Result of FASTA (omim) for pFN21AE5782
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE5782, 684 aa
  1>>>pF1KE5782 684 - 684 aa - 684 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.3073+/-0.000443; mu= 16.1019+/- 0.028
 mean_var=103.6670+/-20.717, 0's: 0 Z-trim(111.5): 59  B-trim: 0 in 0/53
 Lambda= 0.125966
 statistics sampled from 20122 (20170) to 20122 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.597), E-opt: 0.2 (0.236), width:  16
 Scan time:  7.340

The best scores are:                                      opt bits E(85289)
NP_006611 (OMIM: 612450) HBS1-like protein isoform ( 684) 4472 824.0       0
NP_001138630 (OMIM: 612450) HBS1-like protein isof ( 642) 3954 729.9 7.2e-210
NP_060564 (OMIM: 300418) eukaryotic peptide chain  ( 628) 1175 224.8 7.5e-58
NP_001123479 (OMIM: 139259) eukaryotic peptide cha ( 499) 1162 222.4 3.2e-57
NP_001123478 (OMIM: 139259) eukaryotic peptide cha ( 636) 1162 222.5 3.9e-57
NP_002085 (OMIM: 139259) eukaryotic peptide chain  ( 637) 1162 222.5 3.9e-57
NP_001138679 (OMIM: 612450) HBS1-like protein isof ( 632)  947 183.4 2.3e-45
NP_001393 (OMIM: 130590) elongation factor 1-alpha ( 462)  745 146.6   2e-34
XP_011533816 (OMIM: 130590) PREDICTED: elongation  ( 462)  745 146.6   2e-34
NP_001949 (OMIM: 602959,616393,616409) elongation  ( 463)  739 145.5 4.2e-34
XP_016865681 (OMIM: 612450) PREDICTED: HBS1-like p ( 590)  429 89.3 4.6e-17
XP_016884592 (OMIM: 602245) PREDICTED: GTP-binding ( 614)  300 65.8 5.5e-10
NP_004277 (OMIM: 602245) GTP-binding protein 1 [Ho ( 669)  300 65.9 5.9e-10
XP_016884589 (OMIM: 602245) PREDICTED: GTP-binding ( 726)  300 65.9 6.3e-10
XP_011544230 (OMIM: 602389,610678) PREDICTED: elon ( 427)  266 59.5   3e-08
XP_016879108 (OMIM: 602389,610678) PREDICTED: elon ( 455)  266 59.6 3.1e-08
NP_003312 (OMIM: 602389,610678) elongation factor  ( 455)  266 59.6 3.1e-08
XP_016884591 (OMIM: 602245) PREDICTED: GTP-binding ( 622)  226 52.4 6.2e-06
XP_016884590 (OMIM: 602245) PREDICTED: GTP-binding ( 684)  226 52.4 6.7e-06
XP_011528839 (OMIM: 602245) PREDICTED: GTP-binding ( 703)  226 52.4 6.8e-06
XP_016884588 (OMIM: 602245) PREDICTED: GTP-binding ( 734)  226 52.4   7e-06
XP_016862469 (OMIM: 607695) PREDICTED: selenocyste ( 491)  175 43.0  0.0032
XP_016862468 (OMIM: 607695) PREDICTED: selenocyste ( 525)  175 43.1  0.0033
XP_016862467 (OMIM: 607695) PREDICTED: selenocyste ( 536)  175 43.1  0.0034
XP_016862466 (OMIM: 607695) PREDICTED: selenocyste ( 553)  175 43.1  0.0035
XP_016862465 (OMIM: 607695) PREDICTED: selenocyste ( 571)  175 43.1  0.0036
XP_016862464 (OMIM: 607695) PREDICTED: selenocyste ( 575)  175 43.1  0.0036
NP_068756 (OMIM: 607695) selenocysteine-specific e ( 596)  175 43.1  0.0037
NP_001273145 (OMIM: 607434) GTP-binding protein 2  ( 514)  172 42.5  0.0048
NP_061969 (OMIM: 607434) GTP-binding protein 2 iso ( 602)  172 42.6  0.0054
XP_016866465 (OMIM: 607434) PREDICTED: GTP-binding ( 493)  167 41.6  0.0087


