FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2185, 282 aa 1>>>pF1KE2185 282 - 282 aa - 282 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.9238+/-0.000517; mu= 12.3238+/- 0.032 mean_var=114.7386+/-22.763, 0's: 0 Z-trim(109.3): 209 B-trim: 301 in 1/57 Lambda= 0.119735 statistics sampled from 17245 (17490) to 17245 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.554), E-opt: 0.2 (0.205), width: 16 Scan time: 6.760 The best scores are: opt bits E(85289) NP_078902 (OMIM: 608162) V-set domain-containing T ( 282) 1808 323.8 2.3e-88 XP_011540445 (OMIM: 608162) PREDICTED: V-set domai ( 332) 1738 311.8 1.1e-84 XP_016857824 (OMIM: 608162) PREDICTED: V-set domai ( 287) 1733 310.9 1.8e-84 NP_001240778 (OMIM: 608162) V-set domain-containin ( 187) 1206 219.6 3.4e-57 NP_001240779 (OMIM: 608162) V-set domain-containin ( 166) 870 161.6 9.3e-40 NP_001316557 (OMIM: 605715) CD276 antigen isoform ( 316) 335 69.4 9.7e-12 NP_079516 (OMIM: 605715) CD276 antigen isoform b p ( 316) 335 69.4 9.7e-12 NP_001316558 (OMIM: 605715) CD276 antigen isoform ( 388) 325 67.8 3.7e-11 XP_011520398 (OMIM: 605715) PREDICTED: CD276 antig ( 534) 325 67.9 4.7e-11 XP_016878127 (OMIM: 605715) PREDICTED: CD276 antig ( 534) 325 67.9 4.7e-11 XP_011520397 (OMIM: 605715) PREDICTED: CD276 antig ( 534) 325 67.9 4.7e-11 NP_001019907 (OMIM: 605715) CD276 antigen isoform ( 534) 325 67.9 4.7e-11 XP_005254757 (OMIM: 605715) PREDICTED: CD276 antig ( 534) 325 67.9 4.7e-11 NP_932079 (OMIM: 606192) butyrophilin-like protein ( 466) 308 64.9 3.2e-10 XP_016865705 (OMIM: 613594) PREDICTED: butyrophili ( 225) 299 63.1 5.7e-10 XP_005248889 (OMIM: 613594) PREDICTED: butyrophili ( 267) 299 63.1 6.4e-10 XP_005248888 (OMIM: 613594) PREDICTED: butyrophili ( 267) 299 63.1 6.4e-10 XP_011510669 (OMIM: 604371) PREDICTED: HERV-H LTR- ( 379) 298 63.1 9.2e-10 NP_001269487 (OMIM: 604371) HERV-H LTR-associating ( 397) 298 63.1 9.6e-10 XP_016861131 (OMIM: 604371) PREDICTED: HERV-H LTR- ( 414) 298 63.1 9.8e-10 XP_005247137 (OMIM: 604371) PREDICTED: HERV-H LTR- ( 414) 298 63.1 9.8e-10 NP_009003 (OMIM: 604371) HERV-H LTR-associating pr ( 414) 298 63.1 9.8e-10 NP_001269485 (OMIM: 604371) HERV-H LTR-associating ( 414) 298 63.1 9.8e-10 NP_001269486 (OMIM: 604371) HERV-H LTR-associating ( 414) 298 63.1 9.8e-10 XP_011510665 (OMIM: 604371) PREDICTED: HERV-H LTR- ( 425) 298 63.1 1e-09 XP_011510664 (OMIM: 604371) PREDICTED: HERV-H LTR- ( 425) 298 63.1 1e-09 XP_011510666 (OMIM: 604371) PREDICTED: HERV-H LTR- ( 425) 298 63.1 1e-09 NP_919423 (OMIM: 613593) butyrophilin subfamily 3 ( 352) 290 61.7 2.3e-09 XP_005248891 (OMIM: 613593) PREDICTED: butyrophili ( 352) 290 61.7 2.3e-09 NP_001138481 (OMIM: 613593) butyrophilin subfamily ( 378) 290 61.7 2.4e-09 XP_005248890 (OMIM: 613593) PREDICTED: butyrophili ( 506) 290 61.8 3e-09 NP_008979 (OMIM: 613593) butyrophilin subfamily 3 ( 513) 290 61.8 3e-09 NP_001153180 (OMIM: 615606) butyrophilin-like prot ( 340) 285 60.8 4.1e-09 NP_079126 (OMIM: 615606) butyrophilin-like protein ( 347) 285 60.8 4.1e-09 NP_001723 (OMIM: 601610) butyrophilin subfamily 1 ( 526) 287 61.3 4.4e-09 XP_005249397 (OMIM: 601610) PREDICTED: butyrophili ( 626) 287 61.4 4.9e-09 XP_011532951 (OMIM: 615606) PREDICTED: butyrophili ( 462) 285 60.9 5e-09 NP_001035552 (OMIM: 615606) butyrophilin-like prot ( 500) 285 61.0 5.3e-09 XP_016865703 (OMIM: 613594) PREDICTED: butyrophili ( 292) 281 60.1 5.9e-09 NP_001184178 (OMIM: 613594) butyrophilin subfamily ( 292) 281 60.1 5.9e-09 XP_016865702 (OMIM: 613594) PREDICTED: butyrophili ( 297) 281 60.1 6e-09 XP_011512571 (OMIM: 613594) PREDICTED: butyrophili ( 297) 281 60.1 6e-09 XP_006715045 (OMIM: 613594) PREDICTED: butyrophili ( 297) 281 60.1 6e-09 NP_001184177 (OMIM: 613594) butyrophilin subfamily ( 311) 281 60.1 6.2e-09 NP_001184175 (OMIM: 613594) butyrophilin subfamily ( 334) 281 60.1 6.5e-09 XP_005248884 (OMIM: 613594) PREDICTED: butyrophili ( 334) 281 60.1 6.5e-09 NP_008978 (OMIM: 613594) butyrophilin subfamily 3 ( 334) 281 60.1 6.5e-09 XP_016865700 (OMIM: 613594) PREDICTED: butyrophili ( 334) 281 60.1 6.5e-09 XP_016865701 (OMIM: 613594) PREDICTED: butyrophili ( 334) 281 60.1 6.5e-09 NP_001184176 (OMIM: 613594) butyrophilin subfamily ( 334) 281 60.1 6.5e-09 >>NP_078902 (OMIM: 608162) V-set domain-containing T-cel (282 aa) initn: 1808 init1: 1808 opt: 1808 Z-score: 1707.5 bits: 323.8 E(85289): 2.3e-88 Smith-Waterman score: 1808; 100.0% identity (100.0% similar) in 282 aa overlap (1-282:1-282) 10 20 30 40 50 60 pF1KE2 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTFEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_078 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTFEP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 DIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_078 DIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 QLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFPQPTVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_078 QLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFPQPTVV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 WASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKATGDIKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_078 WASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKATGDIKV 190 200 210 220 230 240 250 260 270 280 pF1KE2 TESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK :::::::::::::::::::::::::::::::::::::::::: NP_078 TESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK 250 260 270 280 >>XP_011540445 (OMIM: 608162) PREDICTED: V-set domain-co (332 aa) initn: 1738 init1: 1738 opt: 1738 Z-score: 1641.3 bits: 311.8 E(85289): 1.1e-84 Smith-Waterman score: 1738; 100.0% identity (100.0% similar) in 272 aa overlap (11-282:61-332) 10 20 30 40 pF1KE2 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVT :::::::::::::::::::::::::::::: XP_011 FSTMGSVMLLKESCGNVFFSAVRIRRSRKHSIISIIIILAGAIALIIGFGISGRHSITVT 40 50 60 70 80 90 50 60 70 80 90 100 pF1KE2 TVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGR 100 110 120 130 140 150 110 120 130 140 150 160 pF1KE2 TAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYN 160 170 180 190 200 210 170 180 190 200 210 220 pF1KE2 ASSETLRCEAPRWFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ASSETLRCEAPRWFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTIN 220 230 240 250 260 270 230 240 250 260 270 280 pF1KE2 NTYSCMIENDIAKATGDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NTYSCMIENDIAKATGDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLM 280 290 300 310 320 330 pF1KE2 LK :: XP_011 LK >>XP_016857824 (OMIM: 608162) PREDICTED: V-set domain-co (287 aa) initn: 1733 init1: 1733 opt: 1733 Z-score: 1637.4 bits: 310.9 E(85289): 1.8e-84 Smith-Waterman score: 1733; 100.0% identity (100.0% similar) in 271 aa overlap (12-282:17-287) 10 20 30 40 50 pF1KE2 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILS :::::::::::::::::::::::::::::::::::::::::::: XP_016 MECLFPLAKKRDTPHRIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILS 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE2 CTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASL 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE2 RLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFP 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE2 QPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKAT 190 200 210 220 230 240 240 250 260 270 280 pF1KE2 GDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK ::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK 250 260 270 280 >>NP_001240778 (OMIM: 608162) V-set domain-containing T- (187 aa) initn: 1206 init1: 1206 opt: 1206 Z-score: 1147.8 bits: 219.6 E(85289): 3.4e-57 Smith-Waterman score: 1206; 100.0% identity (100.0% similar) in 187 aa overlap (96-282:1-187) 70 80 90 100 110 120 pF1KE2 DIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDA :::::::::::::::::::::::::::::: NP_001 MFRGRTAVFADQVIVGNASLRLKNVQLTDA 10 20 30 130 140 150 160 170 180 pF1KE2 GTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFPQPTVVWASQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFPQPTVVWASQV 40 50 60 70 80 90 190 200 210 220 230 240 pF1KE2 DQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKATGDIKVTESEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKATGDIKVTESEI 100 110 120 130 140 150 250 260 270 280 pF1KE2 KRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK ::::::::::::::::::::::::::::::::::::: NP_001 KRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK 160 170 180 >>NP_001240779 (OMIM: 608162) V-set domain-containing T- (166 aa) initn: 870 init1: 870 opt: 870 Z-score: 834.8 bits: 161.6 E(85289): 9.3e-40 Smith-Waterman score: 870; 90.7% identity (92.7% similar) in 151 aa overlap (132-282:16-166) 110 120 130 140 150 160 pF1KE2 AVFADQVIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNA :: : . . .::::::::::::: NP_001 MASLGQILFWSIISIIIILAGAIALIIGFGISAFSMPEVNVDYNA 10 20 30 40 170 180 190 200 210 220 pF1KE2 SSETLRCEAPRWFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SSETLRCEAPRWFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINN 50 60 70 80 90 100 230 240 250 260 270 280 pF1KE2 TYSCMIENDIAKATGDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TYSCMIENDIAKATGDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLML 110 120 130 140 150 160 pF1KE2 K : NP_001 K >>NP_001316557 (OMIM: 605715) CD276 antigen isoform b pr (316 aa) initn: 224 init1: 119 opt: 335 Z-score: 331.8 