FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5296, 174 aa 1>>>pF1KE5296 174 - 174 aa - 174 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4291+/-0.000335; mu= 12.5865+/- 0.021 mean_var=74.9886+/-14.859, 0's: 0 Z-trim(116.6): 42 B-trim: 352 in 1/49 Lambda= 0.148107 statistics sampled from 27790 (27832) to 27790 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.707), E-opt: 0.2 (0.326), width: 16 Scan time: 5.180 The best scores are: opt bits E(85289) NP_783653 (OMIM: 274500,606765) thyroid peroxidase ( 760) 1035 230.2 5.6e-60 XP_011508683 (OMIM: 274500,606765) PREDICTED: thyr ( 832) 1035 230.3 6e-60 NP_783650 (OMIM: 274500,606765) thyroid peroxidase ( 876) 1035 230.3 6.3e-60 NP_001193674 (OMIM: 274500,606765) thyroid peroxid ( 876) 1035 230.3 6.3e-60 NP_783652 (OMIM: 274500,606765) thyroid peroxidase ( 889) 1035 230.3 6.3e-60 XP_011508682 (OMIM: 274500,606765) PREDICTED: thyr ( 929) 1035 230.3 6.6e-60 NP_000538 (OMIM: 274500,606765) thyroid peroxidase ( 933) 1035 230.3 6.6e-60 NP_001193673 (OMIM: 274500,606765) thyroid peroxid ( 933) 1035 230.3 6.6e-60 XP_011508681 (OMIM: 274500,606765) PREDICTED: thyr ( 935) 1035 230.3 6.6e-60 NP_000241 (OMIM: 104300,254600,606989) myeloperoxi ( 745) 232 58.6 2.5e-08 NP_000493 (OMIM: 131399,261500) eosinophil peroxid ( 715) 215 55.0 2.9e-07 XP_016868530 (OMIM: 615904) PREDICTED: peroxidasin (1328) 211 54.3 8.8e-07 XP_011515760 (OMIM: 615904) PREDICTED: peroxidasin (1328) 211 54.3 8.8e-07 XP_006716483 (OMIM: 615904) PREDICTED: peroxidasin (1367) 211 54.3 9e-07 XP_011515758 (OMIM: 615904) PREDICTED: peroxidasin (1439) 211 54.3 9.4e-07 XP_011515759 (OMIM: 615904) PREDICTED: peroxidasin (1439) 211 54.3 9.4e-07 NP_653252 (OMIM: 615904) peroxidasin-like protein (1463) 211 54.3 9.5e-07 XP_011508698 (OMIM: 269400,605158) PREDICTED: pero (1296) 195 50.9 9.2e-06 XP_011508699 (OMIM: 269400,605158) PREDICTED: pero (1296) 195 50.9 9.2e-06 XP_005264764 (OMIM: 269400,605158) PREDICTED: pero (1455) 195 50.9 1e-05 NP_036425 (OMIM: 269400,605158) peroxidasin homolo (1479) 195 50.9 1e-05 XP_005251225 (OMIM: 615904) PREDICTED: peroxidasin ( 848) 178 47.1 8.1e-05 >>NP_783653 (OMIM: 274500,606765) thyroid peroxidase iso (760 aa) initn: 1035 init1: 1035 opt: 1035 Z-score: 1197.8 bits: 230.2 E(85289): 5.6e-60 Smith-Waterman score: 1035; 99.4% identity (99.4% similar) in 161 aa overlap (1-161:1-161) 10 20 30 40 50 60 pF1KE5 MRALAVLSVTLVMACTEAFFPFISRGKELLWGKPEESRVSSVLEESKRLVDTAMYATMQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_783 MRALAVLSVTLVMACTEAFFPFISRGKELLWGKPEESRVSSVLEESKRLVDTAMYATMQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 NLKKRGILSAAQLLSFSKLPEPTSGVIARAAEIMETSIQAMKRKVNLKTQQSQHPTDALS ::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: NP_783 NLKKRGILSPAQLLSFSKLPEPTSGVIARAAEIMETSIQAMKRKVNLKTQQSQHPTDALS 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 EDLLSIIANMSGCLPYMLPPKCPNTCLANKYRPITGACNNRKMKYKPDHSETAN ::::::::::::::::::::::::::::::::::::::::: NP_783 EDLLSIIANMSGCLPYMLPPKCPNTCLANKYRPITGACNNRDHPRWGASNTALARWLPPV 130 140 150 160 170 180 NP_783 