FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6758, 583 aa 1>>>pF1KE6758 583 - 583 aa - 583 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.5001+/-0.000304; mu= 14.2183+/- 0.019 mean_var=110.3439+/-21.973, 0's: 0 Z-trim(118.6): 12 B-trim: 1565 in 1/59 Lambda= 0.122096 statistics sampled from 31688 (31700) to 31688 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.72), E-opt: 0.2 (0.372), width: 16 Scan time: 9.080 The best scores are: opt bits E(85289) NP_001159603 (OMIM: 610885) crossover junction end ( 583) 3867 692.0 1.4e-198 NP_689676 (OMIM: 610885) crossover junction endonu ( 570) 2476 447.0 8e-125 XP_016879725 (OMIM: 610885) PREDICTED: crossover j ( 541) 2036 369.5 1.6e-101 XP_011522697 (OMIM: 610885) PREDICTED: crossover j ( 247) 1326 244.2 3.9e-64 XP_005257138 (OMIM: 610885) PREDICTED: crossover j ( 413) 1326 244.3 5.9e-64 XP_016878515 (OMIM: 610886) PREDICTED: probable cr ( 348) 508 100.2 1.2e-20 XP_016878514 (OMIM: 610886) PREDICTED: probable cr ( 351) 508 100.2 1.2e-20 NP_001244299 (OMIM: 610886) probable crossover jun ( 379) 508 100.2 1.3e-20 >>NP_001159603 (OMIM: 610885) crossover junction endonuc (583 aa) initn: 3867 init1: 3867 opt: 3867 Z-score: 3686.1 bits: 692.0 E(85289): 1.4e-198 Smith-Waterman score: 3867; 99.8% identity (100.0% similar) in 583 aa overlap (1-583:1-583) 10 20 30 40 50 60 pF1KE6 MALKKSSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MALKKSSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 ELFSPPVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPVK ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ELFSPPVPEIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPVK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 SVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLSTCPGQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLSTCPGQS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 SSLAVTKTNSDILPPQKKTKPSQKVQGRGSHGCRQQRQARQKESTLRRQERKNAALVTRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SSLAVTKTNSDILPPQKKTKPSQKVQGRGSHGCRQQRQARQKESTLRRQERKNAALVTRM 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 KAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRRRAGPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRRRAGPS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 EDREDWVEEPTVLVLLRAEAFVSMIDNGKQGSLDSTMKGKETLQGFVTDITAKTAGKALS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EDREDWVEEPTVLVLLRAEAFVSMIDNGKQGSLDSTMKGKETLQGFVTDITAKTAGKALS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 LVIVDQEKCFSLELLFFDFLPCTSAQNPPRRGKQGANKQTKKQQQRQPEASIGSMVSRVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LVIVDQEKCFSLELLFFDFLPCTSAQNPPRRGKQGANKQTKKQQQRQPEASIGSMVSRVD 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE6 AEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAG 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE6 GVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLL 490 500 510 520 530 540 550 560 570 580 pF1KE6 ADIQVRRGEGVTSTSRRIGPELSRRIYLQMTTLQPHLSLDSAD ::::::::::::::::::::::::::::::::::::::::::: NP_001 ADIQVRRGEGVTSTSRRIGPELSRRIYLQMTTLQPHLSLDSAD 550 560 570 580 >>NP_689676 (OMIM: 610885) crossover junction endonuclea (570 aa) initn: 2476 init1: 2476 opt: 2476 Z-score: 2362.0 bits: 