FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3119, 293 aa 1>>>pF1KE3119 293 - 293 aa - 293 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0711+/-0.000731; mu= 15.9982+/- 0.044 mean_var=60.4732+/-11.944, 0's: 0 Z-trim(108.1): 32 B-trim: 0 in 0/49 Lambda= 0.164927 statistics sampled from 9972 (9998) to 9972 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.707), E-opt: 0.2 (0.307), width: 16 Scan time: 2.200 The best scores are: opt bits E(32554) CCDS133.1 FBXO6 gene_id:26270|Hs108|chr1 ( 293) 2065 499.6 1.1e-141 CCDS132.1 FBXO44 gene_id:93611|Hs108|chr1 ( 255) 1352 329.9 1.2e-90 CCDS130.1 FBXO2 gene_id:26232|Hs108|chr1 ( 296) 895 221.2 7.2e-58 CCDS131.1 FBXO44 gene_id:93611|Hs108|chr1 ( 224) 692 172.9 2e-43 CCDS81261.1 FBXO44 gene_id:93611|Hs108|chr1 ( 256) 684 171.0 8.2e-43 CCDS12527.1 FBXO27 gene_id:126433|Hs108|chr19 ( 283) 676 169.1 3.4e-42 CCDS12526.1 FBXO17 gene_id:115290|Hs108|chr19 ( 278) 492 125.3 5e-29 CCDS12529.1 NCCRP1 gene_id:342897|Hs108|chr19 ( 275) 337 88.4 6.3e-18 >>CCDS133.1 FBXO6 gene_id:26270|Hs108|chr1 (293 aa) initn: 2065 init1: 2065 opt: 2065 Z-score: 2657.0 bits: 499.6 E(32554): 1.1e-141 Smith-Waterman score: 2065; 100.0% identity (100.0% similar) in 293 aa overlap (1-293:1-293) 10 20 30 40 50 60 pF1KE3 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EGFITKDWDQPVADWKIFYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDRWKVESLPGAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 EGFITKDWDQPVADWKIFYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDRWKVESLPGAH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 GTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 GTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 YQLKVQLASADYFVLASFEPPPVTIQQWNNATWTEVSYTFSDYPRGVRYILFQHGGRDTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 YQLKVQLASADYFVLASFEPPPVTIQQWNNATWTEVSYTFSDYPRGVRYILFQHGGRDTQ 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 YWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPGQKHGQEEAAQSPYRAVVQIF ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 YWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPGQKHGQEEAAQSPYRAVVQIF 250 260 270 280 290 >>CCDS132.1 FBXO44 gene_id:93611|Hs108|chr1 (255 aa) initn: 1397 init1: 1346 opt: 1352 Z-score: 1741.1 bits: 329.9 E(32554): 1.2e-90 Smith-Waterman score: 1352; 75.1% identity (87.4% similar) in 253 aa overlap (9-261:2-254) 10 20 30 40 50 60 pF1KE3 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLR :. .::::::::::::::::::::::::::::::::::::::.::::::::: CCDS13 MAVGNINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLWKRKCLR 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 EGFITKDWDQPVADWKIFYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDRWKVESLPGAH :::::.:::::::::::::::::::::::.:::::: . :..: ::::.::::.: . CCDS13 EGFITEDWDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVEDLSRDQ 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE3 GTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCT .::. .::::::::: :::::.::: ::::::::.:: :::: :::::::: ::: CCDS13 RKEFPNDQVKKYFVTSYYTCLKSQVVDLKAEGYWEELMDTTRPDIEVKDWFAARPDCGSK 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE3 YQLKVQLASADYFVLASFEPPPVTIQQWNNATWTEVSYTFSDYPRGVRYILFQHGGRDTQ ::: ::: :. . :..:.: :.:::: ..: : :::.:::.:: ::::: ::::: ::. CCDS13 YQLCVQLLSSAHAPLGTFQPDPATIQQKSDAKWREVSHTFSNYPPGVRYIWFQHGGVDTH 180 190 200 210 220 230 250 260 270 280 290 pF1KE3 YWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPGQKHGQEEAAQSPYRAVVQIF :::::::::::::::...: . CCDS13 YWAGWYGPRVTNSSITIGPPLP 240 250 >>CCDS130.1 FBXO2 gene_id:26232|Hs108|chr1 (296 aa) initn: 835 init1: 299 opt: 895 Z-score: 1152.4 bits: 221.2 E(32554): 