>>NP_006611 (OMIM: 612450) HBS1-like protein isoform 1 [  (684 aa)
 initn: 4472 init1: 4472 opt: 4472  Z-score: 4397.2  bits: 824.0 E(85289):    0
Smith-Waterman score: 4472; 100.0% identity (100.0% similar) in 684 aa overlap (1-684:1-684)

               10        20        30        40        50        60
pF1KE5 MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVEPVEEYDYED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVEPVEEYDYED
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 LKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 EQDRVQSLKDKNEATVSTGKIAKGKPVDSQTSRSESEIVPKVAKMTVSGKKQTMGFEVPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 EQDRVQSLKDKNEATVSTGKIAKGKPVDSQTSRSESEIVPKVAKMTVSGKKQTMGFEVPG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 VSSEENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTIQASEEQSSTPAPVKKSGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 VSSEENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTIQASEEQSSTPAPVKKSGK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE5 LRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESK
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE5 KAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE5 QADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQE
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE5 ITGKLGHFLKQAGFKESDVGFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 ITGKLGHFLKQAGFKESDVGFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKPP
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE5 QRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTVKGITLHDEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTVKGITLHDEP
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE5 VDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRARILIFNIEIPITKGFPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 VDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRARILIFNIEIPITKGFPV
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KE5 LLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFK
              610       620       630       640       650       660

              670       680    
pF1KE5 ELGRFMLRYGGSTIAAGVVTEIKE
       ::::::::::::::::::::::::
NP_006 ELGRFMLRYGGSTIAAGVVTEIKE
              670       680    

>>NP_001138630 (OMIM: 612450) HBS1-like protein isoform   (642 aa)
 initn: 3954 init1: 3954 opt: 3954  Z-score: 3888.8  bits: 729.9 E(85289): 7.2e-210
Smith-Waterman score: 4102; 93.9% identity (93.9% similar) in 684 aa overlap (1-684:1-642)

               10        20        30        40        50        60
pF1KE5 MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVEPVEEYDYED
       :::::::::::::::::::::::::::::::::::::                       
NP_001 MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTA-----------------------
               10        20        30                              

               70        80        90       100       110       120
pF1KE5 LKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL
                          :::::::::::::::::::::::::::::::::::::::::
NP_001 -------------------RLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL
                           40        50        60        70        

              130       140       150       160       170       180
pF1KE5 EQDRVQSLKDKNEATVSTGKIAKGKPVDSQTSRSESEIVPKVAKMTVSGKKQTMGFEVPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQDRVQSLKDKNEATVSTGKIAKGKPVDSQTSRSESEIVPKVAKMTVSGKKQTMGFEVPG
       80        90       100       110       120       130        

              190       200       210       220       230       240
pF1KE5 VSSEENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTIQASEEQSSTPAPVKKSGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VSSEENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTIQASEEQSSTPAPVKKSGK
      140       150       160       170       180       190        

              250       260       270       280       290       300
pF1KE5 LRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESK
      200       210       220       230       240       250        

              310       320       330       340       350       360
pF1KE5 KAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAA
      260       270       280       290       300       310        

              370       380       390       400       410       420
pF1KE5 QADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQE
      320       330       340       350       360       370        

              430       440       450       460       470       480
pF1KE5 ITGKLGHFLKQAGFKESDVGFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ITGKLGHFLKQAGFKESDVGFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKPP
      380       390       400       410       420       430        

              490       500       510       520       530       540
pF1KE5 QRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTVKGITLHDEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTVKGITLHDEP
      440       450       460       470       480       490        

              550       560       570       580       590       600
pF1KE5 VDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRARILIFNIEIPITKGFPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRARILIFNIEIPITKGFPV
      500       510       520       530       540       550        

              610       620       630       640       650       660
pF1KE5 LLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFK
      560       570       580       590       600       610        

              670       680    
pF1KE5 ELGRFMLRYGGSTIAAGVVTEIKE
       ::::::::::::::::::::::::
NP_001 ELGRFMLRYGGSTIAAGVVTEIKE
      620       630       640  

