FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2018, 594 aa 1>>>pF1KE2018 594 - 594 aa - 594 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.9648+/-0.000987; mu= 15.1174+/- 0.059 mean_var=65.1208+/-13.282, 0's: 0 Z-trim(103.3): 28 B-trim: 0 in 0/53 Lambda= 0.158933 statistics sampled from 7322 (7328) to 7322 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.582), E-opt: 0.2 (0.225), width: 16 Scan time: 3.240 The best scores are: opt bits E(32554) CCDS738.1 GLMN gene_id:11146|Hs108|chr1 ( 594) 3862 894.7 0 >>CCDS738.1 GLMN gene_id:11146|Hs108|chr1 (594 aa) initn: 3862 init1: 3862 opt: 3862 Z-score: 4781.5 bits: 894.7 E(32554): 0 Smith-Waterman score: 3862; 100.0% identity (100.0% similar) in 594 aa overlap (1-594:1-594) 10 20 30 40 50 60 pF1KE2 MAVEELQSIIKRCQILEEQDFKEEDFGLFQLAGQRCIEEGHTDQLLEIIQNEKNKVIIKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 MAVEELQSIIKRCQILEEQDFKEEDFGLFQLAGQRCIEEGHTDQLLEIIQNEKNKVIIKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 MGWNLVGPVVRCLLCKDKEDSKRKVYFLIFDLLVKLCNPKELLLGLLELIEEPSGKQISQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 MGWNLVGPVVRCLLCKDKEDSKRKVYFLIFDLLVKLCNPKELLLGLLELIEEPSGKQISQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 SILLLLQPLQTVIQKLHNKAYSIGLALSTLWNQLSLLPVPYSKEQIQMDDYGLCQCCKAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 SILLLLQPLQTVIQKLHNKAYSIGLALSTLWNQLSLLPVPYSKEQIQMDDYGLCQCCKAL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 IEFTKPFVEEVIDNKENSLENEKLKDELLKFCFKSLKCPLLTAQFFEQSEEGGNDPFRYF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 IEFTKPFVEEVIDNKENSLENEKLKDELLKFCFKSLKCPLLTAQFFEQSEEGGNDPFRYF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 ASEIIGFLSAIGHPFPKMIFNHGRKKRTWNYLEFEEEENKQLADSMASLAYLVFVQGIHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 ASEIIGFLSAIGHPFPKMIFNHGRKKRTWNYLEFEEEENKQLADSMASLAYLVFVQGIHI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 DQLPMVLSPLYLLQFNMGHIEVFLQRTEESVISKGLELLENSLLRIEDNSLLYQYLEIKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 DQLPMVLSPLYLLQFNMGHIEVFLQRTEESVISKGLELLENSLLRIEDNSLLYQYLEIKS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 FLTVPQGLVKVMTLCPIETLRKKSLAMLQLYINKLDSQGKYTLFRCLLNTSNHSGVEAFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 FLTVPQGLVKVMTLCPIETLRKKSLAMLQLYINKLDSQGKYTLFRCLLNTSNHSGVEAFI 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 IQNIKNQIDMSLKRTRNNKWFTGPQLISLLDLVLFLPEGAETDLLQNSDRIMASLNLLRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 IQNIKNQIDMSLKRTRNNKWFTGPQLISLLDLVLFLPEGAETDLLQNSDRIMASLNLLRY 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 LVIKDNENDNQTGLWTELGNIENNFLKPLHIGLNMSKAHYEAEIKNSQEAQKSKDLCSIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 LVIKDNENDNQTGLWTELGNIENNFLKPLHIGLNMSKAHYEAEIKNSQEAQKSKDLCSIT 490 500 510 520 530 540 550 560 570 580 590 pF1KE2 VSGEEIPNMPPEMQLKVLHSALFTFDLIESVLARVEELIEIKTKSTSEENIGIK :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 VSGEEIPNMPPEMQLKVLHSALFTFDLIESVLARVEELIEIKTKSTSEENIGIK 550 560 570 580 590 594 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 19:13:36 2016 done: Sun Nov 6 19:13:37 2016 Total Scan time: 3.240 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]