YEDGFSQPRGWNPGFLYNGFPLPPVREVTRHVIQVSNEVVTDDDRYSDLLMAWGQYIDHD 190 200 210 220 230 240 >>XP_011508683 (OMIM: 274500,606765) PREDICTED: thyroid (832 aa) initn: 1035 init1: 1035 opt: 1035 Z-score: 1197.2 bits: 230.3 E(85289): 6e-60 Smith-Waterman score: 1035; 99.4% identity (99.4% similar) in 161 aa overlap (1-161:1-161) 10 20 30 40 50 60 pF1KE5 MRALAVLSVTLVMACTEAFFPFISRGKELLWGKPEESRVSSVLEESKRLVDTAMYATMQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MRALAVLSVTLVMACTEAFFPFISRGKELLWGKPEESRVSSVLEESKRLVDTAMYATMQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 NLKKRGILSAAQLLSFSKLPEPTSGVIARAAEIMETSIQAMKRKVNLKTQQSQHPTDALS ::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NLKKRGILSPAQLLSFSKLPEPTSGVIARAAEIMETSIQAMKRKVNLKTQQSQHPTDALS 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 EDLLSIIANMSGCLPYMLPPKCPNTCLANKYRPITGACNNRKMKYKPDHSETAN ::::::::::::::::::::::::::::::::::::::::: XP_011 EDLLSIIANMSGCLPYMLPPKCPNTCLANKYRPITGACNNRDHPRWGASNTALARWLPPV 130 140 150 160 170 180 XP_011 YEDGFSQPRGWNPGFLYNGFPLPPVREVTRHVIQVSNEVVTDDDRYSDLLMAWGQYIDHD 190 200 210 220 230 240 >>NP_783650 (OMIM: 274500,606765) thyroid peroxidase iso (876 aa) initn: 1035 init1: 1035 opt: 1035 Z-score: 1196.9 bits: 230.3 E(85289): 6.3e-60 Smith-Waterman score: 1035; 99.4% identity (99.4% similar) in 161 aa overlap (1-161:1-161) 10 20 30 40 50 60 pF1KE5 MRALAVLSVTLVMACTEAFFPFISRGKELLWGKPEESRVSSVLEESKRLVDTAMYATMQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_783 MRALAVLSVTLVMACTEAFFPFISRGKELLWGKPEESRVSSVLEESKRLVDTAMYATMQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 NLKKRGILSAAQLLSFSKLPEPTSGVIARAAEIMETSIQAMKRKVNLKTQQSQHPTDALS ::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: NP_783 NLKKRGILSPAQLLSFSKLPEPTSGVIARAAEIMETSIQAMKRKVNLKTQQSQHPTDALS 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 EDLLSIIANMSGCLPYMLPPKCPNTCLANKYRPITGACNNRKMKYKPDHSETAN ::::::::::::::::::::::::::::::::::::::::: NP_783 EDLLSIIANMSGCLPYMLPPKCPNTCLANKYRPITGACNNRDHPRWGASNTALARWLPPV 130 140 150 160 170 180 NP_783 YEDGFSQPRGWNPGFLYNGFPLPPVREVTRHVIQVSNEVVTDDDRYSDLLMAWGQYIDHD 190 200 210 220 230 240 >>NP_001193674 (OMIM: 274500,606765) thyroid peroxidase (876 aa) initn: 1035 init1: 1035 opt: 1035 Z-score: 1196.9 bits: 230.3 E(85289): 6.3e-60 Smith-Waterman score: 1035; 99.4% identity (99.4% similar) in 161 aa overlap (1-161:1-161) 10 20 30 40 50 60 pF1KE5 MRALAVLSVTLVMACTEAFFPFISRGKELLWGKPEESRVSSVLEESKRLVDTAMYATMQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MRALAVLSVTLVMACTEAFFPFISRGKELLWGKPEESRVSSVLEESKRLVDTAMYATMQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 NLKKRGILSAAQLLSFSKLPEPTSGVIARAAEIMETSIQAMKRKVNLKTQQSQHPTDALS ::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NLKKRGILSPAQLLSFSKLPEPTSGVIARAAEIMETSIQAMKRKVNLKTQQSQHPTDALS 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 EDLLSIIANMSGCLPYMLPPKCPNTCLANKYRPITGACNNRKMKYKPDHSETAN ::::::::::::::::::::::::::::::::::::::::: NP_001 EDLLSIIANMSGCLPYMLPPKCPNTCLANKYRPITGACNNRDHPRWGASNTALARWLPPV 130 140 150 160 170 180 NP_001 YEDGFSQPRGWNPGFLYNGFPLPPVREVTRHVIQVSNEVVTDDDRYSDLLMAWGQYIDHD 190 200 210 220 230 240 >>NP_783652 (OMIM: 274500,606765) thyroid peroxidase iso (889 aa) initn: 1035 init1: 1035 opt: 1035 Z-score: 1196.8 bits: 230.3 E(85289): 6.3e-60 Smith-Waterman score: 1035; 99.4% identity (99.4% similar) in 161 aa overlap (1-161:1-161) 10 20 30 40 50 60 pF1KE5 MRALAVLSVTLVMACTEAFFPFISRGKELLWGKPEESRVSSVLEESKRLVDTAMYATMQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_783 MRALAVLSVTLVMACTEAFFPFISRGKELLWGKPEESRVSSVLEESKRLVDTAMYATMQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 NLKKRGILSAAQLLSFSKLPEPTSGVIARAAEIMETSIQAMKRKVNLKTQQSQHPTDALS ::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: NP_783 NLKKRGILSPAQLLSFSKLPEPTSGVIARAAEIMETSIQAMKRKVNLKTQQSQHPTDALS 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 EDLLSIIANMSGCLPYMLPPKCPNTCLANKYRPITGACNNRKMKYKPDHSETAN ::::::::::::::::::::::::::::::::::::::::: NP_783 EDLLSIIANMSGCLPYMLPPKCPNTCLANKYRPITGACNNRDHPRWGASNTALARWLPPV 130 140 150 160 170 180 NP_783 YEDGFSQPRGWNPGFLYNGFPLPPVREVTRHVIQVSNEVVTDDDRYSDLLMAWGQYIDHD 190 200 210 220 230 240 >>XP_011508682 (OMIM: 274500,606765) PREDICTED: thyroid (929 aa) initn: 1035 init1: 1035 opt: 1035 Z-score: 1196.6 bits: 230.3 E(85289): 6.6e-60 Smith-Waterman score: 1035; 99.4% identity (99.4% similar) in 161 aa overlap (1-161:1-161) 10 20 30 40 50 60 pF1KE5 MRALAVLSVTLVMACTEAFFPFISRGKELLWGKPEESRVSSVLEESKRLVDTAMYATMQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MRALAVLSVTLVMACTEAFFPFISRGKELLWGKPEESRVSSVLEESKRLVDTAMYATMQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 NLKKRGILSAAQLLSFSKLPEPTSGVIARAAEIMETSIQAMKRKVNLKTQQSQHPTDALS ::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NLKKRGILSPAQLLSFSKLPEPTSGVIARAAEIMETSIQAMKRKVNLKTQQSQHPTDALS 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 EDLLSIIANMSGCLPYMLPPKCPNTCLANKYRPITGACNNRKMKYKPDHSETAN ::::::::::::::::::::::::::::::::::::::::: XP_011 EDLLSIIANMSGCLPYMLPPKCPNTCLANKYRPITGACNNRDHPRWGASNTALARWLPPV 130 140 150 160 170 180 XP_011 YEDGFSQPRGWNPGFLYNGFPLPPVREVTRHVIQVSNEVVTDDDRYSDLLMAWGQYIDHD 190 200 210 220 230 240 >>NP_000538 (OMIM: 274500,606765) thyroid peroxidase iso (933 aa) initn: 1035 init1: 1035 opt: 1035 Z-score: 1196.5 bits: 230.3 E(85289): 6.6e-60 Smith-Waterman score: 1035; 99.4% identity (99.4% similar) in 161 aa overlap (1-161:1-161) 10 20 30 40 50 60 pF1KE5 MRALAVLSVTLVMACTEAFFPFISRGKELLWGKPEESRVSSVLEESKRLVDTAMYATMQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MRALAVLSVTLVMACTEAFFPFISRGKELLWGKPEESRVSSVLEESKRLVDTAMYATMQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 NLKKRGILSAAQLLSFSKLPEPTSGVIARAAEIMETSIQAMKRKVNLKTQQSQHPTDALS ::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 NLKKRGILSPAQLLSFSKLPEPTSGVIARAAEIMETSIQAMKRKVNLKTQQSQHPTDALS 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 EDLLSIIANMSGCLPYMLPPKCPNTCLANKYRPITGACNNRKMKYKPDHSETAN ::::::::::::::::::::::::::::::::::::::::: NP_000 EDLLSIIANMSGCLPYMLPPKCPNTCLANKYRPITGACNNRDHPRWGASNTALARWLPPV 130 140 150 160 170 180 NP_000 YEDGFSQPRGWNPGFLYNGFPLPPVREVTRHVIQVSNEVVTDDDRYSDLLMAWGQYIDHD 190 200 210 220 230 240 >>NP_001193673 (OMIM: 274500,606765) thyroid peroxidase (933 aa) initn: 1035 init1: 