>>NP_060564 (OMIM: 300418) eukaryotic peptide chain rele  (628 aa)
 initn: 900 init1: 636 opt: 1175  Z-score: 1159.5  bits: 224.8 E(85289): 7.5e-58
Smith-Waterman score: 1179; 37.9% identity (67.9% similar) in 546 aa overlap (140-682:103-623)

     110       120       130       140       150       160         
pF1KE5 FDVQKALSGVLEQDRVQSLKDKNEATVSTGKIAKGKPVDSQTSRSESEIVPKVAKMTVSG
                                     ....: ::.   :: :    : :. .  :.
NP_060 LRGPTQPPTLPAGSGSNDETCTGAGYPQGKRMGRGAPVEP--SREE----PLVS-LEGSN
             80        90       100       110             120      

     170       180       190       200       210       220         
pF1KE5 KKQTMGFEVPGVSSEENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTIQASEEQS
       .  :: .  : :   :::.   . ...      .. ..    .: ...::.  ....:. 
NP_060 SAVTMELSEPVV---ENGEVEMALEESWEHSKEVSEAEPGGGSSGDSGPPE--ESGQEMM
         130          140       150       160       170         180

     230       240       250       260       270       280         
pF1KE5 STPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINK
            ..::    ... : .   :    :. .:.: ::::::::::. :....: : ..:
NP_060 EEKEEIRKS----KSVIVPSGAPK----KEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDK
                  190       200           210       220       230  

     290       300       310       320       330       340         
pF1KE5 RTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHK
       ::..:::.:.:. .. ..  .:.:: . :::..: :..:: . :::  : .:..::::::
NP_060 RTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHK
            240       250       260       270       280       290  

     350       360       370       380       390       400         
pF1KE5 DFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMD
       .:.:::: ::.:::.::::..: .::::.::: :::::::..:... :: .: : .::::
NP_060 SFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMD
            300       310       320       330       340       350  

     410         420       430        440       450       460      
pF1KE5 Q--VNWQQERFQEITGKLGHFLKQAGFK-ESDVGFIPTSGLSGENLITRSQSSELTKWYK
       .  :::. ::..:   ::  :::..::. ..:. :.: :::.: :.   ...:..  :: 
NP_060 DPTVNWSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANI---KEQSDFCPWYT
            360       370       380       390          400         

        470       480       490       500       510       520      
pF1KE5 GLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPN
       :: ..  .:..   .:::: :.:: . : .::.:.   . ::.:.: :  :..:. :: .
NP_060 GLPFIPYLDNLPNFNRSIDGPIRLPIVDKYKDMGT--VVLGKLESGSIFKGQQLVMMPNK
     410       420       430       440         450       460       

        530       540       550       560       570       580      
pF1KE5 ETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRARIL
       ..  : ::   :  .:..: :..... : :..  .:  : :.: :.   ..   : ..:.
NP_060 HNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSNLCHSGRTFDVQIV
       470       480       490       500       510       520       

        590       600       610       620       630       640      
pF1KE5 IFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQ
       :.. .  :  :. ..:: .:  : . :  :::...:..:: .: .:.:. . :  ...:.
NP_060 IIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLR
       530       540       550       560       570       580       

        650       660       670       680       
pF1KE5 TQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE   
       :   : :: .::: ..::: ::  :.::: : : ..     
NP_060 TAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
       590       600       610       620        

>>NP_001123479 (OMIM: 139259) eukaryotic peptide chain r  (499 aa)
 initn: 951 init1: 637 opt: 1162  Z-score: 1148.2  bits: 222.4 E(85289): 3.2e-57
Smith-Waterman score: 1167; 39.0% identity (68.4% similar) in 503 aa overlap (185-682:9-494)

          160       170       180       190       200       210    
pF1KE5 ESEIVPKVAKMTVSGKKQTMGFEVPGVSSEENGHSFHTPQKGPPIEDAIASSDVLETASK
                                     :::..  .:...   .. :. ..    .  
NP_001                       MELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLG
                                     10        20        30        

