Result of FASTA (omim) for pFN21AE6291
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE6291, 298 aa
  1>>>pF1KE6291 298 - 298 aa - 298 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.4383+/-0.000463; mu= 20.0168+/- 0.028
 mean_var=63.2875+/-13.524, 0's: 0 Z-trim(108.7): 268  B-trim: 0 in 0/51
 Lambda= 0.161219
 statistics sampled from 16499 (16797) to 16499 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.544), E-opt: 0.2 (0.197), width:  16
 Scan time:  5.600

The best scores are:                                      opt bits E(85289)
NP_001627 (OMIM: 300151,403000) ADP/ATP translocas ( 298) 1975 468.4 7.3e-132
NP_001143 (OMIM: 300150) ADP/ATP translocase 2 [Ho ( 298) 1866 443.1 3.1e-124
NP_001142 (OMIM: 103220,609283,615418) ADP/ATP tra ( 298) 1813 430.8 1.6e-120
NP_112581 (OMIM: 610796) ADP/ATP translocase 4 iso ( 315) 1441 344.3 1.9e-94
NP_001305396 (OMIM: 610796) ADP/ATP translocase 4  ( 272) 1239 297.2 2.3e-80
XP_011530600 (OMIM: 610796) PREDICTED: ADP/ATP tra ( 224)  641 158.1 1.5e-38
NP_001308473 (OMIM: 610823) mitochondrial coenzyme ( 318)  410 104.5 2.9e-22
NP_848621 (OMIM: 610823) mitochondrial coenzyme A  ( 318)  410 104.5 2.9e-22
XP_005259918 (OMIM: 610823) PREDICTED: mitochondri ( 318)  410 104.5 2.9e-22
XP_011526239 (OMIM: 610823) PREDICTED: mitochondri ( 318)  410 104.5 2.9e-22
XP_016882159 (OMIM: 610823) PREDICTED: mitochondri ( 382)  410 104.5 3.3e-22
NP_001269127 (OMIM: 300242) brain mitochondrial ca ( 290)  377 96.8 5.5e-20
NP_001269125 (OMIM: 300242) brain mitochondrial ca ( 322)  377 96.8 5.9e-20
NP_001269124 (OMIM: 300242) brain mitochondrial ca ( 325)  377 96.8   6e-20
XP_011529704 (OMIM: 300242) PREDICTED: brain mitoc ( 334)  377 96.8 6.1e-20
NP_001010875 (OMIM: 610793) kidney mitochondrial c ( 291)  376 96.5 6.5e-20
XP_016876013 (OMIM: 610793) PREDICTED: kidney mito ( 291)  376 96.5 6.5e-20
NP_660348 (OMIM: 300641) solute carrier family 25  ( 341)  372 95.7 1.4e-19
XP_016885425 (OMIM: 300242) PREDICTED: brain mitoc ( 306)  371 95.4 1.5e-19
XP_016885428 (OMIM: 300242) PREDICTED: brain mitoc ( 338)  371 95.4 1.6e-19
XP_016885427 (OMIM: 300242) PREDICTED: brain mitoc ( 341)  371 95.4 1.6e-19
XP_016885426 (OMIM: 300242) PREDICTED: brain mitoc ( 350)  371 95.4 1.7e-19
NP_004268 (OMIM: 613725) mitochondrial uncoupling  ( 323)  349 90.3 5.4e-18
NP_110407 (OMIM: 610815,616839) mitochondrial fola ( 315)  346 89.6 8.7e-18
NP_001190980 (OMIM: 613725) mitochondrial uncoupli ( 300)  343 88.9 1.4e-17
XP_005249540 (OMIM: 613725) PREDICTED: mitochondri ( 310)  343 88.9 1.4e-17
XP_005251746 (OMIM: 608745) PREDICTED: calcium-bin ( 366)  308 80.8 4.4e-15
XP_006717012 (OMIM: 608745) PREDICTED: calcium-bin ( 378)  308 80.8 4.5e-15
NP_443133 (OMIM: 608745) calcium-binding mitochond ( 469)  308 80.9 5.3e-15
XP_006717011 (OMIM: 608745) PREDICTED: calcium-bin ( 481)  308 80.9 5.4e-15
NP_001006643 (OMIM: 608745) calcium-binding mitoch ( 489)  308 80.9 5.4e-15
NP_001252543 (OMIM: 608745) calcium-binding mitoch ( 501)  308 80.9 5.5e-15
NP_001006642 (OMIM: 608745) calcium-binding mitoch ( 503)  308 80.9 5.5e-15
NP_001317917 (OMIM: 608745) calcium-binding mitoch ( 515)  308 80.9 5.6e-15
NP_001273735 (OMIM: 610793) kidney mitochondrial c ( 240)  302 79.2 8.6e-15
XP_016884830 (OMIM: 300641) PREDICTED: solute carr ( 231)  285 75.3 1.3e-13
XP_016884829 (OMIM: 300641) PREDICTED: solute carr ( 258)  285 75.3 1.4e-13
XP_011535590 (OMIM: 607571) PREDICTED: mitochondri ( 269)  285 75.3 1.4e-13
XP_011535589 (OMIM: 607571) PREDICTED: mitochondri ( 303)  285 75.4 1.6e-13
NP_997231 (OMIM: 610817) solute carrier family 25  ( 304)  284 75.1 1.9e-13
XP_011533329 (OMIM: 610793) PREDICTED: kidney mito ( 216)  273 72.4 8.5e-13
NP_001273736 (OMIM: 610793) kidney mitochondrial c ( 216)  273 72.4 8.5e-13
NP_689920 (OMIM: 139080) graves disease carrier pr ( 332)  269 71.7 2.2e-12
XP_011538513 (OMIM: 139080) PREDICTED: graves dise ( 332)  269 71.7 2.2e-12
XP_016856593 (OMIM: 608744) PREDICTED: calcium-bin ( 271)  264 70.4 4.3e-12
XP_016876472 (OMIM: 615064) PREDICTED: mitochondri ( 237)  261 69.7 6.3e-12
NP_689546 (OMIM: 615064) mitochondrial basic amino ( 237)  261 69.7 6.3e-12
XP_016876469 (OMIM: 615064) PREDICTED: mitochondri ( 237)  261 69.7 6.3e-12
XP_011534749 (OMIM: 615064) PREDICTED: mitochondri ( 237)  261 69.7 6.3e-12
NP_001278743 (OMIM: 615064) mitochondrial basic am ( 237)  261 69.7 6.3e-12


