Result of FASTA (omim) for
pFN21AE5454
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5454, 353 aa
1>>>pF1KE5454 353 - 353 aa - 353 aa
Library: /omim/omim.rfq.tfa
64092750 residues in 91774 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1574+/-0.000366; mu= 16.8465+/- 0.023
mean_var=71.0436+/-14.486, 0's: 0 Z-trim(113.0): 143 B-trim: 205 in 1/49
Lambda= 0.152164
statistics sampled from 22878 (23031) to 22878 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.623), E-opt: 0.2 (0.251), width: 16
Scan time: 3.670
The best scores are: opt bits E(91774)
XP_016866271 (OMIM: 138244,611092) glutamate recep ( 601) 2090 468.4 2e-131
XP_016866270 (OMIM: 138244,611092) glutamate recep ( 707) 2090 468.4 2.2e-131
NP_786944 (OMIM: 138244,611092) glutamate receptor ( 869) 2090 468.5 2.6e-131
XP_024302179 (OMIM: 138244,611092) glutamate recep ( 869) 2090 468.5 2.6e-131
NP_001159719 (OMIM: 138244,611092) glutamate recep ( 892) 2090 468.5 2.7e-131
XP_024302178 (OMIM: 138244,611092) glutamate recep ( 892) 2090 468.5 2.7e-131
XP_011534079 (OMIM: 138244,611092) glutamate recep ( 892) 2090 468.5 2.7e-131
XP_005267002 (OMIM: 138244,611092) glutamate recep ( 908) 2090 468.5 2.7e-131
NP_068775 (OMIM: 138244,611092) glutamate receptor ( 908) 2090 468.5 2.7e-131
XP_005267003 (OMIM: 138244,611092) glutamate recep ( 859) 1758 395.6 2.2e-109
NP_001307559 (OMIM: 138245) glutamate receptor ion ( 410) 1538 347.1 4.3e-95
XP_005261001 (OMIM: 138245) glutamate receptor ion ( 903) 1538 347.3 8.1e-95
NP_783300 (OMIM: 138245) glutamate receptor ionotr ( 905) 1538 347.3 8.1e-95
NP_000821 (OMIM: 138245) glutamate receptor ionotr ( 918) 1538 347.3 8.2e-95
NP_001307545 (OMIM: 138245) glutamate receptor ion ( 920) 1538 347.3 8.2e-95
NP_001317922 (OMIM: 138245) glutamate receptor ion ( 934) 1538 347.3 8.3e-95
NP_001317923 (OMIM: 138245) glutamate receptor ion ( 949) 1538 347.4 8.4e-95
NP_000822 (OMIM: 138243) glutamate receptor ionotr ( 919) 1535 346.7 1.3e-94
NP_001307547 (OMIM: 138245) glutamate receptor ion ( 781) 1233 280.3 1e-74
NP_001307550 (OMIM: 138245) glutamate receptor ion ( 763) 767 178.0 6.3e-44
NP_000819 (OMIM: 300699,305915) glutamate receptor ( 894) 436 105.4 5.4e-22
NP_015564 (OMIM: 300699,305915) glutamate receptor ( 894) 436 105.4 5.4e-22
NP_000817 (OMIM: 138247) glutamate receptor 2 isof ( 883) 400 97.5 1.3e-19
NP_001077088 (OMIM: 138247) glutamate receptor 2 i ( 883) 400 97.5 1.3e-19
NP_001077089 (OMIM: 138247) glutamate receptor 2 i ( 836) 391 95.5 4.8e-19
XP_016864881 (OMIM: 138248) glutamate receptor 1 i ( 846) 377 92.4 4.1e-18
NP_001351094 (OMIM: 138248) glutamate receptor 1 i ( 850) 377 92.4 4.1e-18
NP_001107655 (OMIM: 138248) glutamate receptor 1 i ( 906) 377 92.5 4.3e-18
NP_000818 (OMIM: 138248) glutamate receptor 1 isof ( 906) 377 92.5 4.3e-18
NP_001351095 (OMIM: 138248) glutamate receptor 1 i ( 915) 377 92.5 4.3e-18
NP_001244950 (OMIM: 138248) glutamate receptor 1 i ( 916) 377 92.5 4.3e-18
NP_001244951 (OMIM: 138248) glutamate receptor 1 i ( 916) 377 92.5 4.3e-18
XP_024304223 (OMIM: 138246,617864) glutamate recep ( 425) 367 90.0 1.1e-17
NP_001269402 (OMIM: 600282) glutamate receptor ion ( 765) 370 90.9 1.1e-17
XP_024304222 (OMIM: 138246,617864) glutamate recep ( 433) 367 90.0 1.1e-17
NP_001106283 (OMIM: 138246,617864) glutamate recep ( 433) 367 90.0 1.1e-17
NP_001070712 (OMIM: 138246,617864) glutamate recep ( 433) 367 90.0 1.1e-17
XP_016873111 (OMIM: 600282) glutamate receptor ion ( 888) 370 90.9 1.2e-17
XP_016873110 (OMIM: 600282) glutamate receptor ion ( 898) 370 90.9 1.2e-17
NP_055434 (OMIM: 600282) glutamate receptor ionotr ( 956) 370 90.9 1.3e-17
