Result of FASTA (ccds) for pFN21AE4358
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE4358, 375 aa
  1>>>pF1KE4358 375 - 375 aa - 375 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4447+/-0.000808; mu= 16.1179+/- 0.049
 mean_var=72.2356+/-15.176, 0's: 0 Z-trim(107.7): 28  B-trim: 532 in 1/49
 Lambda= 0.150903
 statistics sampled from 9716 (9737) to 9716 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.673), E-opt: 0.2 (0.299), width:  16
 Scan time:  2.440

The best scores are:                                      opt bits E(32554)
CCDS1430.1 ADIPOR1 gene_id:51094|Hs108|chr1        ( 375) 2581 571.0 5.7e-163
CCDS8511.1 ADIPOR2 gene_id:79602|Hs108|chr12       ( 386) 1832 408.0 7.2e-114
CCDS34020.1 PAQR3 gene_id:152559|Hs108|chr4        ( 311)  535 125.6   6e-29
CCDS267.1 PAQR7 gene_id:164091|Hs108|chr1          ( 346)  287 71.6 1.2e-12
CCDS4941.1 PAQR8 gene_id:85315|Hs108|chr6          ( 354)  281 70.3   3e-12
CCDS10232.1 PAQR5 gene_id:54852|Hs108|chr15        ( 330)  263 66.4 4.2e-11


>>CCDS1430.1 ADIPOR1 gene_id:51094|Hs108|chr1             (375 aa)
 initn: 2581 init1: 2581 opt: 2581  Z-score: 3039.3  bits: 571.0 E(32554): 5.7e-163
Smith-Waterman score: 2581; 100.0% identity (100.0% similar) in 375 aa overlap (1-375:1-375)

               10        20        30        40        50        60
pF1KE4 MSSHKGSVVAQGNGAPASNREADTVELAELGPLLEEKGKRVIANPPKAEEEQTCPVPQEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MSSHKGSVVAQGNGAPASNREADTVELAELGPLLEEKGKRVIANPPKAEEEQTCPVPQEE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 EEEVRVLTLPLQAHHAMEKMEEFVYKVWEGRWRVIPYDVLPDWLKDNDYLLHGHRPPMPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 EEEVRVLTLPLQAHHAMEKMEEFVYKVWEGRWRVIPYDVLPDWLKDNDYLLHGHRPPMPS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 FRACFKSIFRIHTETGNIWTHLLGFVLFLFLGILTMLRPNMYFMAPLQEKVVFGMFFLGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 FRACFKSIFRIHTETGNIWTHLLGFVLFLFLGILTMLRPNMYFMAPLQEKVVFGMFFLGA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 VLCLSFSWLFHTVYCHSEKVSRTFSKLDYSGIALLIMGSFVPWLYYSFYCSPQPRLIYLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VLCLSFSWLFHTVYCHSEKVSRTFSKLDYSGIALLIMGSFVPWLYYSFYCSPQPRLIYLS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE4 IVCVLGISAIIVAQWDRFATPKHRQTRAGVFLGLGLSGVVPTMHFTIAEGFVKATTVGQM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 IVCVLGISAIIVAQWDRFATPKHRQTRAGVFLGLGLSGVVPTMHFTIAEGFVKATTVGQM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE4 GWFFLMAVMYITGAGLYAARIPERFFPGKFDIWFQSHQIFHVLVVAAAFVHFYGVSNLQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GWFFLMAVMYITGAGLYAARIPERFFPGKFDIWFQSHQIFHVLVVAAAFVHFYGVSNLQE
              310       320       330       340       350       360

              370     
pF1KE4 FRYGLEGGCTDDTLL
       :::::::::::::::
CCDS14 FRYGLEGGCTDDTLL
              370     

>>CCDS8511.1 ADIPOR2 gene_id:79602|Hs108|chr12            (386 aa)
 initn: 1844 init1: 1806 opt: 1832  Z-score: 2157.8  bits: 408.0 E(32554): 7.2e-114
Smith-Waterman score: 1832; 70.7% identity (87.4% similar) in 365 aa overlap (11-375:23-386)

                           10        20        30        40        
pF1KE4             MSSHKGSVVAQGNGAPASNREADTVELAELGPLLEEKGKRVIANPPKA
                             .:.   .. :  .  . ..: :.:: .      .  . 
CCDS85 MNEPTENRLGCSRTPEPDIRLRKGHQLDGTRRGDNDSHQGDLEPILEASVLSSHHKKSSE
               10        20        30        40        50        60

       50        60        70        80        90       100        
pF1KE4 EEEQTCPVPQEEEEEVRVLTLPLQAHHAMEKMEEFVYKVWEGRWRVIPYDVLPDWLKDND
       :.: .  .:::.:  . .  : :::::::::::::: :::::::::::.:::::::::::
CCDS85 EHEYSDEAPQEDEGFMGMSPL-LQAHHAMEKMEEFVCKVWEGRWRVIPHDVLPDWLKDND
               70        80         90       100       110         