>>NP_001627 (OMIM: 300151,403000) ADP/ATP translocase 3   (298 aa)
 initn: 1975 init1: 1975 opt: 1975  Z-score: 2488.3  bits: 468.4 E(85289): 7.3e-132
Smith-Waterman score: 1975; 100.0% identity (100.0% similar) in 298 aa overlap (1-298:1-298)

               10        20        30        40        50        60
pF1KE6 MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAADKQYKGIVDCIVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAADKQYKGIVDCIVR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 GAAGATSLCFVYPLDFARTRLAADVGKSGTEREFRGLGDCLVKITKSDGIRGLYQGFSVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAAGATSLCFVYPLDFARTRLAADVGKSGTEREFRGLGDCLVKITKSDGIRGLYQGFSVS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE6 VQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVSYPFDTVRRRMMM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVSYPFDTVRRRMMM
              190       200       210       220       230       240

              250       260       270       280       290        
pF1KE6 QSGRKGADIMYTGTVDCWRKIFRDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKVI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSGRKGADIMYTGTVDCWRKIFRDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKVI
              250       260       270       280       290        

>>NP_001143 (OMIM: 300150) ADP/ATP translocase 2 [Homo s  (298 aa)
 initn: 1866 init1: 1866 opt: 1866  Z-score: 2351.3  bits: 443.1 E(85289): 3.1e-124
Smith-Waterman score: 1866; 92.6% identity (98.6% similar) in 296 aa overlap (1-296:1-296)

               10        20        30        40        50        60
pF1KE6 MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAADKQYKGIVDCIVR
       ::. :.::::::::::.::::::::::::::::::::::::::::.::::::::.::.::
NP_001 MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASG
       :::::::::::::::::::::::::::::::::::::::::::::.:::: :::::::::
NP_001 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWLYFAGNLASG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 GAAGATSLCFVYPLDFARTRLAADVGKSGTEREFRGLGDCLVKITKSDGIRGLYQGFSVS
       :::::::::::::::::::::::::::.:.:::::::::::::: :::::.::::::.::
NP_001 GAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIKGLYQGFNVS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE6 VQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVSYPFDTVRRRMMM
       :::::::::::::.:::::::::::::::::.:::::::::::::..:::::::::::::
NP_001 VQGIIIYRAAYFGIYDTAKGMLPDPKNTHIVISWMIAQTVTAVAGLTSYPFDTVRRRMMM
              190       200       210       220       230       240