447.0 E(85289): 8e-125 Smith-Waterman score: 3740; 97.6% identity (97.8% similar) in 583 aa overlap (1-583:1-570) 10 20 30 40 50 60 pF1KE6 MALKKSSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 MALKKSSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 ELFSPPVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPVK ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 ELFSPPVPEIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPVK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 SVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLSTCPGQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 SVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLSTCPGQS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 SSLAVTKTNSDILPPQKKTKPSQKVQGRGSHGCRQQRQARQKESTLRRQERKNAALVTRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 SSLAVTKTNSDILPPQKKTKPSQKVQGRGSHGCRQQRQARQKESTLRRQERKNAALVTRM 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 KAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRRRAGPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 KAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRRRAGPS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 EDREDWVEEPTVLVLLRAEAFVSMIDNGKQGSLDSTMKGKETLQGFVTDITAKTAGKALS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 EDREDWVEEPTVLVLLRAEAFVSMIDNGKQGSLDSTMKGKETLQGFVTDITAKTAGKALS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 LVIVDQEKCFSLELLFFDFLPCTSAQNPPRRGKQGANKQTKKQQQRQPEASIGSMVSRVD ::::::::::: :::::::::::::::::::::::::::::::::::: NP_689 LVIVDQEKCFS-------------AQNPPRRGKQGANKQTKKQQQRQPEASIGSMVSRVD 370 380 390 400 430 440 450 460 470 480 pF1KE6 AEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 AEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAG 410 420 430 440 450 460 490 500 510 520 530 540 pF1KE6 GVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 GVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLL 470 480 490 500 510 520 550 560 570 580 pF1KE6 ADIQVRRGEGVTSTSRRIGPELSRRIYLQMTTLQPHLSLDSAD ::::::::::::::::::::::::::::::::::::::::::: NP_689 ADIQVRRGEGVTSTSRRIGPELSRRIYLQMTTLQPHLSLDSAD 530 540 550 560 570 >>XP_016879725 (OMIM: 610885) PREDICTED: crossover junct (541 aa) initn: 3335 init1: 2033 opt: 2036 Z-score: 1943.5 bits: 369.5 E(85289): 1.6e-101 Smith-Waterman score: 3482; 92.6% identity (92.8% similar) in 583 aa overlap (1-583:1-541) 10 20 30 40 50 60 pF1KE6 MALKKSSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MALKKSSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 ELFSPPVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPVK ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ELFSPPVPEIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPVK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 SVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLSTCPGQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLSTCPGQS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 SSLAVTKTNSDILPPQKKTKPSQKVQGRGSHGCRQQRQARQKESTLRRQERKNAALVTRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SSLAVTKTNSDILPPQKKTKPSQKVQGRGSHGCRQQRQARQKESTLRRQERKNAALVTRM 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 KAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRRRAGPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRRRAGPS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 EDREDWVEEPTVLVLLRAEAFVSMIDNGKQGSLDSTMKGKETLQGFVTDITAKTAGKALS : :::::::::::::::::::::::::::::: XP_016 E-----------------------------GSLDSTMKGKETLQGFVTDITAKTAGKALS 310 320 330 370 380 390 400 410 420 pF1KE6 LVIVDQEKCFSLELLFFDFLPCTSAQNPPRRGKQGANKQTKKQQQRQPEASIGSMVSRVD ::::::::::: :::::::::::::::::::::::::::::::::::: XP_016 LVIVDQEKCFS-------------AQNPPRRGKQGANKQTKKQQQRQPEASIGSMVSRVD 340 350 360 370 430 440 450 460 470 480 pF1KE6 AEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAG 380 390 400 410 420 430 490 500 510 520 530 540 pF1KE6 GVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLL 440 450 460 470 480 490 550 560 570 580 pF1KE6 ADIQVRRGEGVTSTSRRIGPELSRRIYLQMTTLQPHLSLDSAD ::::::::::::::::::::::::::::::::::::::::::: XP_016 ADIQVRRGEGVTSTSRRIGPELSRRIYLQMTTLQPHLSLDSAD 500 510 520 530 540 >>XP_011522697 (OMIM: 610885) PREDICTED: crossover junct (247 aa) initn: 1316 init1: 1316 opt: 1326 Z-score: 1272.4 bits: 244.2 E(85289): 3.9e-64 Smith-Waterman score: 1565; 95.0% identity (95.0% similar) in 260 aa overlap (324-583:1-247) 300 310 320 330 340 350 pF1KE6 RRRAGPSEDREDWVEEPTVLVLLRAEAFVSMIDNGKQGSLDSTMKGKETLQGFVTDITAK :::::::::::::::::::::::::::::: XP_011 MIDNGKQGSLDSTMKGKETLQGFVTDITAK 10 20 30 360 370 380 390 400 410 pF1KE6 TAGKALSLVIVDQEKCFSLELLFFDFLPCTSAQNPPRRGKQGANKQTKKQQQRQPEASIG :::::::::::::::::: ::::::::::::::::::::::::::::: XP_011 TAGKALSLVIVDQEKCFS-------------AQNPPRRGKQGANKQTKKQQQRQPEASIG 40 50 60 70 420 430 440 450 460 470 pF1KE6 SMVSRVDAEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SMVSRVDAEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFC 80 90 100 110 120 130 480 490 500 510 520 530 pF1KE6 LESDWAGGVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LESDWAGGVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSD 140 150 160 170 180 190 540 550 560 570 580 pF1KE6 KERQNLLADIQVRRGEGVTSTSRRIGPELSRRIYLQMTTLQPHLSLDSAD :::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KERQNLLADIQVRRGEGVTSTSRRIGPELSRRIYLQMTTLQPHLSLDSAD 200 210 220 230 240 >>XP_005257138 (OMIM: 610885) PREDICTED: crossover junct (413 aa) initn: 1953 init1: 1316 opt: 1326 Z-score: 1269.2 bits: 244.3 E(85289): 5.9e-64 Smith-Waterman score: 2328; 70.5% identity (70.8% similar) in 583 aa overlap (1-583:1-413) 10 20 30 40 50 60 pF1KE6 MALKKSSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MALKKSSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 ELFSPPVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPVK ::::::::.:::::::::::::::::::::::::::::::: XP_005 ELFSPPVPEIAETVTQTQPVRLLSSESEDEEEFIPLAQRLT------------------- 70 80 90 100 130 140 150 160 170 180 pF1KE6 SVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLSTCPGQS XP_005 ------------------------------------------------------------ 190 200 210 220 230 240 pF1KE6 SSLAVTKTNSDILPPQKKTKPSQKVQGRGSHGCRQQRQARQKESTLRRQERKNAALVTRM XP_005 ------------------------------------------------------------ 250 260 270 280 290 300 pF1KE6 KAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRRRAGPS .::::::::::::::::::::::::::::::::::::::::: XP_005 ------------------LLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRRRAGPS 110 120 130 140 310 320 