      110       120       130       140       150       160        
pF1KE4 YLLHGHRPPMPSFRACFKSIFRIHTETGNIWTHLLGFVLFLFLGILTMLRPNMYFMAPLQ
       .::::::::::::::::::::::::::::::::::: :.:: :::. :.:::. :.::::
CCDS85 FLLHGHRPPMPSFRACFKSIFRIHTETGNIWTHLLGCVFFLCLGIFYMFRPNISFVAPLQ
     120       130       140       150       160       170         

      170       180       190       200       210       220        
pF1KE4 EKVVFGMFFLGAVLCLSFSWLFHTVYCHSEKVSRTFSKLDYSGIALLIMGSFVPWLYYSF
       ::::::.:::::.::::::::::::::::: ::: :::::::::::::::::::::::::
CCDS85 EKVVFGLFFLGAILCLSFSWLFHTVYCHSEGVSRLFSKLDYSGIALLIMGSFVPWLYYSF
     180       190       200       210       220       230         

      230       240       250       260       270       280        
pF1KE4 YCSPQPRLIYLSIVCVLGISAIIVAQWDRFATPKHRQTRAGVFLGLGLSGVVPTMHFTIA
       ::.::: .::: ..:::::.::::.::: ::::..: .::::::::::::..::.:..:.
CCDS85 YCNPQPCFIYLIVICVLGIAAIIVSQWDMFATPQYRGVRAGVFLGLGLSGIIPTLHYVIS
     240       250       260       270       280       290         

      290       300       310       320       330       340        
pF1KE4 EGFVKATTVGQMGWFFLMAVMYITGAGLYAARIPERFFPGKFDIWFQSHQIFHVLVVAAA
       :::.::.:.::.::..::: .:::::.:::::::::::::: ::::.:::.::..:::.:
CCDS85 EGFLKAATIGQIGWLMLMASLYITGAALYAARIPERFFPGKCDIWFHSHQLFHIFVVAGA
     300       310       320       330       340       350         

      350       360       370     
pF1KE4 FVHFYGVSNLQEFRYGLEGGCTDDTLL
       ::::.:::::::::. . :::...  :
CCDS85 FVHFHGVSNLQEFRFMIGGGCSEEDAL
     360       370       380      

>>CCDS34020.1 PAQR3 gene_id:152559|Hs108|chr4             (311 aa)
 initn: 499 init1: 186 opt: 535  Z-score: 633.2  bits: 125.6 E(32554): 6e-29
Smith-Waterman score: 535; 34.0% identity (62.1% similar) in 282 aa overlap (93-371:29-306)

             70        80        90       100       110       120  
pF1KE4 EVRVLTLPLQAHHAMEKMEEFVYKVWEGRWRVIPYDVLPDWLKDNDYLLHGHRPPMPSFR
                                     :.  :. .:  :::: :.  :.:  .:: :
CCDS34   MHQKLLKSAHYIELGSYQYWPVLVPRGIRLYTYEQIPGSLKDNPYITDGYRAYLPS-R
                 10        20        30        40        50        

            130       140       150       160       170       180  
pF1KE4 ACFKSIFRIHTETGNIWTHLLGFVLFLFLGILTMLRPNMYFMAPLQEKVVFGMFFLGAVL
        :.::.: . .:: :::.::::: ::. :::  :        :  .. :. .. ..   .
CCDS34 LCIKSLFILSNETVNIWSHLLGFFLFFTLGIYDMTSVLPSASASREDFVICSICLFCFQV
        60        70        80        90       100       110       

            190        200       210       220       230       240 
pF1KE4 CLSFSWLFHTVYCH-SEKVSRTFSKLDYSGIALLIMGSFVPWLYYSFYCSPQPRLIYLSI
       :.  :  .:   :: :::. : .  :::.::.. :.: .:  ..:.:::.   : .::  
CCDS34 CMLCSVGYHLFSCHRSEKTCRRWMALDYAGISIGILGCYVSGVFYAFYCNNYWRQVYLIT
       120       130       140       150       160       170       

             250        260       270       280       290       300
pF1KE4 VCVLGISAIIVAQWD-RFATPKHRQTRAGVFLGLGLSGVVPTMHFTIAEGFVKATTVGQM
       : .. : :.. ::    . : . .. :. .: ...  ::.::.:..  .: . :  : ..
CCDS34 VLAM-ILAVFFAQIHPNYLTQQWQRLRSIIFCSVSGYGVIPTLHWVWLNGGIGAPIVQDF
       180        190       200       210       220       230      

