FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1815, 331 aa 1>>>pF1KE1815 331 - 331 aa - 331 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.4525+/-0.000902; mu= 5.3672+/- 0.054 mean_var=115.1379+/-22.478, 0's: 0 Z-trim(108.9): 23 B-trim: 11 in 1/52 Lambda= 0.119527 statistics sampled from 10505 (10514) to 10505 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.7), E-opt: 0.2 (0.323), width: 16 Scan time: 2.530 The best scores are: opt bits E(32554) CCDS118.1 DFFA gene_id:1676|Hs108|chr1 ( 331) 2118 376.1 2.2e-104 CCDS119.1 DFFA gene_id:1676|Hs108|chr1 ( 268) 1669 298.6 3.8e-81 >>CCDS118.1 DFFA gene_id:1676|Hs108|chr1 (331 aa) initn: 2118 init1: 2118 opt: 2118 Z-score: 1987.4 bits: 376.1 E(32554): 2.2e-104 Smith-Waterman score: 2118; 100.0% identity (100.0% similar) in 331 aa overlap (1-331:1-331) 10 20 30 40 50 60 pF1KE1 MEVTGDAGVPESGEIRTLKPCLLRRNYSREQHGVAASCLEDLRSKACDILAIDKSLTPVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MEVTGDAGVPESGEIRTLKPCLLRRNYSREQHGVAASCLEDLRSKACDILAIDKSLTPVT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LVLAEDGTIVDDDDYFLCLPSNTKFVALASNEKWAYNNSDGGTAWISQESFDVDETDSGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LVLAEDGTIVDDDDYFLCLPSNTKFVALASNEKWAYNNSDGGTAWISQESFDVDETDSGA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 GLKWKNVARQLKEDLSSIILLSEEDLQMLVDAPCSDLAQELRQSCATVQRLQHTLQQVLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 GLKWKNVARQLKEDLSSIILLSEEDLQMLVDAPCSDLAQELRQSCATVQRLQHTLQQVLD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 QREEVRQSKQLLQLYLQALEKEGSLLSKQEESKAAFGEEVDAVDTGISRETSSDVALASH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 QREEVRQSKQLLQLYLQALEKEGSLLSKQEESKAAFGEEVDAVDTGISRETSSDVALASH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 ILTALREKQAPELSLSSQDLELVTKEDPKALAVALNWDIKKTETVQEACERELALRLQQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 ILTALREKQAPELSLSSQDLELVTKEDPKALAVALNWDIKKTETVQEACERELALRLQQT 250 260 270 280 290 300 310 320 330 pF1KE1 QSLHSLRSISASKASPPGDLQNPKRARQDPT ::::::::::::::::::::::::::::::: CCDS11 QSLHSLRSISASKASPPGDLQNPKRARQDPT 310 320 330 >>CCDS119.1 DFFA gene_id:1676|Hs108|chr1 (268 aa) initn: 1669 init1: 1669 opt: 1669 Z-score: 1570.4 bits: 298.6 E(32554): 3.8e-81 Smith-Waterman score: 1669; 99.6% identity (100.0% similar) in 262 aa overlap (1-262:1-262) 10 20 30 40 50 60 pF1KE1 MEVTGDAGVPESGEIRTLKPCLLRRNYSREQHGVAASCLEDLRSKACDILAIDKSLTPVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MEVTGDAGVPESGEIRTLKPCLLRRNYSREQHGVAASCLEDLRSKACDILAIDKSLTPVT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LVLAEDGTIVDDDDYFLCLPSNTKFVALASNEKWAYNNSDGGTAWISQESFDVDETDSGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LVLAEDGTIVDDDDYFLCLPSNTKFVALASNEKWAYNNSDGGTAWISQESFDVDETDSGA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 GLKWKNVARQLKEDLSSIILLSEEDLQMLVDAPCSDLAQELRQSCATVQRLQHTLQQVLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 GLKWKNVARQLKEDLSSIILLSEEDLQMLVDAPCSDLAQELRQSCATVQRLQHTLQQVLD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 QREEVRQSKQLLQLYLQALEKEGSLLSKQEESKAAFGEEVDAVDTGISRETSSDVALASH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 QREEVRQSKQLLQLYLQALEKEGSLLSKQEESKAAFGEEVDAVDTGISRETSSDVALASH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 ILTALREKQAPELSLSSQDLELVTKEDPKALAVALNWDIKKTETVQEACERELALRLQQT :::::::::::::::::::::. CCDS11 ILTALREKQAPELSLSSQDLEVGGNQGH 250 260 331 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 19:31:19 2016 done: Sun Nov 6 19:31:19 2016 Total Scan time: 2.530 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]