time: 3.470 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]