330 340 350 360 pF1KE6 EDREDWVEEPTVLVLLRAEAFVSMIDNGKQGSLDSTMKGKETLQGFVTDITAKTAGKALS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 EDREDWVEEPTVLVLLRAEAFVSMIDNGKQGSLDSTMKGKETLQGFVTDITAKTAGKALS 150 160 170 180 190 200 370 380 390 400 410 420 pF1KE6 LVIVDQEKCFSLELLFFDFLPCTSAQNPPRRGKQGANKQTKKQQQRQPEASIGSMVSRVD ::::::::::: :::::::::::::::::::::::::::::::::::: XP_005 LVIVDQEKCFS-------------AQNPPRRGKQGANKQTKKQQQRQPEASIGSMVSRVD 210 220 230 240 250 430 440 450 460 470 480 pF1KE6 AEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 AEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAG 260 270 280 290 300 310 490 500 510 520 530 540 pF1KE6 GVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLL 320 330 340 350 360 370 550 560 570 580 pF1KE6 ADIQVRRGEGVTSTSRRIGPELSRRIYLQMTTLQPHLSLDSAD ::::::::::::::::::::::::::::::::::::::::::: XP_005 ADIQVRRGEGVTSTSRRIGPELSRRIYLQMTTLQPHLSLDSAD 380 390 400 410 >>XP_016878515 (OMIM: 610886) PREDICTED: probable crosso (348 aa) initn: 598 init1: 413 opt: 508 Z-score: 491.6 bits: 100.2 E(85289): 1.2e-20 Smith-Waterman score: 540; 33.5% identity (56.2% similar) in 388 aa overlap (194-580:28-345) 170 180 190 200 210 220 pF1KE6 DPCCQLPAYLSTCPGQSSSLAVTKTNSDILPPQKKTKPSQKVQGRGSHGCRQQRQARQKE :: . . :. .. :: . :: .. XP_016 MARVGPGRAGVSCQGRGRGRGGSGQRRPPTWEISDSDAEDSAGS-----EAAARARD 10 20 30 40 50 230 240 250 260 270 280 pF1KE6 STLRRQERKNAALVTRMKAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIE . ::. :: . :. :::. ::.. : .: ..:. :. :. ::... :.: :: XP_016 PA---GERRAAAEALRL--LRPEQVLKRLAVCVDTAILEDAGADVLMEALEALGCECRIE 60 70 80 90 100 290 300 310 320 330 340 pF1KE6 AQAVPCSVTWRRRAGPSEDREDWVEEPTVLVLLRAEAFVSMIDNGKQGSLDSTMKGKETL : :. : : :.: .: ...: XP_016 PQRPARSLRWTR-ASP---------DPC----------------------PRSISGPTHW 110 120 130 350 360 370 380 390 400 pF1KE6 QGFVTDITAKTAGKALSLVIVDQEKCFSLELLFFDFLPCTSAQNPPRRGKQGANKQTKKQ ... : :: :... .: .: ..: ... : : XP_016 VPWISPET--TARPHLAVIGLDA------------YL----------WSRQHVSRGT--Q 140 150 160 410 420 430 440 450 460 pF1KE6 QQRQPE-ASIGSMVSRVDAEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPFK : ..:. :. :: ..::::: ::: .. .. .: ::.::. .:: :::.:. :.: XP_016 QPESPKVAGAEVAVSWPEVEEALVLLQLWANLDVLLVASWQELSRHVCAVTKALAQYPLK 170 180 190 200 210 220 470 480 490 500 510 520 pF1KE6 KLRDETTFSFCLESDWAGGVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQL . :. .:::: . ::.: : : :: .:::::.:..::: .:.:::.:.:::.: XP_016 QYRESQAFSFCTAGRWAAGEPVARDGAGLQAAWRRQIRQFSRVSPAVADAVVTAFPSPRL 230 240 250 260 270 280 530 540 550 560 570 580 pF1KE6 LVQAYQQCFSDKERQNLLADIQVRRGEGVTSTSRRIGPELSRRIYLQMTTLQPHLSLDSA : :: . : ...::..::::. : .:: . ::.::.::::: : .:: .: : :: XP_016 LQQALEACSTERERMGLLADLPVPPSEG--GRPRRVGPDLSRRICLFLTTANPDLLLDLG 290 300 310 320 330 340 pF1KE6 D XP_016 S >>XP_016878514 (OMIM: 610886) PREDICTED: probable crosso (351 aa) initn: 528 init1: 413 opt: 508 Z-score: 491.5 bits: 100.2 E(85289): 1.2e-20 Smith-Waterman score: 546; 36.7% identity (60.2% similar) in 332 aa overlap (257-580:52-348) 230 240 250 260 270 280 pF1KE6 RRQERKNAALVTRMKAQRPEECLKHIIVVLDPV-LLQMEGGGQLLGALQTMECRCVIEAQ ::. .:. :. :. ::... :.: :: : XP_016 GSGQRRPPTWEISDSDAEDSAGSEAAARARDPAAILEDAGADVLMEALEALGCECRIEPQ 30 40 50 60 70 80 290 300 310 320 330 pF1KE6 