7.2e-58 Smith-Waterman score: 895; 50.2% identity (72.9% similar) in 255 aa overlap (8-259:42-296) 10 20 30 pF1KE3 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNC :: ..:::: .::.... .:: .:. : CCDS13 QPEEASPEEQPEEASAEEERPEDQQEEEAAAAAAYLDELPEPLLLRVLAALPAAELVQAC 20 30 40 50 60 70 40 50 60 70 80 90 pF1KE3 RLVCSLWRDLIDLMTLWKRKCLREGFITKDWDQPVAD-WKIFYFLRSLHRNLLRNPCAEE :::: :..:.: :: :: .::.. . . : :. :::: . .::::::::.:: CCDS13 RLVCLRWKELVDGAPLWLLKCQQEGLVPEGGVEEERDHWQQFYFLSKRRRNLLRNPCGEE 80 90 100 110 120 130 100 110 120 130 140 150 pF1KE3 DMFAWQIDFNGGDRWKVESLPGAHGTDFP-DPKVKKYFVTSYEMCLKSQLVDLVAEGYWE :. .: .::: :.:: ::: :..: : .:::::..:.: : :.:..:: :::::: CCDS13 DLEGWCDVEHGGDGWRVEELPGDSGVEFTHDESVKKYFASSFEWCRKAQVIDLQAEGYWE 140 150 160 170 180 190 160 170 180 190 200 210 pF1KE3 ELLDTFRPDIVVKDWFAARADCGCTYQLKVQLASADYFVLASFEPPPVTI-QQWNNATWT ::::: .: ::::::...:.: :: :.: :.: : ::: : :.. :. ... : CCDS13 ELLDTTQPAIVVKDWYSGRSDAGCLYELTVKLLSEHENVLAEFSSGQVAVPQDSDGGGWM 200 210 220 230 240 250 220 230 240 250 260 270 pF1KE3 EVSYTFSDYPRGVRYILFQHGGRDTQYWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPGQ :.:.::.:: :::.. :.:::.:. :: ::.: ::::::. : : CCDS13 EISHTFTDYGPGVRFVRFEHGGQDSVYWKGWFGARVTNSSVWVEP 260 270 280 290 280 290 pF1KE3 KHGQEEAAQSPYRAVVQIF >>CCDS131.1 FBXO44 gene_id:93611|Hs108|chr1 (224 aa) initn: 686 init1: 686 opt: 692 Z-score: 893.2 bits: 172.9 E(32554): 2e-43 Smith-Waterman score: 692; 78.7% identity (91.0% similar) in 122 aa overlap (9-130:2-123) 10 20 30 40 50 60 pF1KE3 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLR :. .::::::::::::::::::::::::::::::::::::::.::::::::: CCDS13 MAVGNINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLWKRKCLR 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 EGFITKDWDQPVADWKIFYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDRWKVESLPGAH :::::.:::::::::::::::::::::::.:::::: . :..: ::::.::::.: . CCDS13 EGFITEDWDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVEDLSRDQ 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE3 GTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCT .::. .:. CCDS13 RKEFPNDQVRSQARLRVQVPAVRSAPVVRARASGDLPARPGDHPAEERCQVEGGLPHILQ 120 130 140 150 160 170 >>CCDS81261.1 FBXO44 gene_id:93611|Hs108|chr1 (256 aa) initn: 700 init1: 678 opt: 684 Z-score: 882.1 bits: 171.0 E(32554): 8.2e-43 Smith-Waterman score: 684; 79.2% identity (90.8% similar) in 120 aa overlap (9-128:2-121) 10 20 30 40 50 60 pF1KE3 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLR :. .::::::::::::::::::::::::::::::::::::::.::::::::: CCDS81 MAVGNINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLWKRKCLR 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 EGFITKDWDQPVADWKIFYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDRWKVESLPGAH :::::.:::::::::::::::::::::::.:::::: . :..: ::::.::::.: . CCDS81 EGFITEDWDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVEDLSRDQ 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE3 GTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCT .::. . CCDS81 RKEFPNDQHLPQVPGGGPQGRRVLGGADGYHTAGHRGQGLVRSQARLRVQVPAVRSAPVV 120 130 140 150 160 170 >>CCDS12527.1 FBXO27 gene_id:126433|Hs108|chr19 (283 aa) initn: 663 init1: 450 opt: 676 Z-score: 871.1 bits: 169.1 E(32554): 3.4e-42 Smith-Waterman score: 676; 40.4% identity (63.6% similar) in 272 aa overlap (4-262:18-283) 10 20 30 40 pF1KE3 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRD :. . ::: ...:: ..:: ...::: : :: :: :: :: CCDS12 MGASVSRGRAARVPAPEPEPEEALD-LSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRA 10 20 30 40 50 50 60 70 80 90 pF1KE3 LIDLMTLWKRKCLREG--------FITKDWDQPVADWKI-----FYFLRSLHRNLLRNPC :.: ..:: :. .... ..:. . . : : . :::.:::: CCDS12 LVDGQALWLLILARDHGATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPC 60 70 80 90 100 110 100 110 120 130 140 150 pF1KE3 AEEDMFAWQIDFNGGDRWKVESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGY ..: . :... .::: : :: . : : . ::::. : :.:..:: :: CCDS12 GQEGLRKWMVQ-HGGDGWVVEE----NRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGL 120 130 140 150 160 170 160 170 180 190 200 210 pF1KE3 WEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATW : ::::. : .: :.::..:: : :: :.: ::: .:. :: .: : : :::: . CCDS12 WPELLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNAC 180 190 200 210 220 230 220 230 240 250 260 270 pF1KE3 TEVSYTFSDYPRGVRYILFQHGGRDTQYWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPG .:...::. :::.. :.: :.:::.::: :: ::::::..: ... CCDS12 LHVTHVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS 240 250 260 270 280 280 290 pF1KE3 QKHGQEEAAQSPYRAVVQIF >>CCDS12526.1 FBXO17 gene_id:115290|Hs108|chr19 (278 aa) initn: 571 init1: 409 opt: 492 Z-score: 634.6 bits: 125.3 E(32554): 5e-29 Smith-Waterman score: 601; 36.7% identity (63.3% similar) in 267 aa overlap (12-262:17-278) 10 20 30 40 50 pF1KE3 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWK ... :: ..:.....::: :.:. :: :: :::..: :.: CCDS12 MGARLSRRRLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWL 10 20 30 40 50 60 60 70 80 90 pF1KE3 RKCLR----EGFITKDWDQ---PVA-DWKIF-------YFLRS-LHRNLLRNPCAEEDMF . : :: : : : . : : ::. . :::. : :.:. . CCDS12 LQLARDRSAEGRALYAVAQRCLPSNEDKEEFPLCALARYCLRAPFGRNLIFNSCGEQGFR 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE3 AWQIDFNGGDRWKVESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLD .:... .::. : .:. . : : . ::::.: : : :::::: :: :.:::: CCDS12 GWEVE-HGGNGWAIEK----NLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLD 130 140 150 160 170 160 170 180 190 200 210 pF1KE3 TFRPDIVVKDWFAARADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATWTEVSYT . . .: : ::..:: .:::.:::.:.: .. ...: : . ::.. .::.. CCDS12 SAQIEICVADWWGARENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHV 180 190 200 210 220 230 220 230 240 250 260 270 pF1KE3 FSDYPRGVRYILFQHGGRDTQYWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPGQKHGQE :... .:.::. :.. :::.. :.: :: ::.::. : ... CCDS12 FTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTHSSVRVRIRLS 240 250 260 270 280 290 pF1KE3 EAAQSPYRAVVQIF >>CCDS12529.1 NCCRP1 gene_id:342897|Hs108|chr19 (275 aa) initn: 340 init1: 173 opt: 337 Z-score: 435.4 bits: 88.4 E(32554): 6.3e-18 Smith-Waterman score: 337; 36.2% identity (60.5% similar) in 185 aa overlap (75-257:92-271) 50 60 70 80 90 100 pF1KE3 RDLIDLMTLWKRKCLREGFITKDWDQPVADWKIFYFLRSLHRNLLRNPCAEEDMFAWQID ::.. . : :.:::::.: : . CCDS12 AQPSEAHARQLLLEEWGPLSGGLELPQRLTWKLLLLRRPLYRNLLRSPNPEGINIYEPAP 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE3 FNGGDRWKVESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLDTFRPD .: . .:.: . .: . :... . .:.: :::.::: :::::: .: CCDS12 PTGPTQRPLETLGNFRGWYIRTEKLQQ----NQSWTVKQQCVDLLAEGLWEELLDDEQPA 130 140 150 160 170 170 180 190 200 210 220 pF1KE3 IVVKDWFA-ARADCGCTYQLKVQLASADY-FVLASFEPPPVTIQQWNNATWTEVSYTFSD :.: ::: .: : .:.:.:.: : .:: :.:. . : : . . :..::..: CCDS12 ITVMDWFEDSRLD-ACVYELHVWLLAADRRTVIAQHHVAPRTSGRGPPGRWVQVSHVFRH 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE3 YPRGVRYILFQHGGRDTQYWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPGQKHGQEEAA : :::.: : : ... . .: :::.::. : CCDS12 YGPGVRFIHFLHKAKNRMEPGGLRRTRVTDSSVSVQLRE 240 250 260 270 290 pF1KE3 QSPYRAVVQIF 293 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 19:30:49 2016 done: Sun Nov 6 19:30:49 2016 Total Scan time: 2.200 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]