FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6786, 629 aa 1>>>pF1KE6786 629 - 629 aa - 629 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.4617+/-0.00037; mu= 10.3572+/- 0.023 mean_var=132.8836+/-26.482, 0's: 0 Z-trim(117.0): 5 B-trim: 336 in 1/55 Lambda= 0.111260 statistics sampled from 28669 (28674) to 28669 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.69), E-opt: 0.2 (0.336), width: 16 Scan time: 9.960 The best scores are: opt bits E(85289) NP_001155048 (OMIM: 610747) protein Smaug homolog ( 630) 4204 686.4 7.9e-197 NP_056404 (OMIM: 610747) protein Smaug homolog 1 i ( 718) 2605 429.8 1.6e-119 NP_001155049 (OMIM: 610747) protein Smaug homolog ( 345) 1837 306.3 1.1e-82 >>NP_001155048 (OMIM: 610747) protein Smaug homolog 1 is (630 aa) initn: 4204 init1: 4204 opt: 4204 Z-score: 3654.7 bits: 686.4 E(85289): 7.9e-197 Smith-Waterman score: 4204; 100.0% identity (100.0% similar) in 629 aa overlap (1-629:2-630) 10 20 30 40 50 pF1KE6 MFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCAELHVLER ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCAELHVLER 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE6 EANSPGIINQWQQESKDKVISLLLTHLPLLKPGNLDAKVEYMKLLPKILAHSIEHNQHIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EANSPGIINQWQQESKDKVISLLLTHLPLLKPGNLDAKVEYMKLLPKILAHSIEHNQHIE 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE6 ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSTSFGGQNRGRSDSVDYGQTHYYHQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSTSFGGQNRGRSDSVDYGQTHYYHQR 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE6 QNSDDKLNGWQNSRDSGICINASNWQDKSMGCENGHVPLYSSSSVPTTINTIGTSTSTNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QNSDDKLNGWQNSRDSGICINASNWQDKSMGCENGHVPLYSSSSVPTTINTIGTSTSTNV 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE6 PAWLKSLRLHKYAALFSQMTYEEMMALTECQLEAQNVTKGARHKIVISIQKLKERQNLLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PAWLKSLRLHKYAALFSQMTYEEMMALTECQLEAQNVTKGARHKIVISIQKLKERQNLLK 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE6 SLERDIIEGGSLRIPLQELHQMILTPIKAYSSPSTTPEARRREPQAPRQPSLMGPESQSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SLERDIIEGGSLRIPLQELHQMILTPIKAYSSPSTTPEARRREPQAPRQPSLMGPESQSP 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE6 DCKDGAAATGATATPSAGASGGLQPHQLSSCDGELAVAPLPEGDLPGQFTRVMGKVCTQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DCKDGAAATGATATPSAGASGGLQPHQLSSCDGELAVAPLPEGDLPGQFTRVMGKVCTQL 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE6 LVSRPDEENISSYLQLIDKCLIHEAFTETQKKRLLSWKQQVQKLFRSFPRKTLLDISGYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LVSRPDEENISSYLQLIDKCLIHEAFTETQKKRLLSWKQQVQKLFRSFPRKTLLDISGYR 430 440 450 460 470 480 480 490 500 510 520 530 pF1KE6 