          220         230       240       250       260       270  
pF1KE5 SANPPHTI--QASEEQSSTPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAG
       .. ::.    .  ::.   : :        ... .     :    :. .:.: :::::::
NP_001 DGRPPEESAHEMMEEEEEIPKP--------KSVVAPPGAPK----KEHVNVVFIGHVDAG
       40        50        60                70            80      

            280       290       300       310       320       330  
pF1KE5 KSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTK
       :::. :...:: : ..:::..:::.:.:. .. ..  .:.:: . :::..: :..:: . 
NP_001 KSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAY
         90       100       110       120       130       140      

            340       350       360       370       380       390  
pF1KE5 FETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLL
       :::  : .:..::::::.:.:::: ::.:::.::::..: .::::.::: :::::::..:
NP_001 FETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAML
        150       160       170       180       190       200      

            400       410         420       430        440         
pF1KE5 VRSLGVTQLAVAVNKMDQ--VNWQQERFQEITGKLGHFLKQAGFK-ESDVGFIPTSGLSG
       ... :: .: : .::::.  :::..::..:   ::  :::..::. ..:. :.: :::.:
NP_001 AKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTG
        210       220       230       240       250       260      

     450       460       470       480       490       500         
pF1KE5 ENLITRSQSSELTKWYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKI
        ::   ...:..  :: :: ..  .:..   .::.: :.:: . : .::.:.   . ::.
NP_001 ANL---KEQSDFCPWYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGT--VVLGKL
           270       280       290       300       310         320 

     510       520       530       540       550       560         
pF1KE5 EAGYIQTGDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFC
       :.: :  :..:. :: ...  : ::   :  .: .: :..... : :..  .:  : :.:
NP_001 ESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILC
             330       340       350       360       370       380 

     570       580       590       600       610       620         
pF1KE5 GPKVPIKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTK
        :.   ..   : :.:.:.. .  :  :. ..:: .:  : . :  :: ...:..:: .:
NP_001 DPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSK
             390       400       410       420       430       440 

     630       640       650       660       670       680       
pF1KE5 KKPKFLTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE   
        .:.:. . :  ...:.:   : :: .::: ..::: ::  :.::: : : ..     
NP_001 TRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
             450       460       470       480       490         

>>NP_001123478 (OMIM: 139259) eukaryotic peptide chain r  (636 aa)
 initn: 928 init1: 637 opt: 1162  Z-score: 1146.7  bits: 222.5 E(85289): 3.9e-57
Smith-Waterman score: 1167; 39.0% identity (68.4% similar) in 503 aa overlap (185-682:146-631)

          160       170       180       190       200       210    
pF1KE5 ESEIVPKVAKMTVSGKKQTMGFEVPGVSSEENGHSFHTPQKGPPIEDAIASSDVLETASK
                                     :::..  .:...   .. :. ..    .  
NP_001 RAAPVESSQEEQSLCEGSNSAVSMELSEPIENGETEMSPEESWEHKEEISEAEPGGGSLG
         120       130       140       150       160       170     

          220         230       240       250       260       270  
pF1KE5 SANPPHTI--QASEEQSSTPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAG
       .. ::.    .  ::.   : :        ... .     :    :. .:.: :::::::
NP_001 DGRPPEESAHEMMEEEEEIPKP--------KSVVAPPGAPK----KEHVNVVFIGHVDAG
         180       190               200           210       220   

            280       290       300       310       320       330  
pF1KE5 KSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTK
       :::. :...:: : ..:::..:::.:.:. .. ..  .:.:: . :::..: :..:: . 
NP_001 KSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAY
           230       240       250       260       270       280   

            340       350       360       370       380       390  
pF1KE5 FETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLL
       :::  : .:..::::::.:.:::: ::.:::.::::..: .::::.::: :::::::..:
NP_001 FETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAML
           290       300       310       320       330       340   

            400       410         420       430        440         
pF1KE5 VRSLGVTQLAVAVNKMDQ--VNWQQERFQEITGKLGHFLKQAGFK-ESDVGFIPTSGLSG
       ... :: .: : .::::.  :::..::..:   ::  :::..::. ..:. :.: :::.:
NP_001 AKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTG
           350       360       370       380       390       400   

