FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6758, 583 aa 1>>>pF1KE6758 583 - 583 aa - 583 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.5263+/-0.000756; mu= 13.8596+/- 0.045 mean_var=100.1070+/-19.927, 0's: 0 Z-trim(111.2): 16 B-trim: 514 in 2/52 Lambda= 0.128186 statistics sampled from 12221 (12230) to 12221 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.731), E-opt: 0.2 (0.376), width: 16 Scan time: 3.270 The best scores are: opt bits E(32554) CCDS54141.1 EME1 gene_id:146956|Hs108|chr17 ( 583) 3867 725.5 4.4e-209 CCDS11565.1 EME1 gene_id:146956|Hs108|chr17 ( 570) 2476 468.3 1.2e-131 CCDS58404.1 EME2 gene_id:197342|Hs108|chr16 ( 379) 508 104.2 3.1e-22 >>CCDS54141.1 EME1 gene_id:146956|Hs108|chr17 (583 aa) initn: 3867 init1: 3867 opt: 3867 Z-score: 3867.2 bits: 725.5 E(32554): 4.4e-209 Smith-Waterman score: 3867; 99.8% identity (100.0% similar) in 583 aa overlap (1-583:1-583) 10 20 30 40 50 60 pF1KE6 MALKKSSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 MALKKSSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 ELFSPPVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPVK ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 ELFSPPVPEIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPVK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 SVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLSTCPGQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 SVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLSTCPGQS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 SSLAVTKTNSDILPPQKKTKPSQKVQGRGSHGCRQQRQARQKESTLRRQERKNAALVTRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 SSLAVTKTNSDILPPQKKTKPSQKVQGRGSHGCRQQRQARQKESTLRRQERKNAALVTRM 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 KAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRRRAGPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 KAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRRRAGPS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 EDREDWVEEPTVLVLLRAEAFVSMIDNGKQGSLDSTMKGKETLQGFVTDITAKTAGKALS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 EDREDWVEEPTVLVLLRAEAFVSMIDNGKQGSLDSTMKGKETLQGFVTDITAKTAGKALS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 LVIVDQEKCFSLELLFFDFLPCTSAQNPPRRGKQGANKQTKKQQQRQPEASIGSMVSRVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 LVIVDQEKCFSLELLFFDFLPCTSAQNPPRRGKQGANKQTKKQQQRQPEASIGSMVSRVD 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE6 AEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 AEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAG 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE6 GVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 GVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLL 490 500 510 520 530 540 550 560 570 580 pF1KE6 ADIQVRRGEGVTSTSRRIGPELSRRIYLQMTTLQPHLSLDSAD ::::::::::::::::::::::::::::::::::::::::::: CCDS54 ADIQVRRGEGVTSTSRRIGPELSRRIYLQMTTLQPHLSLDSAD 550 560 570 580 >>CCDS11565.1 EME1 gene_id:146956|Hs108|chr17 (570 aa) initn: 2476 init1: 2476 opt: 2476 Z-score: 2477.1 bits: 468.3 E(32554): 1.2e-131 Smith-Waterman score: 3740; 97.6% identity (97.8% similar) in 583 aa overlap (1-583:1-570) 10 20 30 40 50 60 pF1KE6 MALKKSSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MALKKSSPSLDSGDSDSEELPTFAFLKKEPSSTKRRQPEREEKIVVVDISDCEASCPPAP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 ELFSPPVPDIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPVK ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 ELFSPPVPEIAETVTQTQPVRLLSSESEDEEEFIPLAQRLTCKFLTHKQLSPEDSSSPVK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 SVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLSTCPGQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 SVLDHQNNEGASCDWKKPFPKIPEVPLHDTPERSAADNKDLILDPCCQLPAYLSTCPGQS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 SSLAVTKTNSDILPPQKKTKPSQKVQGRGSHGCRQQRQARQKESTLRRQERKNAALVTRM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 SSLAVTKTNSDILPPQKKTKPSQKVQGRGSHGCRQQRQARQKESTLRRQERKNAALVTRM 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 KAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRRRAGPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 KAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRRRAGPS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 EDREDWVEEPTVLVLLRAEAFVSMIDNGKQGSLDSTMKGKETLQGFVTDITAKTAGKALS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 EDREDWVEEPTVLVLLRAEAFVSMIDNGKQGSLDSTMKGKETLQGFVTDITAKTAGKALS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 LVIVDQEKCFSLELLFFDFLPCTSAQNPPRRGKQGANKQTKKQQQRQPEASIGSMVSRVD ::::::::::: :::::::::::::::::::::::::::::::::::: CCDS11 LVIVDQEKCFS-------------AQNPPRRGKQGANKQTKKQQQRQPEASIGSMVSRVD 370 380 390 400 430 440 450 460 470 480 pF1KE6 AEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 AEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAG 410 420 430 440 450 460 490 500 510 520 530 540 pF1KE6 GVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 GVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLL 470 480 490 500 510 520 550 560 570 580 pF1KE6 ADIQVRRGEGVTSTSRRIGPELSRRIYLQMTTLQPHLSLDSAD ::::::::::::::::::::::::::::::::::::::::::: CCDS11 ADIQVRRGEGVTSTSRRIGPELSRRIYLQMTTLQPHLSLDSAD 530 540 550 560 570 >>CCDS58404.1 EME2 gene_id:197342|Hs108|chr16 (379 aa) initn: 598 init1: 413 opt: 508 Z-score: 512.8 bits: 104.2 E(32554): 3.1e-22 Smith-Waterman score: 606; 35.3% identity (59.1% similar) in 394 aa overlap (194-580:28-376) 170 180 190 200 210 220 pF1KE6 DPCCQLPAYLSTCPGQSSSLAVTKTNSDILPPQKKTKPSQKVQGRGSHGCRQQRQARQKE :: . . :. .. :: . :: .. CCDS58 MARVGPGRAGVSCQGRGRGRGGSGQRRPPTWEISDSDAEDSAGS-----EAAARARD 10 20 30 40 50 230 240 250 260 270 280 pF1KE6 STLRRQERKNAALVTRMKAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIE . ::. :: . :. :::. ::.. : .: ..:. :. :. ::... :.: :: CCDS58 PA---GERRAAAEALRL--LRPEQVLKRLAVCVDTAILEDAGADVLMEALEALGCECRIE 60 70 80 90 100 290 300 310 320 330 pF1KE6 AQAVPCSVTWRRRAGP-----SEDREDWVE-EPTVLVLLRAEAFVSMIDNGKQGSLDSTM : :. : : :.: : : :. : .:.::. : :.. . . : . CCDS58 PQRPARSLRWTR-ASPDPCPRSLPPEVWAAGEQELLLLLEPEEFLQGVATLTQ------I 110 120 130 140 150 160 340 350 360 370 380 390 pF1KE6 KGKETLQGFVTDITAKTAGKALSLVIVDQEKCFSLELLFFDFLPCTSAQNPPRRGKQGAN .: ... : :: :... .: .: ..: .. CCDS58 SGPTHWVPWISPET--TARPHLAVIGLDA------------YL----------WSRQHVS 170 180 190 400 410 420 430 440 450 pF1KE6 KQTKKQQQRQPE-ASIGSMVSRVDAEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAV . : :: ..:. :. :: ..::::: ::: .. .. .: ::.::. .:: :::. CCDS58 RGT--QQPESPKVAGAEVAVSWPEVEEALVLLQLWANLDVLLVASWQELSRHVCAVTKAL 200 210 220 230 240 250 460 470 480 490 500 510 pF1KE6 AEAPFKKLRDETTFSFCLESDWAGGVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNA :. :.:. :. .:::: . ::.: : : :: .:::::.:..::: .:.:::.: CCDS58 AQYPLKQYRESQAFSFCTAGRWAAGEPVARDGAGLQAAWRRQIRQFSRVSPAVADAVVTA 260 270 280 290 300 310 520 530 540 550 560 570 pF1KE6 YPSPQLLVQAYQQCFSDKERQNLLADIQVRRGEGVTSTSRRIGPELSRRIYLQMTTLQPH .:::.:: :: . : ...::..::::. : .:: . ::.::.::::: : .:: .: CCDS58 FPSPRLLQQALEACSTERERMGLLADLPVPPSEG--GRPRRVGPDLSRRICLFLTTANPD 320 330 340 350 360 370 580 pF1KE6 LSLDSAD : :: CCDS58 LLLDLGS 583 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 16:05:51 2016 done: Tue Nov 8 16:05:52 2016 Total Scan time: 3.270 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]