              310        320       330       340       350         
pF1KE4 GWFFLMAVMYITGAGL-YAARIPERFFPGKFDIWFQSHQIFHVLVVAAAFVHFYGVSNLQ
       .   ..  :    : : : ...:::.:::...   .::::.:.:.:.  .....  :.. 
CCDS34 APRVIVMYMIALLAFLFYISKVPERYFPGQLNYLGSSHQIWHILAVV--MLYWWHQSTVY
        240       250       260       270       280         290    

     360       370      
pF1KE4 EFRYGLEGGCTDDTLL 
        ..:     : :     
CCDS34 VMQYRHSKPCPDYVSHL
          300       310 

>>CCDS267.1 PAQR7 gene_id:164091|Hs108|chr1               (346 aa)
 initn: 298 init1: 107 opt: 287  Z-score: 340.7  bits: 71.6 E(32554): 1.2e-12
Smith-Waterman score: 287; 25.0% identity (60.4% similar) in 260 aa overlap (109-362:46-300)

       80        90       100       110       120       130        
pF1KE4 KMEEFVYKVWEGRWRVIPYDVLPDWLKDNDYLLHGHRPPMPSFRACFKSIFRIHTETGNI
                                     :.  :.::   ..:  :...:. :.:. :.
CCDS26 QVIQEPQLSLQPEPVFTVDRAEVPPLFWKPYIYAGYRPLHQTWRFYFRTLFQQHNEAVNV
          20        30        40        50        60        70     

      140       150       160       170       180       190        
pF1KE4 WTHLLGFVLFLFLGILTMLRPNMYFMAPLQEKVVFGMFFLGAVLCLSFSWLFHTVYCHSE
       :::::. ...:.   :...  .. : .  .   .: .. :..   :::: : : .  .::
CCDS26 WTHLLAALVLLLR--LALFVETVDFWGDPHALPLF-IIVLASFTYLSFSALAHLLQAKSE
          80          90       100        110       120       130  

      200       210       220       230         240       250      
pF1KE4 KVSRTFSKLDYSGIALLIMGSFVPWLYYSFYCS--PQPRLIYLSIVCVLGISAIIVAQWD
           .:  ::: :.:.  .:: .  .::..  .   : . ..: ..  :.  . : . ..
CCDS26 FWHYSFFFLDYVGVAVYQFGSALAHFYYAIEPAWHAQVQAVFLPMAAFLAWLSCIGSCYN
            140       150       160       170       180       190  

        260           270       280       290       300       310  
pF1KE4 RFATPKHRQTRA----GVFLGLGLSGVVPTMHFTIAEGFVKATTVGQMGWFFLMAVMYIT
       ..        :.       :. .:. . :..:  .. .   .:    . .   ..:... 
CCDS26 KYIQKPGLLGRTCQEVPSVLAYALD-ISPVVHRIFVSS-DPTTDDPALLYHKCQVVFFLL
            200       210        220        230       240       250

            320       330       340       350       360       370  
pF1KE4 GAGLYAARIPERFFPGKFDIWFQSHQIFHVLVVAAAFVHFYGVSNLQEFRYGLEGGCTDD
       .:..... .:::.:::.  .. :.::.::...:  ..... .:.   : :          
CCDS26 AAAFFSTFMPERWFPGSCHVFGQGHQLFHIFLVLCTLAQLEAVALDYEARRPIYEPLHTH
              260       270       280       290       300       310

                                           
pF1KE4 TLL                                 
                                           
CCDS26 WPHNFSGLFLLTVGSSILTAFLLSQLVQRKLDQKTK
              320       330       340      

>>CCDS4941.1 PAQR8 gene_id:85315|Hs108|chr6               (354 aa)
 initn: 267 init1: 103 opt: 281  Z-score: 333.5  bits: 70.3 E(32554): 3e-12
Smith-Waterman score: 281; 26.7% identity (57.8% similar) in 258 aa overlap (95-344:37-289)

           70        80        90       100       110       120    
pF1KE4 RVLTLPLQAHHAMEKMEEFVYKVWEGRWRVIPYDVLPDWLKDNDYLLHGHRPPMPSFRAC
                                     .:   .:. ...  :.  :.::    .:  
CCDS49 ERLSTLSVSGQQLRRLPKILEDGLPKMPCTVPETDVPQLFRE-PYIRTGYRPTGHEWRYY
         10        20        30        40         50        60     

          130       140       150       160       170       180    
pF1KE4 FKSIFRIHTETGNIWTHLLGFVLFLFLGILTMLRPNMYFMAPLQEKVVFGMFFLGAVLCL
       : :.:. :.:. :.:::::. .: ..: . .. . .    :  . .. . .:.:...  :
CCDS49 FFSLFQKHNEVVNVWTHLLA-ALAVLLRFWAFAEAEALPWASTH-SLPLLLFILSSITYL
          70        80         90       100        110       120   