              250       260       270       280       290        
pF1KE6 QSGRKGADIMYTGTVDCWRKIFRDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKVI
       ::::::.:::::::.:::::: :::::::::::::::::::::::::::::::.::  
NP_001 QSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYT
              250       260       270       280       290        

>>NP_001142 (OMIM: 103220,609283,615418) ADP/ATP translo  (298 aa)
 initn: 1975 init1: 1803 opt: 1813  Z-score: 2284.7  bits: 430.8 E(85289): 1.6e-120
Smith-Waterman score: 1813; 88.3% identity (97.0% similar) in 298 aa overlap (1-298:1-298)

               10        20        30        40        50        60
pF1KE6 MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAADKQYKGIVDCIVR
       : ..: :: :::::::.:::.::::::::::::::::::::::::.:.::::::.::.::
NP_001 MGDHAWSFLKDFLAGGVAAAVSKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASG
       :::::: ::::::::::::::::::::::::::::::.::::::.: :::::::::::::
NP_001 IPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQLFLGGVDRHKQFWRYFAGNLASG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 GAAGATSLCFVYPLDFARTRLAADVGKSGTEREFRGLGDCLVKITKSDGIRGLYQGFSVS
       :::::::::::::::::::::::::::....:::.:::::..:: ::::.:::::::.::
NP_001 GAAGATSLCFVYPLDFARTRLAADVGKGAAQREFHGLGDCIIKIFKSDGLRGLYQGFNVS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE6 VQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVSYPFDTVRRRMMM
       :::::::::::::::::::::::::::.:: :::::::.::::::.::::::::::::::
NP_001 VQGIIIYRAAYFGVYDTAKGMLPDPKNVHIFVSWMIAQSVTAVAGLVSYPFDTVRRRMMM
              190       200       210       220       230       240

              250       260       270       280       290        
pF1KE6 QSGRKGADIMYTGTVDCWRKIFRDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKVI
       ::::::::::::::::::::: .:::.::::::::::::::::::::::::::.:: .
NP_001 QSGRKGADIMYTGTVDCWRKIAKDEGAKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYV
              250       260       270       280       290        

>>NP_112581 (OMIM: 610796) ADP/ATP translocase 4 isoform  (315 aa)
 initn: 1434 init1: 1252 opt: 1441  Z-score: 1816.8  bits: 344.3 E(85289): 1.9e-94
Smith-Waterman score: 1441; 72.3% identity (92.1% similar) in 292 aa overlap (5-296:17-306)

                           10        20        30        40        
pF1KE6             MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAAD
                       : ::.::.::::.:::.:::::::::::::::::: .::::. .
NP_112 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE
               10        20        30        40        50        60

       50        60        70        80        90       100        
pF1KE6 KQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQ
        .:::.:::.::::.::: .:::::::::::::::::::::::::::::.:..::.:. :
NP_112 ARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQ
               70        80        90       100       110       120

      110       120       130       140       150       160        
pF1KE6 FWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKSGTEREFRGLGDCLVKITKSD
       :::.: .:::::::::::::: :::::::::::..:.::.  ::.:.:::::..::.:::
NP_112 FWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSD
              130       140       150       160       170       180

      170       180       190       200       210       220        
pF1KE6 GIRGLYQGFSVSVQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVS
       :: ::::::.:::::::.:::.:::.:::.::.:: ::.: ..::..:::.::. .:..:
NP_112 GIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILS
              190       200       210       220       230       240

      230       240       250       260       270       280        
pF1KE6 YPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIFRDEGGKAFFKGAWSNVLRGMGGAFVL
       :::::::::::::::.  :  .: ::.::. ::.. :: ..::.::.:::::: :::.::
NP_112 YPFDTVRRRMMMQSGE--AKRQYKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVL
              250         260       270       280       290        

      290               
pF1KE6 VLYDELKKVI       
       ::::..:.         
NP_112 VLYDKIKEFFHIDIGGR
      300       310     

>>NP_001305396 (OMIM: 610796) ADP/ATP translocase 4 isof  (272 aa)
 initn: 1239 init1: 1239 opt: 1239  Z-score: 1563.7  bits: 297.2 E(85289): 2.3e-80
Smith-Waterman score: 1239; 75.5% identity (94.1% similar) in 237 aa overlap (5-241:17-253)

                           10        20        30        40        
pF1KE6             MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAAD
                       : ::.::.::::.:::.:::::::::::::::::: .::::. .
NP_001 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE
               10        20        30        40        50        60