bits: 69.4 E(85289): 9.7e-12 Smith-Waterman score: 335; 29.8% identity (58.7% similar) in 235 aa overlap (18-241:12-238) 10 20 30 40 50 pF1KE2 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTF-- . .:: . : ..: . : .. .: :. : :.: NP_001 MLRRRGSPGMGVHVGAALGALWFCLTGALEVQVPEDPVVALVGTDATLCCSFSP 10 20 30 40 50 60 70 80 90 100 110 pF1KE2 EPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLK :: ..:... . : . ::: : ::.: : . .:::.: : . :::::::. NP_001 EPGFSLAQLNLIWQLTDTKQLVHSFAEGQD----QGSAYANRTALFPDLLAQGNASLRLQ 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE2 NVQLTDAGTYKCYIITSKGKGNANLEYKTGA-FSMPEVNVDYN-----ASSETLRCEAPR :...: :.. :.. . . :.: . ...: .: : .... : ... :. : . : NP_001 RVRVADEGSFTCFV-SIRDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCSSYR 120 130 140 150 160 180 190 200 210 220 230 pF1KE2 WFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVT-INNTYSCMIENDI .:. : : : ::. .. .:: .. .:. . : ::: : :.::::...: . NP_001 GYPEAEVFW--QDGQGVPLTGNVTTS-QMANEQGLFDVHSVLRVVLGANGTYSCLVRNPV 170 180 190 200 210 220 240 250 260 270 280 pF1KE2 AK--ATGDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK . : :.. .: NP_001 LQQDAHGSVTITGQPMTFPPEALWVTVGLSVCLIALLVALAFVCWRKIKQSCEEENAGAE 230 240 250 260 270 280 >>NP_079516 (OMIM: 605715) CD276 antigen isoform b precu (316 aa) initn: 224 init1: 119 opt: 335 Z-score: 331.8 bits: 69.4 E(85289): 9.7e-12 Smith-Waterman score: 335; 29.8% identity (58.7% similar) in 235 aa overlap (18-241:12-238) 10 20 30 40 50 pF1KE2 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTF-- . .:: . : ..: . : .. .: :. : :.: NP_079 MLRRRGSPGMGVHVGAALGALWFCLTGALEVQVPEDPVVALVGTDATLCCSFSP 10 20 30 40 50 60 70 80 90 100 110 pF1KE2 EPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLK :: ..:... . : . ::: : ::.: : . .:::.: : . :::::::. NP_079 EPGFSLAQLNLIWQLTDTKQLVHSFAEGQD----QGSAYANRTALFPDLLAQGNASLRLQ 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE2 NVQLTDAGTYKCYIITSKGKGNANLEYKTGA-FSMPEVNVDYN-----ASSETLRCEAPR :...: :.. :.. . . :.: . ...: .: : .... : ... :. : . : NP_079 RVRVADEGSFTCFV-SIRDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCSSYR 120 130 140 150 160 180 190 200 210 220 230 pF1KE2 WFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVT-INNTYSCMIENDI .:. : : : ::. .. .:: .. .:. . : ::: : :.::::...: . NP_079 GYPEAEVFW--QDGQGVPLTGNVTTS-QMANEQGLFDVHSVLRVVLGANGTYSCLVRNPV 170 180 190 200 210 220 240 250 260 270 280 pF1KE2 AK--ATGDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK . : :.. .: NP_079 LQQDAHGSVTITGQPMTFPPEALWVTVGLSVCLIALLVALAFVCWRKIKQSCEEENAGAE 230 240 250 260 270 280 >>NP_001316558 (OMIM: 605715) CD276 antigen isoform c [H (388 aa) initn: 225 init1: 119 opt: 325 Z-score: 321.3 bits: 67.8 E(85289): 3.7e-11 Smith-Waterman score: 325; 31.7% identity (61.0% similar) in 205 aa overlap (48-241:114-310) 20 30 40 50 60 70 pF1KE2 ILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTF--EPDIKLSDIVIQWLKEG .: :. : :.: :: ..:... . : NP_001 DAHSSVTITPQRSPTGAVEVQVPEDPVVALVGTDATLRCSFSPEPGFSLAQLNLIWQLTD 90 100 110 120 130 140 80 90 100 110 120 130 pF1KE2 VLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITS . ::: : ::.: : . .:::.: : . :::::::. :...: :.. :.. . NP_001 TKQLVHSFTEGRD----QGSAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFV-SI 150 160 170 180 190 140 150 160 170 180 pF1KE2 KGKGNANLEYKTGA-FSMPEVNVDYN-----ASSETLRCEAPRWFPQPTVVWASQVDQGA . :.: . ...: .: : .... : ... :. : . : .:. : : : ::. NP_001 RDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCSSYRGYPEAEVFW--QDGQGV 200 210 220 230 240 250 190 200 210 220 230 240 pF1KE2 NFSEVSNTSFELNSENVTMKVVSVLYNVT-INNTYSCMIENDIAK--ATGDIKVTESEIK .. .:: .. .:. . : ::: : :.::::...: . . : :.. .: NP_001 PLTGNVTTS-QMANEQGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPMT 260 270 280 290 300 310 250 260 270 280 pF1KE2 RRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK NP_001 FPPEALWVTVGLSVCLIALLVALAFVCWRKIKQSCEEENAGAEDQDGEGEGSKTALQPLK 320 330 340 350 360 370 >>XP_011520398 (OMIM: 605715) PREDICTED: CD276 antigen i (534 aa) initn: 329 init1: 119 opt: 325 Z-score: 319.5 bits: 67.9 E(85289): 4.7e-11 Smith-Waterman score: 325; 31.7% identity (61.0% similar) in 205 aa overlap (48-241:260-456) 20 30 40 50 60 70 pF1KE2 ILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTF--EPDIKLSDIVIQWLKEG .: :. : :.: :: ..:... . : XP_011 DAHSSVTITPQRSPTGAVEVQVPEDPVVALVGTDATLRCSFSPEPGFSLAQLNLIWQLTD 230 240 250 260 270 280 80 90 100 110 120 130 pF1KE2 VLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITS . ::: : ::.: : . .:::.: : . :::::::. :...: :.. :.. . XP_011 TKQLVHSFTEGRD----QGSAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFV-SI 290 300 310 320 330 340 140 150 160 170 180 pF1KE2 KGKGNANLEYKTGA-FSMPEVNVDYN-----ASSETLRCEAPRWFPQPTVVWASQVDQGA . :.: . ...: .: : .... : ... :. : . : .:. : : : ::. XP_011 RDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCSSYRGYPEAEVFW--QDGQGV 350 360 370 380 390 400 190 200 210 220 230 240 pF1KE2 NFSEVSNTSFELNSENVTMKVVSVLYNVT-INNTYSCMIENDIAK--ATGDIKVTESEIK .. .:: .. .:. . : ::: : :.::::...: . . : :.. .: XP_011 PLTGNVTTS-QMANEQGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPMT 410 420 430 440 450 460 250 260 270 280 pF1KE2 RRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK XP_011 FPPEALWVTVGLSVCLIALLVALAFVCWRKIKQSCEEENAGAEDQDGEGEGSKTALQPLK 470 480 490 500 510 520 >-- initn: 239 init1: 119 opt: 323 Z-score: 317.7 bits: 67.6 E(85289): 5.9e-11 Smith-Waterman score: 323; 28.8% identity (58.4% similar) in 233 aa overlap (18-241:12-236) 10 20 30 40 50 pF1KE2 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTF-- . .:: . : ..: . : .. .: :. : :.: XP_011 MLRRRGSPGMGVHVGAALGALWFCLTGALEVQVPEDPVVALVGTDATLCCSFSP 10 20 30 40 50 60 70 80 90 100 110 pF1KE2 EPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLK :: ..:... . : . ::: : ::.: : . .:::.: : . :::::::. XP_011 EPGFSLAQLNLIWQLTDTKQLVHSFAEGQD----QGSAYANRTALFPDLLAQGNASLRLQ 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE2 NVQLTDAGTYKCYIITSKGKGNANLEYKTGA-FSMPEVNVDYN-----ASSETLRCEAPR :...: :.. :.. . . :.: . ...: .: : .... : ... :. : . . XP_011 RVRVADEGSFTCFV-SIRDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCSSYQ 120 130 140 150 160 180 190 200 210 220 230 pF1KE2 WFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVT-INNTYSCMIENDI .:. : : : ::. .. .:: .. .:. . : :.: : :.::::...: . XP_011 GYPEAEVFW--QDGQGVPLTGNVTTS-QMANEQGLFDVHSILRVVLGANGTYSCLVRNPV 170 180 190 200 210 220 240 250 260 270 280 pF1KE2 AKATGDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK . . .:: XP_011 LQQDAHSSVTITPQRSPTGAVEVQVPEDPVVALVGTDATLRCSFSPEPGFSLAQLNLIWQ 230 240 250 260 270 280 >>XP_016878127 (OMIM: 605715) PREDICTED: CD276 antigen i (534 aa) initn: 329 init1: 119 opt: 325 Z-score: 319.5 bits: 67.9 E(85289): 4.7e-11 Smith-Waterman score: 325; 31.7% identity (61.0% similar) in 205 aa overlap (48-241:260-456) 20 30 40 50 60 70 pF1KE2 ILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTF--EPDIKLSDIVIQWLKEG .: :. : :.: :: ..:... . : XP_016 DAHSSVTITPQRSPTGAVEVQVPEDPVVALVGTDATLRCSFSPEPGFSLAQLNLIWQLTD 230 240 250 260 270 280 80 90 100 110 120 130 pF1KE2 VLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITS . ::: : ::.: : . .:::.: : . :::::::. :...: :.. :.. . XP_016 TKQLVHSFTEGRD----QGSAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFV-SI 290 300 310 320 330 340 140 150 160 170 180 pF1KE2 KGKGNANLEYKTGA-FSMPEVNVDYN-----ASSETLRCEAPRWFPQPTVVWASQVDQGA . :.: . ...: .: : .... : ... :. : . : .:. : : : ::. XP_016 RDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCSSYRGYPEAEVFW--QDGQGV 350 360 370 380 390 400 190 200 210 220 230 240 pF1KE2 NFSEVSNTSFELNSENVTMKVVSVLYNVT-INNTYSCMIENDIAK--ATGDIKVTESEIK .. .:: .. .:. . : ::: : :.::::...: . . : :.. .: XP_016 PLTGNVTTS-QMANEQGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPMT 410 420 430 440 450 460 250 260 270 280 pF1KE2 RRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK XP_016 FPPEALWVTVGLSVCLIALLVALAFVCWRKIKQSCEEENAGAEDQDGEGEGSKTALQPLK 470 480 490 500 510 520 >-- initn: 239 init1: 119 opt: 323 Z-score: 317.7 bits: 67.6 E(85289): 5.9e-11 Smith-Waterman score: 323; 28.8% identity (58.4% similar) in 233 aa overlap (18-241:12-236) 10 20 30 40 50 pF1KE2 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTF-- . .:: . : ..: . : .. .: :. : :.: XP_016 MLRRRGSPGMGVHVGAALGALWFCLTGALEVQVPEDPVVALVGTDATLCCSFSP 10 20 30 40 50 60 70 80 90 100 110 pF1KE2 EPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLK :: ..:... . : . ::: : ::.: : . .:::.: : . :::::::. XP_016 EPGFSLAQLNLIWQLTDTKQLVHSFAEGQD----QGSAYANRTALFPDLLAQGNASLRLQ 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE2 NVQLTDAGTYKCYIITSKGKGNANLEYKTGA-FSMPEVNVDYN-----ASSETLRCEAPR :...: :.. :.. . . :.: . ...: .: : .... : ... :. : . . XP_016 RVRVADEGSFTCFV-SIRDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCSSYQ 120 130 140 150 160 180 190 200 210 220 230 pF1KE2 WFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVT-INNTYSCMIENDI .:. : : : ::. .. .:: .. .:. . : :.: : :.::::...: . XP_016 GYPEAEVFW--QDGQGVPLTGNVTTS-QMANEQGLFDVHSILRVVLGANGTYSCLVRNPV 170 180 190 200 210 220 240 250 260 270 280 pF1KE2 AKATGDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK . . .:: XP_016 LQQDAHSSVTITPQRSPTGAVEVQVPEDPVVALVGTDATLRCSFSPEPGFSLAQLNLIWQ 230 240 250 260 270 280 282 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 18:57:54 2016 done: Sun Nov 6 18:57:55 2016 Total Scan time: 6.760 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]