1035 opt: 1035 Z-score: 1196.5 bits: 230.3 E(85289): 6.6e-60 Smith-Waterman score: 1035; 99.4% identity (99.4% similar) in 161 aa overlap (1-161:1-161) 10 20 30 40 50 60 pF1KE5 MRALAVLSVTLVMACTEAFFPFISRGKELLWGKPEESRVSSVLEESKRLVDTAMYATMQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MRALAVLSVTLVMACTEAFFPFISRGKELLWGKPEESRVSSVLEESKRLVDTAMYATMQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 NLKKRGILSAAQLLSFSKLPEPTSGVIARAAEIMETSIQAMKRKVNLKTQQSQHPTDALS ::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NLKKRGILSPAQLLSFSKLPEPTSGVIARAAEIMETSIQAMKRKVNLKTQQSQHPTDALS 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 EDLLSIIANMSGCLPYMLPPKCPNTCLANKYRPITGACNNRKMKYKPDHSETAN ::::::::::::::::::::::::::::::::::::::::: NP_001 EDLLSIIANMSGCLPYMLPPKCPNTCLANKYRPITGACNNRDHPRWGASNTALARWLPPV 130 140 150 160 170 180 NP_001 YEDGFSQPRGWNPGFLYNGFPLPPVREVTRHVIQVSNEVVTDDDRYSDLLMAWGQYIDHD 190 200 210 220 230 240 >>XP_011508681 (OMIM: 274500,606765) PREDICTED: thyroid (935 aa) initn: 1035 init1: 1035 opt: 1035 Z-score: 1196.5 bits: 230.3 E(85289): 6.6e-60 Smith-Waterman score: 1035; 99.4% identity (99.4% similar) in 161 aa overlap (1-161:1-161) 10 20 30 40 50 60 pF1KE5 MRALAVLSVTLVMACTEAFFPFISRGKELLWGKPEESRVSSVLEESKRLVDTAMYATMQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MRALAVLSVTLVMACTEAFFPFISRGKELLWGKPEESRVSSVLEESKRLVDTAMYATMQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 NLKKRGILSAAQLLSFSKLPEPTSGVIARAAEIMETSIQAMKRKVNLKTQQSQHPTDALS ::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NLKKRGILSPAQLLSFSKLPEPTSGVIARAAEIMETSIQAMKRKVNLKTQQSQHPTDALS 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 EDLLSIIANMSGCLPYMLPPKCPNTCLANKYRPITGACNNRKMKYKPDHSETAN ::::::::::::::::::::::::::::::::::::::::: XP_011 EDLLSIIANMSGCLPYMLPPKCPNTCLANKYRPITGACNNRDHPRWGASNTALARWLPPV 130 140 150 160 170 180 XP_011 YEDGFSQPRGWNPGFLYNGFPLPPVREVTRHVIQVSNEVVTDDDRYSDLLMAWGQYIDHD 190 200 210 220 230 240 >>NP_000241 (OMIM: 104300,254600,606989) myeloperoxidase (745 aa) initn: 219 init1: 114 opt: 232 Z-score: 270.6 bits: 58.6 E(85289): 2.5e-08 Smith-Waterman score: 232; 31.9% identity (60.2% similar) in 166 aa overlap (1-162:27-184) 10 20 30 pF1KE5 MRALAVLSVTLVMACTEAFFPFISRGKE-LLWGK :. : .:. :.. : : :.: . :. NP_000 MGVPFFSSLRCMVDLGPCWAGGLTAEMKLLLALAGLLAILAT----PQPSEGAAPAVLGE 10 20 30 40 50 40 50 60 70 80 90 pF1KE5 PEESRVSSVLEESKRLVDTAMYATMQRNLKKR---GILSAAQLLSFSKLPEPTSGVIARA . : : : .::.:.::: : : ....:.: : : .:::. : : .. . .:: NP_000 VDTSLVLSSMEEAKQLVDKA-YKERRESIKQRLRSGSASPMELLSYFKQPVAATRTAVRA 60 70 80 90 100 110 100 110 120 130 140 150 pF1KE5 AEIMETSIQAMKRKVNLKTQQSQHPTDALSEDLLSIIANMSGCLPYMLPPKCPNTCLANK :. ...... ..::. .. . ::.:. :..... ::: . ::. .: NP_000 ADYLHVALDLLERKLRSLWRRPFNVTDVLTPAQLNVLSKSSGCAYQDVGVTCPEQ---DK 120 130 140 150 160 170 160 170 pF1KE5 YRPITGACNNRKMKYKPDHSETAN :: ::: ::::. NP_000 YRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSN 180 190 200 210 220 230 174 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 23:38:18 2016 done: Mon Nov 7 23:38:19 2016 Total Scan time: 5.180 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]