       50        60        70        80        90       100        
pF1KE6 KQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQ
        .:::.:::.::::.::: .:::::::::::::::::::::::::::::.:..::.:. :
NP_001 ARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQ
               70        80        90       100       110       120

      110       120       130       140       150       160        
pF1KE6 FWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKSGTEREFRGLGDCLVKITKSD
       :::.: .:::::::::::::: :::::::::::..:.::.  ::.:.:::::..::.:::
NP_001 FWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEERQFKGLGDCIMKIAKSD
              130       140       150       160       170       180

      170       180       190       200       210       220        
pF1KE6 GIRGLYQGFSVSVQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVS
       :: ::::::.:::::::.:::.:::.:::.::.:: ::.: ..::..:::.::. .:..:
NP_001 GIAGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKKTPFLVSFFIAQVVTTCSGILS
              190       200       210       220       230       240

      230       240       250       260       270       280        
pF1KE6 YPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIFRDEGGKAFFKGAWSNVLRGMGGAFVL
       :::::::::::::                                               
NP_001 YPFDTVRRRMMMQVINFLINYNSKLHLKNLEW                            
              250       260       270                              

>>XP_011530600 (OMIM: 610796) PREDICTED: ADP/ATP translo  (224 aa)
 initn: 782 init1: 549 opt: 641  Z-score: 813.1  bits: 158.1 E(85289): 1.5e-38
Smith-Waterman score: 755; 48.3% identity (62.7% similar) in 292 aa overlap (5-296:17-215)

                           10        20        30        40        
pF1KE6             MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAAD
                       : ::.::.::::.:::.:::::::::::::::::: .::::. .
XP_011 MHREPAKKKAEKRLFDASSFGKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPE
               10        20        30        40        50        60

       50        60        70        80        90       100        
pF1KE6 KQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQ
        .:::.:::.::::.::: .:::::::::::::::::::::::::::::.:..::.:. :
XP_011 ARYKGMVDCLVRIPREQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQ
               70        80        90       100       110       120

      110       120       130       140       150       160        
pF1KE6 FWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKSGTEREFRGLGDCLVKITKSD
                                                                   
XP_011 ------------------------------------------------------------
                                                                   

      170       180       190       200       210       220        
pF1KE6 GIRGLYQGFSVSVQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVS
                                      :.:: ::.: ..::..:::.::. .:..:
XP_011 -------------------------------GLLPKPKKTPFLVSFFIAQVVTTCSGILS
                                             130       140         

      230       240       250       260       270       280        
pF1KE6 YPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIFRDEGGKAFFKGAWSNVLRGMGGAFVL
       :::::::::::::::.  :  .: ::.::. ::.. :: ..::.::.:::::: :::.::
XP_011 YPFDTVRRRMMMQSGE--AKRQYKGTLDCFVKIYQHEGISSFFRGAFSNVLRGTGGALVL
     150       160         170       180       190       200       

      290               
pF1KE6 VLYDELKKVI       
       ::::..:.         
XP_011 VLYDKIKEFFHIDIGGR
       210       220    

>>NP_001308473 (OMIM: 610823) mitochondrial coenzyme A t  (318 aa)
 initn: 348 init1: 104 opt: 410  Z-score: 520.7  bits: 104.5 E(85289): 2.9e-22
Smith-Waterman score: 410; 32.0% identity (63.7% similar) in 281 aa overlap (12-281:37-295)

                                  10        20        30        40 
pF1KE6                    MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHA
                                     .:.:..:.:..::::::..:.:...::  .
NP_001 EGPVRLHEDAEAVLSSSVSSKRDHRQVLSSLLSGALAGALAKTAVAPLDRTKIIFQV--S
         10        20        30        40        50        60      

              50        60        70        80        90           
pF1KE6 SKQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQI---
       ::...: . .. .    .    ..: ::.:::: :...:  :  :..:. ...::.:   
NP_001 SKRFSAKEAFRVLYYTYL----NEGFLSLWRGNSATMVRVVPYAAIQFSAHEEYKRILGS
           70        80            90       100       110       120

      100       110        120       130       140       150       
pF1KE6 FLGGVDKHTQFW-RYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKSGTERE-FRG
       . :   .    : : ::: ::     :.:.  ..::::..:.:.:.      : .: . .
NP_001 YYGFRGEALPPWPRLFAGALA-----GTTAASLTYPLDLVRARMAV------TPKEMYSN
              130       140            150       160               