QQRNRGFGQSNSLPTAGSVGGGMGRRNPRQYQIPSRNVPSARLGLLGTSGFVSSNQRNTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QQRNRGFGQSNSLPTAGSVGGGMGRRNPRQYQIPSRNVPSARLGLLGTSGFVSSNQRNTT 490 500 510 520 530 540 540 550 560 570 580 590 pF1KE6 ATPTIMKQGRQNLWFANPGGSNSMPSRTHSSVQRTRSLPVHTSPQNMLMFQQPEFQLPVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ATPTIMKQGRQNLWFANPGGSNSMPSRTHSSVQRTRSLPVHTSPQNMLMFQQPEFQLPVT 550 560 570 580 590 600 600 610 620 pF1KE6 EPDINNRLESLCLSMTEHALGDGVDRTSTI :::::::::::::::::::::::::::::: NP_001 EPDINNRLESLCLSMTEHALGDGVDRTSTI 610 620 630 >>NP_056404 (OMIM: 610747) protein Smaug homolog 1 isofo (718 aa) initn: 2602 init1: 2602 opt: 2605 Z-score: 2266.8 bits: 429.8 E(85289): 1.6e-119 Smith-Waterman score: 3629; 86.5% identity (86.7% similar) in 661 aa overlap (57-629:58-718) 30 40 50 60 70 80 pF1KE6 SLLKRVSQTQARFLQLCLEHSLADCAELHVLEREANSPGIINQWQQESKDKVISLLLTHL :::::::::::::::::::::::::::::: NP_056 SLLKRVSQTQARFLQLCLEHSLADCAELHVLEREANSPGIINQWQQESKDKVISLLLTHL 30 40 50 60 70 80 90 100 110 120 130 140 pF1KE6 PLLKPGNLDAKVEYMKLLPKILAHSIEHNQHIEESRQLLSYALIHPATSLEDRSALAMWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 PLLKPGNLDAKVEYMKLLPKILAHSIEHNQHIEESRQLLSYALIHPATSLEDRSALAMWL 90 100 110 120 130 140 150 160 170 180 190 200 pF1KE6 NHLEDRTSTSFGGQNRGRSDSVDYGQTHYYHQRQNSDDKLNGWQNSRDSGICINASNWQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 NHLEDRTSTSFGGQNRGRSDSVDYGQTHYYHQRQNSDDKLNGWQNSRDSGICINASNWQD 150 160 170 180 190 200 210 220 230 pF1KE6 KSMGCENGHVPLYSSSSVPTTINTIGTSTST----------------------------- ::::::::::::::::::::::::::::::: NP_056 KSMGCENGHVPLYSSSSVPTTINTIGTSTSTILSGQAHHSPLKRSVSLTPPMNVPNQPLG 210 220 230 240 250 260 pF1KE6 -----------------------------------------------------------N . NP_056 HGWMSHEDLRARGPQCLPSDHAPLSPQSSVASSGSGGSEHLEDQTTARNTFQEEGSGMKD 270 280 290 300 310 320 240 250 260 270 280 290 pF1KE6 VPAWLKSLRLHKYAALFSQMTYEEMMALTECQLEAQNVTKGARHKIVISIQKLKERQNLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 VPAWLKSLRLHKYAALFSQMTYEEMMALTECQLEAQNVTKGARHKIVISIQKLKERQNLL 330 340 350 360 370 380 300 310 320 330 340 350 pF1KE6 KSLERDIIEGGSLRIPLQELHQMILTPIKAYSSPSTTPEARRREPQAPRQPSLMGPESQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 KSLERDIIEGGSLRIPLQELHQMILTPIKAYSSPSTTPEARRREPQAPRQPSLMGPESQS 390 400 410 420 430 440 360 370 380 390 400 410 pF1KE6 PDCKDGAAATGATATPSAGASGGLQPHQLSSCDGELAVAPLPEGDLPGQFTRVMGKVCTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 PDCKDGAAATGATATPSAGASGGLQPHQLSSCDGELAVAPLPEGDLPGQFTRVMGKVCTQ 450 460 470 480 490 500 420 430 440 450 460 470 pF1KE6 LLVSRPDEENISSYLQLIDKCLIHEAFTETQKKRLLSWKQQVQKLFRSFPRKTLLDISGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 LLVSRPDEENISSYLQLIDKCLIHEAFTETQKKRLLSWKQQVQKLFRSFPRKTLLDISGY 510 520 530 540 550 560 480 490 500 510 520 530 pF1KE6 RQQRNRGFGQSNSLPTAGSVGGGMGRRNPRQYQIPSRNVPSARLGLLGTSGFVSSNQRNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 