NP_001269399 (OMIM: 600282) glutamate receptor ion ( 956) 370 90.9 1.3e-17
XP_016873099 (OMIM: 138246,617864) glutamate recep ( 771) 367 90.2 1.7e-17
XP_016873098 (OMIM: 138246,617864) glutamate recep ( 814) 367 90.2 1.8e-17
NP_001070711 (OMIM: 138246,617864) glutamate recep ( 884) 367 90.3 1.9e-17
XP_011541077 (OMIM: 138246,617864) glutamate recep ( 884) 367 90.3 1.9e-17
NP_000820 (OMIM: 138246,617864) glutamate receptor ( 902) 367 90.3 2e-17
XP_005271575 (OMIM: 138246,617864) glutamate recep ( 902) 367 90.3 2e-17
XP_006718886 (OMIM: 138246,617864) glutamate recep ( 902) 367 90.3 2e-17
XP_011525173 (OMIM: 600283) glutamate receptor ion ( 496) 361 88.8 3e-17
XP_011525172 (OMIM: 600283) glutamate receptor ion ( 622) 361 88.8 3.6e-17
>>XP_016866271 (OMIM: 138244,611092) glutamate receptor (601 aa)
initn: 2090 init1: 2090 opt: 2090 Z-score: 2481.3 bits: 468.4 E(91774): 2e-131
Smith-Waterman score: 2090; 99.4% identity (99.7% similar) in 319 aa overlap (1-319:1-319)
10 20 30 40 50 60
pF1KE5 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
250 260 270 280 290 300
310 320 330 340 350
pF1KE5 LQAPPKPDSGLLDGFMTMEFHSCCPGWSAMARSHLTATSASWVQAILLPQPPE
::::::::::::::::: .
XP_016 LQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFM
310 320 330 340 350 360
>>XP_016866270 (OMIM: 138244,611092) glutamate receptor (707 aa)
initn: 2090 init1: 2090 opt: 2090 Z-score: 2480.3 bits: 468.4 E(91774): 2.2e-131
Smith-Waterman score: 2090; 99.4% identity (99.7% similar) in 319 aa overlap (1-319:1-319)
10 20 30 40 50 60
pF1KE5 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
250 260 270 280 290 300
310 320 330 340 350
pF1KE5 LQAPPKPDSGLLDGFMTMEFHSCCPGWSAMARSHLTATSASWVQAILLPQPPE
::::::::::::::::: .
XP_016 LQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFM
310 320 330 340 350 360
>>NP_786944 (OMIM: 138244,611092) glutamate receptor ion (869 aa)
initn: 2090 init1: 2090 opt: 2090 Z-score: 2479.0 bits: 468.5 E(91774): 2.6e-131
Smith-Waterman score: 2090; 99.4% identity (99.7% similar) in 319 aa overlap (1-319:1-319)
10 20 30 40 50 60
pF1KE5 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_786 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_786 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_786 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_786 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_786 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
250 260 270 280 290 300
310 320 330 340 350
pF1KE5 LQAPPKPDSGLLDGFMTMEFHSCCPGWSAMARSHLTATSASWVQAILLPQPPE
::::::::::::::::: .
NP_786 LQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFM
310 320 330 340 350 360
>>XP_024302179 (OMIM: 138244,611092) glutamate receptor (869 aa)
initn: 2090 init1: 2090 opt: 2090 Z-score: 2479.0 bits: 468.5 E(91774): 2.6e-131
Smith-Waterman score: 2090; 99.4% identity (99.7% similar) in 319 aa overlap (1-319:1-319)
10 20 30 40 50 60
pF1KE5 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
250 260 270 280 290 300
310 320 330 340 350
pF1KE5 LQAPPKPDSGLLDGFMTMEFHSCCPGWSAMARSHLTATSASWVQAILLPQPPE
::::::::::::::::: .
XP_024 LQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFM
310 320 330 340 350 360
>>NP_001159719 (OMIM: 138244,611092) glutamate receptor (892 aa)
initn: 2090 init1: 2090 opt: 2090 Z-score: 2478.8 bits: 468.5 E(91774): 2.7e-131
Smith-Waterman score: 2090; 99.4% identity (99.7% similar) in 319 aa overlap (1-319:1-319)
10 20 30 40 50 60
pF1KE5 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
250 260 270 280 290 300
310 320 330 340 350
pF1KE5 LQAPPKPDSGLLDGFMTMEFHSCCPGWSAMARSHLTATSASWVQAILLPQPPE
::::::::::::::::: .