        160       170       180       190       200       210      
pF1KE6 LGDCLVKITKSDGIRGLYQGFSVSVQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSW--
       .   ...:.. .:.. ::.::  .: :.: : .  : .:.: :..  . .. .    .  
NP_001 IFHVFIRISREEGLKTLYHGFMPTVLGVIPYAGLSFFTYETLKSLHREYSGRRQPYPFER
     170       180       190       200       210       220         

          220        230       240         250       260        270
pF1KE6 MIAQTVTAVAG-VVSYPFDTVRRRMMMQ--SGRKGADIMYTGTVDCWRKIFRDEGG-KAF
       ::  . ... :  .:::.:.:::::.    .:   :.:  :      : : :.::. ...
NP_001 MIFGACAGLIGQSASYPLDVVRRRMQTAGVTGYPRASIART-----LRTIVREEGAVRGL
     230       240       250       260       270            280    

              280       290              
pF1KE6 FKGAWSNVLRGMGGAFVLVLYDELKKVI      
       .::   : ..:                       
NP_001 YKGLSMNWVKGPIAVGISFTTFDLMQILLRHLQS
          290       300       310        

>>NP_848621 (OMIM: 610823) mitochondrial coenzyme A tran  (318 aa)
 initn: 348 init1: 104 opt: 410  Z-score: 520.7  bits: 104.5 E(85289): 2.9e-22
Smith-Waterman score: 410; 32.0% identity (63.7% similar) in 281 aa overlap (12-281:37-295)

                                  10        20        30        40 
pF1KE6                    MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHA
                                     .:.:..:.:..::::::..:.:...::  .
NP_848 EGPVRLHEDAEAVLSSSVSSKRDHRQVLSSLLSGALAGALAKTAVAPLDRTKIIFQV--S
         10        20        30        40        50        60      

              50        60        70        80        90           
pF1KE6 SKQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQI---
       ::...: . .. .    .    ..: ::.:::: :...:  :  :..:. ...::.:   
NP_848 SKRFSAKEAFRVLYYTYL----NEGFLSLWRGNSATMVRVVPYAAIQFSAHEEYKRILGS
           70        80            90       100       110       120

      100       110        120       130       140       150       
pF1KE6 FLGGVDKHTQFW-RYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKSGTERE-FRG
       . :   .    : : ::: ::     :.:.  ..::::..:.:.:.      : .: . .
NP_848 YYGFRGEALPPWPRLFAGALA-----GTTAASLTYPLDLVRARMAV------TPKEMYSN
              130       140            150       160               

        160       170       180       190       200       210      
pF1KE6 LGDCLVKITKSDGIRGLYQGFSVSVQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSW--
       .   ...:.. .:.. ::.::  .: :.: : .  : .:.: :..  . .. .    .  
NP_848 IFHVFIRISREEGLKTLYHGFMPTVLGVIPYAGLSFFTYETLKSLHREYSGRRQPYPFER
     170       180       190       200       210       220         

          220        230       240         250       260        270
pF1KE6 MIAQTVTAVAG-VVSYPFDTVRRRMMMQ--SGRKGADIMYTGTVDCWRKIFRDEGG-KAF
       ::  . ... :  .:::.:.:::::.    .:   :.:  :      : : :.::. ...
NP_848 MIFGACAGLIGQSASYPLDVVRRRMQTAGVTGYPRASIART-----LRTIVREEGAVRGL
     230       240       250       260       270            280    

              280       290              
pF1KE6 FKGAWSNVLRGMGGAFVLVLYDELKKVI      
       .::   : ..:                       
NP_848 YKGLSMNWVKGPIAVGISFTTFDLMQILLRHLQS
          290       300       310        

>>XP_005259918 (OMIM: 610823) PREDICTED: mitochondrial c  (318 aa)
 initn: 348 init1: 104 opt: 410  Z-score: 520.7  bits: 104.5 E(85289): 2.9e-22
Smith-Waterman score: 410; 32.0% identity (63.7% similar) in 281 aa overlap (12-281:37-295)

                                  10        20        30        40 
pF1KE6                    MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHA
                                     .:.:..:.:..::::::..:.:...::  .
XP_005 EGPVRLHEDAEAVLSSSVSSKRDHRQVLSSLLSGALAGALAKTAVAPLDRTKIIFQV--S
         10        20        30        40        50        60      