AVPCSVTWRRRAGP-----SEDREDWVE-EPTVLVLLRAEAFVSMIDNGKQGSLDSTMKG :. : : :.: : : :. : .:.::. : :.. . . : ..: XP_016 RPARSLRWTR-ASPDPCPRSLPPEVWAAGEQELLLLLEPEEFLQGVATLTQ------ISG 90 100 110 120 130 340 350 360 370 380 390 pF1KE6 KETLQGFVTDITAKTAGKALSLVIVDQEKCFSLELLFFDFLPCTSAQNPPRRGKQGANKQ ... : :: :... .: .: ..: ... XP_016 PTHWVPWISPET--TARPHLAVIGLDA------------YL----------WSRQHVSRG 140 150 160 170 400 410 420 430 440 450 pF1KE6 TKKQQQRQPE-ASIGSMVSRVDAEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAE : :: ..:. :. :: ..::::: ::: .. .. .: ::.::. .:: :::.:. XP_016 T--QQPESPKVAGAEVAVSWPEVEEALVLLQLWANLDVLLVASWQELSRHVCAVTKALAQ 180 190 200 210 220 460 470 480 490 500 510 pF1KE6 APFKKLRDETTFSFCLESDWAGGVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYP :.:. :. .:::: . ::.: : : :: .:::::.:..::: .:.:::.:.: XP_016 YPLKQYRESQAFSFCTAGRWAAGEPVARDGAGLQAAWRRQIRQFSRVSPAVADAVVTAFP 230 240 250 260 270 280 520 530 540 550 560 570 pF1KE6 SPQLLVQAYQQCFSDKERQNLLADIQVRRGEGVTSTSRRIGPELSRRIYLQMTTLQPHLS ::.:: :: . : ...::..::::. : .:: . ::.::.::::: : .:: .: : XP_016 SPRLLQQALEACSTERERMGLLADLPVPPSEG--GRPRRVGPDLSRRICLFLTTANPDLL 290 300 310 320 330 340 580 pF1KE6 LDSAD :: XP_016 LDLGS 350 >>NP_001244299 (OMIM: 610886) probable crossover junctio (379 aa) initn: 598 init1: 413 opt: 508 Z-score: 491.0 bits: 100.2 E(85289): 1.3e-20 Smith-Waterman score: 606; 35.3% identity (59.1% similar) in 394 aa overlap (194-580:28-376) 170 180 190 200 210 220 pF1KE6 DPCCQLPAYLSTCPGQSSSLAVTKTNSDILPPQKKTKPSQKVQGRGSHGCRQQRQARQKE :: . . :. .. :: . :: .. NP_001 MARVGPGRAGVSCQGRGRGRGGSGQRRPPTWEISDSDAEDSAGS-----EAAARARD 10 20 30 40 50 230 240 250 260 270 280 pF1KE6 STLRRQERKNAALVTRMKAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIE . ::. :: . :. :::. ::.. : .: ..:. :. :. ::... :.: :: NP_001 PA---GERRAAAEALRL--LRPEQVLKRLAVCVDTAILEDAGADVLMEALEALGCECRIE 60 70 80 90 100 290 300 310 320 330 pF1KE6 AQAVPCSVTWRRRAGP-----SEDREDWVE-EPTVLVLLRAEAFVSMIDNGKQGSLDSTM : :. : : :.: : : :. : .:.::. : :.. . . : . NP_001 PQRPARSLRWTR-ASPDPCPRSLPPEVWAAGEQELLLLLEPEEFLQGVATLTQ------I 110 120 130 140 150 160 340 350 360 370 380 390 pF1KE6 KGKETLQGFVTDITAKTAGKALSLVIVDQEKCFSLELLFFDFLPCTSAQNPPRRGKQGAN .: ... : :: :... .: .: ..: .. NP_001 SGPTHWVPWISPET--TARPHLAVIGLDA------------YL----------WSRQHVS 170 180 190 400 410 420 430 440 450 pF1KE6 KQTKKQQQRQPE-ASIGSMVSRVDAEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAV . : :: ..:. :. :: ..::::: ::: .. .. .: ::.::. .:: :::. NP_001 RGT--QQPESPKVAGAEVAVSWPEVEEALVLLQLWANLDVLLVASWQELSRHVCAVTKAL 200 210 220 230 240 250 460 470 480 490 500 510 pF1KE6 AEAPFKKLRDETTFSFCLESDWAGGVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNA :. :.:. :. .:::: . ::.: : : :: .:::::.:..::: .:.:::.: NP_001 AQYPLKQYRESQAFSFCTAGRWAAGEPVARDGAGLQAAWRRQIRQFSRVSPAVADAVVTA 260 270 280 290 300 310 520 530 540 550 560 570 pF1KE6 YPSPQLLVQAYQQCFSDKERQNLLADIQVRRGEGVTSTSRRIGPELSRRIYLQMTTLQPH .:::.:: :: . : ...::..::::. : .:: . ::.::.::::: : .:: .: NP_001 FPSPRLLQQALEACSTERERMGLLADLPVPPSEG--GRPRRVGPDLSRRICLFLTTANPD 320 330 340 350 360 370 580 pF1KE6 LSLDSAD : :: NP_001 LLLDLGS 583 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 16:05:52 2016 done: Tue Nov 8 16:05:53 2016 Total Scan time: 9.080 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]