     450       460       470       480       490       500         
pF1KE5 ENLITRSQSSELTKWYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKI
        ::   ...:..  :: :: ..  .:..   .::.: :.:: . : .::.:.   . ::.
NP_001 ANL---KEQSDFCPWYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGT--VVLGKL
              410       420       430       440       450          

     510       520       530       540       550       560         
pF1KE5 EAGYIQTGDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFC
       :.: :  :..:. :: ...  : ::   :  .: .: :..... : :..  .:  : :.:
NP_001 ESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILC
      460       470       480       490       500       510        

     570       580       590       600       610       620         
pF1KE5 GPKVPIKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTK
        :.   ..   : :.:.:.. .  :  :. ..:: .:  : . :  :: ...:..:: .:
NP_001 DPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSK
      520       530       540       550       560       570        

     630       640       650       660       670       680       
pF1KE5 KKPKFLTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE   
        .:.:. . :  ...:.:   : :: .::: ..::: ::  :.::: : : ..     
NP_001 TRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
      580       590       600       610       620       630      

>>NP_002085 (OMIM: 139259) eukaryotic peptide chain rele  (637 aa)
 initn: 928 init1: 637 opt: 1162  Z-score: 1146.7  bits: 222.5 E(85289): 3.9e-57
Smith-Waterman score: 1170; 37.3% identity (66.5% similar) in 549 aa overlap (139-682:110-632)

      110       120       130       140       150       160        
pF1KE5 KFDVQKALSGVLEQDRVQSLKDKNEATVSTGKIAKGKPVDSQTSRSESEIVPKVAKMTVS
                                     :. : :. .  ..:. :. .         :
NP_002 VHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAGGRAAPVESSQEEQSLCEG------S
      80        90       100       110       120       130         

      170       180       190       200       210       220        
pF1KE5 GKKQTMGFEVPGVSSEENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTI--QASE
       ..  .: .  : :   :::..  .:...   .. :. ..    .  .. ::.    .  :
NP_002 NSAVSMELSEPIV---ENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMME
           140          150       160       170       180       190

        230       240       250       260       270       280      
pF1KE5 EQSSTPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGN
       :.   : :        ... .     :    :. .:.: ::::::::::. :...:: : 
NP_002 EEEEIPKP--------KSVVAPPGAPK----KEHVNVVFIGHVDAGKSTIGGQIMYLTGM
                      200           210       220       230        

        290       300       310       320       330       340      
pF1KE5 INKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAP
       ..:::..:::.:.:. .. ..  .:.:: . :::..: :..:: . :::  : .:..:::
NP_002 VDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAP
      240       250       260       270       280       290        

        350       360       370       380       390       400      
pF1KE5 GHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVN
       :::.:.:::: ::.:::.::::..: .::::.::: :::::::..:... :: .: : .:
NP_002 GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLIN
      300       310       320       330       340       350        

        410         420       430        440       450       460   
pF1KE5 KMDQ--VNWQQERFQEITGKLGHFLKQAGFK-ESDVGFIPTSGLSGENLITRSQSSELTK
       :::.  :::..::..:   ::  :::..::. ..:. :.: :::.: ::   ...:..  
NP_002 KMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANL---KEQSDFCP
      360       370       380       390       400          410     

           470       480       490       500       510       520   
pF1KE5 WYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAM
       :: :: ..  .:..   .::.: :.:: . : .::.:.   . ::.:.: :  :..:. :
NP_002 WYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGT--VVLGKLESGSICKGQQLVMM
         420       430       440       450         460       470   

           530       540       550       560       570       580   
pF1KE5 PPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRA
       : ...  : ::   :  .: .: :..... : :..  .:  : :.: :.   ..   : :
NP_002 PNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDA
           480       490       500       510       520       530   

           590       600       610       620       630       640   
pF1KE5 RILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALV
       .:.:.. .  :  :. ..:: .:  : . :  :: ...:..:: .: .:.:. . :  ..
NP_002 QIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIA
           540       550       560       570       580       590   