              50        60        70        80        90           
pF1KE6 SKQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQI---
       ::...: . .. .    .    ..: ::.:::: :...:  :  :..:. ...::.:   
XP_005 SKRFSAKEAFRVLYYTYL----NEGFLSLWRGNSATMVRVVPYAAIQFSAHEEYKRILGS
           70        80            90       100       110       120

      100       110        120       130       140       150       
pF1KE6 FLGGVDKHTQFW-RYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKSGTERE-FRG
       . :   .    : : ::: ::     :.:.  ..::::..:.:.:.      : .: . .
XP_005 YYGFRGEALPPWPRLFAGALA-----GTTAASLTYPLDLVRARMAV------TPKEMYSN
              130       140            150       160               

        160       170       180       190       200       210      
pF1KE6 LGDCLVKITKSDGIRGLYQGFSVSVQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSW--
       .   ...:.. .:.. ::.::  .: :.: : .  : .:.: :..  . .. .    .  
XP_005 IFHVFIRISREEGLKTLYHGFMPTVLGVIPYAGLSFFTYETLKSLHREYSGRRQPYPFER
     170       180       190       200       210       220         

          220        230       240         250       260        270
pF1KE6 MIAQTVTAVAG-VVSYPFDTVRRRMMMQ--SGRKGADIMYTGTVDCWRKIFRDEGG-KAF
       ::  . ... :  .:::.:.:::::.    .:   :.:  :      : : :.::. ...
XP_005 MIFGACAGLIGQSASYPLDVVRRRMQTAGVTGYPRASIART-----LRTIVREEGAVRGL
     230       240       250       260       270            280    

              280       290              
pF1KE6 FKGAWSNVLRGMGGAFVLVLYDELKKVI      
       .::   : ..:                       
XP_005 YKGLSMNWVKGPIAVGISFTTFDLMQILLRHLQS
          290       300       310        

>>XP_011526239 (OMIM: 610823) PREDICTED: mitochondrial c  (318 aa)
 initn: 348 init1: 104 opt: 410  Z-score: 520.7  bits: 104.5 E(85289): 2.9e-22
Smith-Waterman score: 410; 32.0% identity (63.7% similar) in 281 aa overlap (12-281:37-295)

                                  10        20        30        40 
pF1KE6                    MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHA
                                     .:.:..:.:..::::::..:.:...::  .
XP_011 EGPVRLHEDAEAVLSSSVSSKRDHRQVLSSLLSGALAGALAKTAVAPLDRTKIIFQV--S
         10        20        30        40        50        60      

              50        60        70        80        90           
pF1KE6 SKQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQI---
       ::...: . .. .    .    ..: ::.:::: :...:  :  :..:. ...::.:   
XP_011 SKRFSAKEAFRVLYYTYL----NEGFLSLWRGNSATMVRVVPYAAIQFSAHEEYKRILGS
           70        80            90       100       110       120

      100       110        120       130       140       150       
pF1KE6 FLGGVDKHTQFW-RYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKSGTERE-FRG
       . :   .    : : ::: ::     :.:.  ..::::..:.:.:.      : .: . .
XP_011 YYGFRGEALPPWPRLFAGALA-----GTTAASLTYPLDLVRARMAV------TPKEMYSN
              130       140            150       160               

        160       170       180       190       200       210      
pF1KE6 LGDCLVKITKSDGIRGLYQGFSVSVQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSW--
       .   ...:.. .:.. ::.::  .: :.: : .  : .:.: :..  . .. .    .  
XP_011 IFHVFIRISREEGLKTLYHGFMPTVLGVIPYAGLSFFTYETLKSLHREYSGRRQPYPFER
     170       180       190       200       210       220         

          220        230       240         250       260        270
pF1KE6 MIAQTVTAVAG-VVSYPFDTVRRRMMMQ--SGRKGADIMYTGTVDCWRKIFRDEGG-KAF
       ::  . ... :  .:::.:.:::::.    .:   :.:  :      : : :.::. ...
XP_011 MIFGACAGLIGQSASYPLDVVRRRMQTAGVTGYPRASIART-----LRTIVREEGAVRGL
     230       240       250       260       270            280    

              280       290              
pF1KE6 FKGAWSNVLRGMGGAFVLVLYDELKKVI      
       .::   : ..:                       
XP_011 YKGLSMNWVKGPIAVGISFTTFDLMQILLRHLQS
          290       300       310        




298 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 11:50:23 2016 done: Tue Nov  8 11:50:24 2016
 Total Scan time:  5.600 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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