NP_001 LQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFM
310 320 330 340 350 360
>>XP_024302178 (OMIM: 138244,611092) glutamate receptor (892 aa)
initn: 2090 init1: 2090 opt: 2090 Z-score: 2478.8 bits: 468.5 E(91774): 2.7e-131
Smith-Waterman score: 2090; 99.4% identity (99.7% similar) in 319 aa overlap (1-319:1-319)
10 20 30 40 50 60
pF1KE5 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_024 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
250 260 270 280 290 300
310 320 330 340 350
pF1KE5 LQAPPKPDSGLLDGFMTMEFHSCCPGWSAMARSHLTATSASWVQAILLPQPPE
::::::::::::::::: .
XP_024 LQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFM
310 320 330 340 350 360
>>XP_011534079 (OMIM: 138244,611092) glutamate receptor (892 aa)
initn: 2090 init1: 2090 opt: 2090 Z-score: 2478.8 bits: 468.5 E(91774): 2.7e-131
Smith-Waterman score: 2090; 99.4% identity (99.7% similar) in 319 aa overlap (1-319:1-319)
10 20 30 40 50 60
pF1KE5 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
250 260 270 280 290 300
310 320 330 340 350
pF1KE5 LQAPPKPDSGLLDGFMTMEFHSCCPGWSAMARSHLTATSASWVQAILLPQPPE
::::::::::::::::: .
XP_011 LQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFM
310 320 330 340 350 360
>>XP_005267002 (OMIM: 138244,611092) glutamate receptor (908 aa)
initn: 2090 init1: 2090 opt: 2090 Z-score: 2478.7 bits: 468.5 E(91774): 2.7e-131
Smith-Waterman score: 2090; 99.4% identity (99.7% similar) in 319 aa overlap (1-319:1-319)
10 20 30 40 50 60
pF1KE5 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
250 260 270 280 290 300
310 320 330 340 350
pF1KE5 LQAPPKPDSGLLDGFMTMEFHSCCPGWSAMARSHLTATSASWVQAILLPQPPE
::::::::::::::::: .
XP_005 LQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFM
310 320 330 340 350 360
>>NP_068775 (OMIM: 138244,611092) glutamate receptor ion (908 aa)
initn: 2090 init1: 2090 opt: 2090 Z-score: 2478.7 bits: 468.5 E(91774): 2.7e-131
Smith-Waterman score: 2090; 99.4% identity (99.7% similar) in 319 aa overlap (1-319:1-319)
10 20 30 40 50 60
pF1KE5 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 MKIIFPILSNPVFRRTVKLLLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 VNTINRNRTLLPNTTLTYDTQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 ICNALGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDST
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 GLIRLQELIKAPSRYNLRLKIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_068 QALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMER
250 260 270 280 290 300
310 320 330 340 350
pF1KE5 LQAPPKPDSGLLDGFMTMEFHSCCPGWSAMARSHLTATSASWVQAILLPQPPE
::::::::::::::::: .
NP_068 LQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFM
310 320 330 340 350 360
>>XP_005267003 (OMIM: 138244,611092) glutamate receptor (859 aa)
initn: 1758 init1: 1758 opt: 1758 Z-score: 2085.2 bits: 395.6 E(91774): 2.2e-109
Smith-Waterman score: 1758; 99.3% identity (99.6% similar) in 270 aa overlap (50-319:1-270)
20 30 40 50 60 70
pF1KE5 LLCLLWIGYSQGTTHVLRFGGIFEYVESGPMGAEELAFRFAVNTINRNRTLLPNTTLTYD
::::::::::::::::::::::::::::::
XP_005 MGAEELAFRFAVNTINRNRTLLPNTTLTYD
10 20 30
80 90 100 110 120 130
pF1KE5 TQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TQKINLYDSFEASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQVS
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE5 DNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRL
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE5 KIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KIRQLPADTKDAKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTL
160 170 180 190 200 210
260 270 280 290 300 310
pF1KE5 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTME
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: .
XP_005 DLFALDVEPYRYSGVNMTGFRILNTENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTD
220 230 240 250 260 270
320 330 340 350
pF1KE5 FHSCCPGWSAMARSHLTATSASWVQAILLPQPPE
XP_005 AALMYDAVHVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNK
280 290 300 310 320 330
353 residues in 1 query sequences
64092750 residues in 91774 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Jul 16 16:01:37 2019 done: Tue Jul 16 16:01:38 2019
Total Scan time: 3.670 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]