          190       200       210       220       230           240
pF1KE4 SFSWLFHTVYCHSEKVSRTFSKLDYSGIALLIMGSFVPWLYYSFYCSPQPR--LIYL--S
       . : : : .  .::    ::  .:: :...  .:: .  ..::   .   :  :..:  .
CCDS49 TCSLLAHLLQSKSELSHYTFYFVDYVGVSVYQYGSALAHFFYSSDQAWYDRFWLFFLPAA
           130       140       150       160       170       180   

               250        260       270        280       290       
pF1KE4 IVC-VLGISAIIVAQWD-RFATPKHRQTRAGVFLGLG-LSGVVPTMHFTIAEGFVKATTV
         :  :. ..   :..  :   :  :.    :  ::. .  . :. :  .:   . :   
CCDS49 AFCGWLSCAGCCYAKYRYRRPYPVMRKICQVVPAGLAFILDISPVAH-RVALCHL-AGCQ
           190       200       210       220       230         240 

       300       310        320       330       340       350      
pF1KE4 GQMGWFFLMAVMY-ITGAGLYAARIPERFFPGKFDIWFQSHQIFHVLVVAAAFVHFYGVS
        : .:.  . ... ...: ...  .::..:::. ::  ..:::::...            
CCDS49 EQAAWYHTLQILFFLVSAYFFSCPVPEKYFPGSCDIVGHGHQIFHAFLSICTLSQLEAIL
             250       260       270       280       290       300 

        360       370                                       
pF1KE4 NLQEFRYGLEGGCTDDTLL                                  
                                                            
CCDS49 LDYQGRQEIFLQRHGPLSVHMACLSFFFLAACSAATAALLRHKVKARLTKKDS
             310       320       330       340       350    

>>CCDS10232.1 PAQR5 gene_id:54852|Hs108|chr15             (330 aa)
 initn: 288 init1: 133 opt: 263  Z-score: 312.7  bits: 66.4 E(32554): 4.2e-11
Smith-Waterman score: 263; 25.2% identity (55.8% similar) in 278 aa overlap (93-355:8-272)

             70        80        90       100       110       120  
pF1KE4 EVRVLTLPLQAHHAMEKMEEFVYKVWEGRWRVIPYDVLPDWLKDNDYLLHGHRPPMPSFR
                                     :..  : .:. ....  .: :.: :. :  
CCDS10                        MLSLKLPRLFSIDQIPQVFHEQG-ILFGYRHPQSSAT
                                      10        20         30      

            130       140       150       160        170       180 
pF1KE4 ACFKSIFRIHTETGNIWTHLLGFVLFLFLGILTMLRPNMYFMAPLQ-EKVVFGMFFLGAV
       ::. :.:.. .:: ::::::: : .: .  . ..      .:. .. ..  . :.    .
CCDS10 ACILSLFQMTNETLNIWTHLLPFWFFAWRFVTAL------YMTDIKNDSYSWPMLVYMCT
         40        50        60        70              80        90

               190       200       210       220           230     
pF1KE4 LCLS--FSWLFHTVYCHSEKVSRTFSKLDYSGIALLIMGSFVPWLYYSF----YCSPQPR
        :.    :   ::    :... .    :::... :. .:: . .  :.:    .:.    
CCDS10 SCVYPLVSSCAHTFSSMSKNARHICYFLDYGAVNLFSLGSAIAYSAYTFPDALMCTTFHD
              100       110       120       130       140       150

         240       250        260       270          280           
pF1KE4 LIYLSIVCVLGISAIIVAQWDRF-ATPKHRQTRAGVFLGLGLSGV---VPTMH----FTI
         :.... .  : .  .. ..::    : :  ..   :...   .   .: ..    :  
CCDS10 Y-YVALAVLNTILSTGLSCYSRFLEIQKPRLCKVIRVLAFAYPYTWDSLPIFYRLFLFPG
               160       170       180       190       200         

       290       300       310       320       330       340       
pF1KE4 AEGFVKATTVGQMGWFFLMAVMYITGAGLYAARIPERFFPGKFDIWFQSHQIFHVLVVAA
         .  .::.  :        .: . .. ::.:..:::. ::.::   .:::.::: :. :
CCDS10 ESAQNEATSYHQK-----HMIMTLLASFLYSAHLPERLAPGRFDYIGHSHQLFHVCVILA
     210       220            230       240       250       260    

       350       360       370                                     
pF1KE4 AFVHFYGVSNLQEFRYGLEGGCTDDTLL                                
       . ... ..                                                    
CCDS10 THMQMEAILLDKTLRKEWLLATSKPFSFSQIAGAILLCIIFSLSNIIYFSAALYRIPKPE
          270       280       290       300       310       320    




375 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 02:05:14 2016 done: Sun Nov  6 02:05:14 2016
 Total Scan time:  2.440 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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