           650       660       670       680       
pF1KE5 ELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE   
       .:.:   : :: .::: ..::: ::  :.::: : : ..     
NP_002 RLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
           600       610       620       630       

>>NP_001138679 (OMIM: 612450) HBS1-like protein isoform   (632 aa)
 initn: 974 init1: 947 opt: 947  Z-score: 935.6  bits: 183.4 E(85289): 2.3e-45
Smith-Waterman score: 947; 100.0% identity (100.0% similar) in 144 aa overlap (1-144:1-144)

               10        20        30        40        50        60
pF1KE5 MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVEPVEEYDYED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVEPVEEYDYED
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 LKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 EQDRVQSLKDKNEATVSTGKIAKGKPVDSQTSRSESEIVPKVAKMTVSGKKQTMGFEVPG
       ::::::::::::::::::::::::                                    
NP_001 EQDRVQSLKDKNEATVSTGKIAKGVLFSSSEVSADNVQSSYPQSANHLDYSSKPFDFASS
              130       140       150       160       170       180

>>NP_001393 (OMIM: 130590) elongation factor 1-alpha 1 [  (462 aa)
 initn: 945 init1: 628 opt: 745  Z-score: 739.1  bits: 146.6 E(85289): 2e-34
Smith-Waterman score: 1083; 39.7% identity (68.7% similar) in 438 aa overlap (258-682:5-441)

       230       240       250       260       270       280       
pF1KE5 QSSTPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNI
                                     :  .:.:::::::.::::  ::..:  :.:
NP_001                           MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI
                                         10        20        30    

       290       300       310       320       330       340       
pF1KE5 NKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPG
       .:::..:.:.:. . ::.:: ::::::.   :::::.:.:... ::::.   .:..::::
NP_001 DKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPG
           40        50        60        70        80        90    

       350       360       370       380       390       400       
pF1KE5 HKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNK
       :.::: :::::..::: :::.: :. ::::::.  .::::::.::. .::: :: :.:::
NP_001 HRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNK
          100       110       120       130       140       150    

       410         420       430       440       450       460     
pF1KE5 MDQVN--WQQERFQEITGKLGHFLKQAGFKESDVGFIPTSGLSGENLITRSQSSELTKWY
       ::...  ..:.:..::. ... ..:. :.. . :.:.: :: .:.:..  : .    : .
NP_001 MDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGW
          160       170       180       190       200       210    

                  470       480       490       500       510      
pF1KE5 K---------GLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQT
       :         :  ::: .: . :: :  :::.:: ..::.:  : :   .:..:.: .. 
NP_001 KVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKP
          220       230       240       250       260       270    

        520       530       540       550       560       570      
pF1KE5 GDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKV--P
       :  .   : : :  ::.. .: : .. :  ::.:.... ....  .  : .    :   :
NP_001 GMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPP
          280       290       300       310       320       330    

          580       590       600       610       620       630    
pF1KE5 IKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKF
       ..: . : :...:.:    :. :.  .:  .:.     . .:   ... .:.  .  :::
NP_001 MEA-AGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKF
           340       350       360       370       380       390   

          640       650       660       670       680              
pF1KE5 LTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE          
       : .:. :.:..   .:. .: ..:.  :::: .:   .:.:.::.  .            
NP_001 LKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKKAAGAGKVTK
           400       410       420       430       440       450   

NP_001 SAQKAQKAK
           460  

>>XP_011533816 (OMIM: 130590) PREDICTED: elongation fact  (462 aa)
 initn: 945 init1: 628 opt: 745  Z-score: 739.1  bits: 146.6 E(85289): 2e-34
Smith-Waterman score: 1083; 39.7% identity (68.7% similar) in 438 aa overlap (258-682:5-441)

       230       240       250       260       270       280       
pF1KE5 QSSTPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNI
                                     :  .:.:::::::.::::  ::..:  :.:
XP_011                           MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI
                                         10        20        30    

       290       300       310       320       330       340       
pF1KE5 NKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPG
       .:::..:.:.:. . ::.:: ::::::.   :::::.:.:... ::::.   .:..::::
XP_011 DKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPG
           40        50        60        70        80        90    

