FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2185, 282 aa 1>>>pF1KE2185 282 - 282 aa - 282 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3036+/-0.0012; mu= 9.8702+/- 0.072 mean_var=102.1840+/-20.796, 0's: 0 Z-trim(102.3): 100 B-trim: 5 in 2/51 Lambda= 0.126877 statistics sampled from 6799 (6901) to 6799 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.569), E-opt: 0.2 (0.212), width: 16 Scan time: 2.250 The best scores are: opt bits E(32554) CCDS894.1 VTCN1 gene_id:79679|Hs108|chr1 ( 282) 1808 342.0 2.9e-94 CCDS58019.1 VTCN1 gene_id:79679|Hs108|chr1 ( 187) 1206 231.7 3.1e-61 CCDS58020.1 VTCN1 gene_id:79679|Hs108|chr1 ( 166) 870 170.1 9.3e-43 CCDS10251.1 CD276 gene_id:80381|Hs108|chr15 ( 316) 335 72.4 4.7e-13 CCDS32288.1 CD276 gene_id:80381|Hs108|chr15 ( 534) 325 70.7 2.5e-12 CCDS47358.1 BTNL3 gene_id:10917|Hs108|chr5 ( 466) 308 67.6 2e-11 CCDS74975.1 HHLA2 gene_id:11148|Hs108|chr3 ( 397) 298 65.7 6.2e-11 CCDS46883.1 HHLA2 gene_id:11148|Hs108|chr3 ( 414) 298 65.7 6.4e-11 >>CCDS894.1 VTCN1 gene_id:79679|Hs108|chr1 (282 aa) initn: 1808 init1: 1808 opt: 1808 Z-score: 1805.7 bits: 342.0 E(32554): 2.9e-94 Smith-Waterman score: 1808; 100.0% identity (100.0% similar) in 282 aa overlap (1-282:1-282) 10 20 30 40 50 60 pF1KE2 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTFEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS89 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTFEP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 DIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS89 DIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 QLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFPQPTVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS89 QLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFPQPTVV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 WASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKATGDIKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS89 WASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKATGDIKV 190 200 210 220 230 240 250 260 270 280 pF1KE2 TESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK :::::::::::::::::::::::::::::::::::::::::: CCDS89 TESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK 250 260 270 280 >>CCDS58019.1 VTCN1 gene_id:79679|Hs108|chr1 (187 aa) initn: 1206 init1: 1206 opt: 1206 Z-score: 1212.8 bits: 231.7 E(32554): 3.1e-61 Smith-Waterman score: 1206; 100.0% identity (100.0% similar) in 187 aa overlap (96-282:1-187) 70 80 90 100 110 120 pF1KE2 DIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDA :::::::::::::::::::::::::::::: CCDS58 MFRGRTAVFADQVIVGNASLRLKNVQLTDA 10 20 30 130 140 150 160 170 180 pF1KE2 GTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFPQPTVVWASQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 GTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFPQPTVVWASQV 40 50 60 70 80 90 190 200 210 220 230 240 pF1KE2 DQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKATGDIKVTESEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 DQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKATGDIKVTESEI 100 110 120 130 140 150 250 260 270 280 pF1KE2 KRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK ::::::::::::::::::::::::::::::::::::: CCDS58 KRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK 160 170 180 >>CCDS58020.1 VTCN1 gene_id:79679|Hs108|chr1 (166 aa) initn: 870 init1: 870 opt: 870 Z-score: 881.1 bits: 170.1 E(32554): 9.3e-43 Smith-Waterman score: 870; 90.7% identity (92.7% similar) in 151 aa overlap (132-282:16-166) 110 120 130 140 150 160 pF1KE2 AVFADQVIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNA :: : . . .::::::::::::: CCDS58 MASLGQILFWSIISIIIILAGAIALIIGFGISAFSMPEVNVDYNA 10 20 30 40 170 180 190 200 210 220 pF1KE2 SSETLRCEAPRWFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 SSETLRCEAPRWFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINN 50 60 70 80 90 100 230 240 250 260 270 280 pF1KE2 TYSCMIENDIAKATGDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 TYSCMIENDIAKATGDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLML 110 120 130 140 150 160 pF1KE2 K : CCDS58 K >>CCDS10251.1 CD276 gene_id:80381|Hs108|chr15 (316 aa) initn: 224 init1: 119 opt: 335 Z-score: 347.8 bits: 72.4 E(32554): 4.7e-13 Smith-Waterman score: 335; 29.8% identity (58.7% similar) in 235 aa overlap (18-241:12-238) 10 20 30 40 50 pF1KE2 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTF-- . .:: . : ..: . : .. .: :. : :.: CCDS10 MLRRRGSPGMGVHVGAALGALWFCLTGALEVQVPEDPVVALVGTDATLCCSFSP 10 20 30 40 50 60 70 80 90 100 110 pF1KE2 EPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLK :: ..:... . : . ::: : ::.: : . .:::.: : . :::::::. CCDS10 EPGFSLAQLNLIWQLTDTKQLVHSFAEGQD----QGSAYANRTALFPDLLAQGNASLRLQ 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE2 NVQLTDAGTYKCYIITSKGKGNANLEYKTGA-FSMPEVNVDYN-----ASSETLRCEAPR :...: :.. :.. . . :.: . ...: .: : .... : ... :. : . : CCDS10 RVRVADEGSFTCFV-SIRDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCSSYR 120 130 140 150 160 180 190 200 210 220 230 pF1KE2 WFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVT-INNTYSCMIENDI .:. : : : ::. .. .:: .. .:. . : ::: : :.::::...: . CCDS10 GYPEAEVFW--QDGQGVPLTGNVTTS-QMANEQGLFDVHSVLRVVLGANGTYSCLVRNPV 170 180 190 200 210 220 240 250 260 270 280 pF1KE2 AK--ATGDIKVTESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK . : :.. .: CCDS10 LQQDAHGSVTITGQPMTFPPEALWVTVGLSVCLIALLVALAFVCWRKIKQSCEEENAGAE 230 240 250 260 270 280 >>CCDS32288.1 CD276 gene_id:80381|Hs108|chr15 (534 aa) initn: 329 init1: 119 opt: 325 Z-score: 334.7 bits: 70.7 E(32554): 2.5e-12 Smith-Waterman score: 325; 31.7% identity (61.0% similar) in 205 aa overlap (48-241:260-456) 20 30 40 50 60 70 pF1KE2 ILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTF--EPDIKLSDIVIQWLKEG .: :. : :.: :: ..:... . : CCDS32 DAHSSVTITPQRSPTGAVEVQVPEDPVVALVGTDATLRCSFSPEPGFSLAQLNLIWQLTD 230 240 250 260 270 280 80 90 100 110 120 130 pF1KE2 VLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITS . ::: : ::.: : . .:::.: : . :::::::. :...: :.. :.. . CCDS32 TKQLVHSFTEGRD----QGSAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFV-SI 290 300 310 320 330 340 140 150 160 170 180 pF1KE2 KGKGNANLEYKTGA-FSMPEVNVDYN-----ASSETLRCEAPRWFPQPTVVWASQVDQGA . :.: . ...: .: : .... : ... :. : . : .:. : : : ::. CCDS32 RDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCSSYRGYPEAEVFW--QDGQGV 350 360 370 380 390 400 190 200 210 220 230 240 pF1KE2 NFSEVSNTSFELNSENVTMKVVSVLYNVT-INNTYSCMIENDIAK--ATGDIKVTESEIK .. .:: .. .:. . : ::: : :.::::...: . . : :.. .: CCDS32 PLTGNVTTS-QMANEQGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPMT 410 420 430 440 450 460 250 260 270 280 pF1KE2 RRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK CCDS32 FPPEALWVTVGLSVCLIALLVALAFVCWRKIKQSCEEENAGAEDQDGEGEGSKTALQPLK 470 480 490 500 510 520 >>CCDS47358.1 BTNL3 gene_id:10917|Hs108|chr5 (466 aa) initn: 275 init1: 221 opt: 308 Z-score: 318.7 bits: 67.6 E(32554): 2e-11 Smith-Waterman score: 308; 29.8% identity (63.5% similar) in 178 aa overlap (19-192:1-176) 10 20 30 40 50 pF1KE2 MASLGQILFWSIISIIIILAGAIALIIGFG--ISGRHSITVTTVASAGNIGEDGILSCTF .: .. :...: .::. ..: . .:::...::.. CCDS47 MAFVLILVLSFYELVSGQWQVTGPGKFVQALVGEDAVFSCSL 10 20 30 40 60 70 80 90 100 110 pF1KE2 EPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLK :. . . ...... ..:: ...:.: :.: ..:::: :.. : .::::: CCDS47 FPETSAEAMEVRFFRNQFHAVVHLYRDGEDWESKQMPQYRGRTEFVKDSIAGGRVSLRLK 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE2 NVQLTDAGTYKCYIITSKGKGNANLEYKTGAF-SMPEVN-VDYNASSETLRCEAPRWFPQ :. .: : : :.. .. .:. : ...:. :.: .. : : .. : : . :::: CCDS47 NITPSDIGLYGCWFSSQIYDEEATWELRVAALGSLPLISIVGYVDGGIQLLCLSSGWFPQ 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE2 PTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKATG ::. : . :: ..: CCDS47 PTAKWKGP--QGQDLSSDSRANADGYSLYDVEISIIVQENAGSILCSIHLAEQSHEVESK 170 180 190 200 210 220 >>CCDS74975.1 HHLA2 gene_id:11148|Hs108|chr3 (397 aa) initn: 227 init1: 159 opt: 298 Z-score: 309.8 bits: 65.7 E(32554): 6.2e-11 Smith-Waterman score: 298; 26.6% identity (58.5% similar) in 241 aa overlap (46-281:41-271) 20 30 40 50 60 70 pF1KE2 IIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEG : . :: :: .:: . :..::.: . CCDS74 LILITSLSGSQGIFPLAFFIYVPMNEQIVIGRLDEDIILPSSFE---RGSEVVIHWKYQD 20 30 40 50 60 80 90 100 110 120 130 pF1KE2 VLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITS :: . .:.:.: :: . .::..: ... ::::: .. :.: : : : ::. :. CCDS74 SYK-VHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTCYVGTA 70 80 90 100 110 120 140 150 160 170 180 190 pF1KE2 KGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFPQPTVVWASQVDQGANFSEVS . .. :.:.: : .. . .. : : . .:.: ..: ..:. . .: CCDS74 IQVITNKVVLKVGVFLTPVMKYEKRNTNSFLICSVLSVYPRPIITW--KMDN----TPIS 130 140 150 160 170 180 200 210 220 230 240 250 pF1KE2 NTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKAT--GDIKVTESEIKRRS-HLQ ....: .. .... : : . :..: : :::.. : : : . .. : .: :.. CCDS74 ENNMEETGSLDSFSINSPLNITGSNSSYECTIENSLLKQTWTGRWTMKDGLHKMQSEHVS 190 200 210 220 230 240 260 270 280 pF1KE2 LLNSKAS--LCVSSFFAISWALLPLSPYLMLK : . .. . .. : ..:. . . . .: CCDS74 LSCQPVNDYFSPNQDFKVTWSRMKSGTFSVLAYYLSSSQNTIINESRFSWNKELINQSDF 250 260 270 280 290 300 CCDS74 SMNLMDLNLSDSGEYLCNISSDEYTLLTIHTVHVEPSQETASHNKGLWILVPSAILAAFL 310 320 330 340 350 360 >>CCDS46883.1 HHLA2 gene_id:11148|Hs108|chr3 (414 aa) initn: 227 init1: 159 opt: 298 Z-score: 309.6 bits: 65.7 E(32554): 6.4e-11 Smith-Waterman score: 298; 26.6% identity (58.5% similar) in 241 aa overlap (46-281:41-271) 20 30 40 50 60 70 pF1KE2 IIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEG : . :: :: .:: . :..::.: . CCDS46 LILITSLSGSQGIFPLAFFIYVPMNEQIVIGRLDEDIILPSSFE---RGSEVVIHWKYQD 20 30 40 50 60 80 90 100 110 120 130 pF1KE2 VLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITS :: . .:.:.: :: . .::..: ... ::::: .. :.: : : : ::. :. CCDS46 SYK-VHSYYKGSDHLESQDPRYANRTSLFYNEIQNGNASLFFRRVSLLDEGIYTCYVGTA 70 80 90 100 110 120 140 150 160 170 180 190 pF1KE2 KGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFPQPTVVWASQVDQGANFSEVS . .. :.:.: : .. . .. : : . .:.: ..: ..:. . .: CCDS46 IQVITNKVVLKVGVFLTPVMKYEKRNTNSFLICSVLSVYPRPIITW--KMDN----TPIS 130 140 150 160 170 180 200 210 220 230 240 250 pF1KE2 NTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKAT--GDIKVTESEIKRRS-HLQ ....: .. .... : : . :..: : :::.. : : : . .. : .: :.. CCDS46 ENNMEETGSLDSFSINSPLNITGSNSSYECTIENSLLKQTWTGRWTMKDGLHKMQSEHVS 190 200 210 220 230 240 260 270 280 pF1KE2 LLNSKAS--LCVSSFFAISWALLPLSPYLMLK : . .. . .. : ..:. . . . .: CCDS46 LSCQPVNDYFSPNQDFKVTWSRMKSGTFSVLAYYLSSSQNTIINESRFSWNKELINQSDF 250 260 270 280 290 300 CCDS46 SMNLMDLNLSDSGEYLCNISSDEYTLLTIHTVHVEPSQETASHNKGLWILVPSAILAAFL 310 320 330 340 350 360 282 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 18:57:54 2016 done: Sun Nov 6 18:57:54 2016 Total Scan time: 2.250 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]