RQQRNRGFGQSNSLPTAGSVGGGMGRRNPRQYQIPSRNVPSARLGLLGTSGFVSSNQRNT 570 580 590 600 610 620 540 550 560 570 580 590 pF1KE6 TATPTIMKQGRQNLWFANPGGSNSMPSRTHSSVQRTRSLPVHTSPQNMLMFQQPEFQLPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 TATPTIMKQGRQNLWFANPGGSNSMPSRTHSSVQRTRSLPVHTSPQNMLMFQQPEFQLPV 630 640 650 660 670 680 600 610 620 pF1KE6 TEPDINNRLESLCLSMTEHALGDGVDRTSTI ::::::::::::::::::::::::::::::: NP_056 TEPDINNRLESLCLSMTEHALGDGVDRTSTI 690 700 710 >-- initn: 384 init1: 384 opt: 384 Z-score: 340.1 bits: 73.3 E(85289): 3.3e-12 Smith-Waterman score: 384; 100.0% identity (100.0% similar) in 56 aa overlap (1-56:2-57) 10 20 30 40 50 pF1KE6 MFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCAELHVLER :::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCAELHVLER 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE6 EANSPGIINQWQQESKDKVISLLLTHLPLLKPGNLDAKVEYMKLLPKILAHSIEHNQHIE NP_056 EANSPGIINQWQQESKDKVISLLLTHLPLLKPGNLDAKVEYMKLLPKILAHSIEHNQHIE 70 80 90 100 110 120 >>NP_001155049 (OMIM: 610747) protein Smaug homolog 1 is (345 aa) initn: 1835 init1: 1835 opt: 1837 Z-score: 1605.3 bits: 306.3 E(85289): 1.1e-82 Smith-Waterman score: 1975; 89.4% identity (89.4% similar) in 341 aa overlap (321-625:1-341) 300 310 320 330 340 350 pF1KE6 LKERQNLLKSLERDIIEGGSLRIPLQELHQMILTPIKAYSSPSTTPEARRREPQAPRQPS :::::::::::::::::::::::::::::: NP_001 MILTPIKAYSSPSTTPEARRREPQAPRQPS 10 20 30 360 370 380 390 400 410 pF1KE6 LMGPESQSPDCKDGAAATGATATPSAGASGGLQPHQLSSCDGELAVAPLPEGDLPGQFTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LMGPESQSPDCKDGAAATGATATPSAGASGGLQPHQLSSCDGELAVAPLPEGDLPGQFTR 40 50 60 70 80 90 420 430 440 450 460 470 pF1KE6 VMGKVCTQLLVSRPDEENISSYLQLIDKCLIHEAFTETQKKRLLSWKQQVQKLFRSFPRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VMGKVCTQLLVSRPDEENISSYLQLIDKCLIHEAFTETQKKRLLSWKQQVQKLFRSFPRK 100 110 120 130 140 150 480 490 500 510 520 530 pF1KE6 TLLDISGYRQQRNRGFGQSNSLPTAGSVGGGMGRRNPRQYQIPSRNVPSARLGLLGTSGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TLLDISGYRQQRNRGFGQSNSLPTAGSVGGGMGRRNPRQYQIPSRNVPSARLGLLGTSGF 160 170 180 190 200 210 540 550 560 570 580 590 pF1KE6 VSSNQRNTTATPTIMKQGRQNLWFANPGGSNSMPSRTHSSVQRTRSLPVHTSPQNMLMFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VSSNQRNTTATPTIMKQGRQNLWFANPGGSNSMPSRTHSSVQRTRSLPVHTSPQNMLMFQ 220 230 240 250 260 270 600 610 pF1KE6 QP------------------------------------EFQLPVTEPDINNRLESLCLSM :: :::::::::::::::::::::: NP_001 QPGSQVHSGLCLTDLRGWLSLSGAPSMPALTVPKSSQGEFQLPVTEPDINNRLESLCLSM 280 290 300 310 320 330 620 pF1KE6 TEHALGDGVDRTSTI ::::::::::: NP_001 TEHALGDGVDRTSTI 340 629 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 16:20:35 2016 done: Tue Nov 8 16:20:36 2016 Total Scan time: 9.960 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]