       350       360       370       380       390       400       
pF1KE5 HKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNK
       :.::: :::::..::: :::.: :. ::::::.  .::::::.::. .::: :: :.:::
XP_011 HRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNK
          100       110       120       130       140       150    

       410         420       430       440       450       460     
pF1KE5 MDQVN--WQQERFQEITGKLGHFLKQAGFKESDVGFIPTSGLSGENLITRSQSSELTKWY
       ::...  ..:.:..::. ... ..:. :.. . :.:.: :: .:.:..  : .    : .
XP_011 MDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGW
          160       170       180       190       200       210    

                  470       480       490       500       510      
pF1KE5 K---------GLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQT
       :         :  ::: .: . :: :  :::.:: ..::.:  : :   .:..:.: .. 
XP_011 KVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKP
          220       230       240       250       260       270    

        520       530       540       550       560       570      
pF1KE5 GDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKV--P
       :  .   : : :  ::.. .: : .. :  ::.:.... ....  .  : .    :   :
XP_011 GMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPP
          280       290       300       310       320       330    

          580       590       600       610       620       630    
pF1KE5 IKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKF
       ..: . : :...:.:    :. :.  .:  .:.     . .:   ... .:.  .  :::
XP_011 MEA-AGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKF
           340       350       360       370       380       390   

          640       650       660       670       680              
pF1KE5 LTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE          
       : .:. :.:..   .:. .: ..:.  :::: .:   .:.:.::.  .            
XP_011 LKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKKAAGAGKVTK
           400       410       420       430       440       450   

XP_011 SAQKAQKAK
           460  

>>NP_001949 (OMIM: 602959,616393,616409) elongation fact  (463 aa)
 initn: 939 init1: 632 opt: 739  Z-score: 733.2  bits: 145.5 E(85289): 4.2e-34
Smith-Waterman score: 1079; 39.3% identity (69.3% similar) in 440 aa overlap (258-684:5-443)

       230       240       250       260       270       280       
pF1KE5 QSSTPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNI
                                     :  .:.:::::::.::::  ::..:  :.:
NP_001                           MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI
                                         10        20        30    

       290       300       310       320       330       340       
pF1KE5 NKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPG
       .:::..:.:.:. . ::.:: ::::::.   :::::.:.:... :::::   ::..::::
NP_001 DKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETTKYYITIIDAPG
           40        50        60        70        80        90    

       350       360       370       380       390       400       
pF1KE5 HKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNK
       :.::: :::::..::: :::.: :. ::::::.  .::::::.::. .::: :: :.:::
NP_001 HRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNK
          100       110       120       130       140       150    

       410         420       430       440       450       460     
pF1KE5 MDQVN--WQQERFQEITGKLGHFLKQAGFKESDVGFIPTSGLSGENLITRSQSSELTKWY
       ::...  ....:..::. ... ..:. :.. . : :.: ::  :.:..  : .    : .
NP_001 MDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGW
          160       170       180       190       200       210    

                  470       480       490       500       510      
pF1KE5 K---------GLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQT
       :         :. ::: .:.. :: :  :::.:: ..::.:  : :   .:..:.: .. 
NP_001 KVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRP
          220       230       240       250       260       270    

        520       530       540       550       560       570      
pF1KE5 GDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKV--P
       :  .   : : :  ::.. .: : .. :  ::.:.... ....  :  : . :: .   :
NP_001 GMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNV-CGDSKSDP
          280       290       300       310       320        330   

          580       590       600       610       620       630    
pF1KE5 IKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKF
        .  ..: ....:.:    :. :.  ..  .:.     . .:   ... .:.  . .:: 
NP_001 PQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKS
           340       350       360       370       380       390   

          640       650       660       670       680              
pF1KE5 LTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE          
       : .:. :.::.   .:. .: ....  :::: .:   .:.:.::. ....          
NP_001 LKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKKSGGAGKVTK
           400       410       420       430       440       450   

NP_001 SAQKAQKAGK
           460   




684 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 06:36:09 2016 done: Tue Nov  8 06:36:10 2016
 Total Scan time:  7.340 Total Display time:  0.120

Function used was FASTA [36.3.4 Apr, 2011]
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