FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5782, 684 aa 1>>>pF1KE5782 684 - 684 aa - 684 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3073+/-0.000443; mu= 16.1019+/- 0.028 mean_var=103.6670+/-20.717, 0's: 0 Z-trim(111.5): 59 B-trim: 0 in 0/53 Lambda= 0.125966 statistics sampled from 20122 (20170) to 20122 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.597), E-opt: 0.2 (0.236), width: 16 Scan time: 7.340 The best scores are: opt bits E(85289) NP_006611 (OMIM: 612450) HBS1-like protein isoform ( 684) 4472 824.0 0 NP_001138630 (OMIM: 612450) HBS1-like protein isof ( 642) 3954 729.9 7.2e-210 NP_060564 (OMIM: 300418) eukaryotic peptide chain ( 628) 1175 224.8 7.5e-58 NP_001123479 (OMIM: 139259) eukaryotic peptide cha ( 499) 1162 222.4 3.2e-57 NP_001123478 (OMIM: 139259) eukaryotic peptide cha ( 636) 1162 222.5 3.9e-57 NP_002085 (OMIM: 139259) eukaryotic peptide chain ( 637) 1162 222.5 3.9e-57 NP_001138679 (OMIM: 612450) HBS1-like protein isof ( 632) 947 183.4 2.3e-45 NP_001393 (OMIM: 130590) elongation factor 1-alpha ( 462) 745 146.6 2e-34 XP_011533816 (OMIM: 130590) PREDICTED: elongation ( 462) 745 146.6 2e-34 NP_001949 (OMIM: 602959,616393,616409) elongation ( 463) 739 145.5 4.2e-34 XP_016865681 (OMIM: 612450) PREDICTED: HBS1-like p ( 590) 429 89.3 4.6e-17 XP_016884592 (OMIM: 602245) PREDICTED: GTP-binding ( 614) 300 65.8 5.5e-10 NP_004277 (OMIM: 602245) GTP-binding protein 1 [Ho ( 669) 300 65.9 5.9e-10 XP_016884589 (OMIM: 602245) PREDICTED: GTP-binding ( 726) 300 65.9 6.3e-10 XP_011544230 (OMIM: 602389,610678) PREDICTED: elon ( 427) 266 59.5 3e-08 XP_016879108 (OMIM: 602389,610678) PREDICTED: elon ( 455) 266 59.6 3.1e-08 NP_003312 (OMIM: 602389,610678) elongation factor ( 455) 266 59.6 3.1e-08 XP_016884591 (OMIM: 602245) PREDICTED: GTP-binding ( 622) 226 52.4 6.2e-06 XP_016884590 (OMIM: 602245) PREDICTED: GTP-binding ( 684) 226 52.4 6.7e-06 XP_011528839 (OMIM: 602245) PREDICTED: GTP-binding ( 703) 226 52.4 6.8e-06 XP_016884588 (OMIM: 602245) PREDICTED: GTP-binding ( 734) 226 52.4 7e-06 XP_016862469 (OMIM: 607695) PREDICTED: selenocyste ( 491) 175 43.0 0.0032 XP_016862468 (OMIM: 607695) PREDICTED: selenocyste ( 525) 175 43.1 0.0033 XP_016862467 (OMIM: 607695) PREDICTED: selenocyste ( 536) 175 43.1 0.0034 XP_016862466 (OMIM: 607695) PREDICTED: selenocyste ( 553) 175 43.1 0.0035 XP_016862465 (OMIM: 607695) PREDICTED: selenocyste ( 571) 175 43.1 0.0036 XP_016862464 (OMIM: 607695) PREDICTED: selenocyste ( 575) 175 43.1 0.0036 NP_068756 (OMIM: 607695) selenocysteine-specific e ( 596) 175 43.1 0.0037 NP_001273145 (OMIM: 607434) GTP-binding protein 2 ( 514) 172 42.5 0.0048 NP_061969 (OMIM: 607434) GTP-binding protein 2 iso ( 602) 172 42.6 0.0054 XP_016866465 (OMIM: 607434) PREDICTED: GTP-binding ( 493) 167 41.6 0.0087 >>NP_006611 (OMIM: 612450) HBS1-like protein isoform 1 [ (684 aa) initn: 4472 init1: 4472 opt: 4472 Z-score: 4397.2 bits: 824.0 E(85289): 0 Smith-Waterman score: 4472; 100.0% identity (100.0% similar) in 684 aa overlap (1-684:1-684) 10 20 30 40 50 60 pF1KE5 MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVEPVEEYDYED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVEPVEEYDYED 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 LKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 LKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 EQDRVQSLKDKNEATVSTGKIAKGKPVDSQTSRSESEIVPKVAKMTVSGKKQTMGFEVPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 EQDRVQSLKDKNEATVSTGKIAKGKPVDSQTSRSESEIVPKVAKMTVSGKKQTMGFEVPG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 VSSEENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTIQASEEQSSTPAPVKKSGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 VSSEENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTIQASEEQSSTPAPVKKSGK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 LRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 LRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 KAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 KAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 QADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 QADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 ITGKLGHFLKQAGFKESDVGFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 ITGKLGHFLKQAGFKESDVGFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKPP 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 QRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTVKGITLHDEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 QRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTVKGITLHDEP 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 VDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRARILIFNIEIPITKGFPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 VDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRARILIFNIEIPITKGFPV 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE5 LLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 LLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFK 610 620 630 640 650 660 670 680 pF1KE5 ELGRFMLRYGGSTIAAGVVTEIKE :::::::::::::::::::::::: NP_006 ELGRFMLRYGGSTIAAGVVTEIKE 670 680 >>NP_001138630 (OMIM: 612450) HBS1-like protein isoform (642 aa) initn: 3954 init1: 3954 opt: 3954 Z-score: 3888.8 bits: 729.9 E(85289): 7.2e-210 Smith-Waterman score: 4102; 93.9% identity (93.9% similar) in 684 aa overlap (1-684:1-642) 10 20 30 40 50 60 pF1KE5 MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVEPVEEYDYED ::::::::::::::::::::::::::::::::::::: NP_001 MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTA----------------------- 10 20 30 70 80 90 100 110 120 pF1KE5 LKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL ::::::::::::::::::::::::::::::::::::::::: NP_001 -------------------RLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL 40 50 60 70 130 140 150 160 170 180 pF1KE5 EQDRVQSLKDKNEATVSTGKIAKGKPVDSQTSRSESEIVPKVAKMTVSGKKQTMGFEVPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EQDRVQSLKDKNEATVSTGKIAKGKPVDSQTSRSESEIVPKVAKMTVSGKKQTMGFEVPG 80 90 100 110 120 130 190 200 210 220 230 240 pF1KE5 VSSEENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTIQASEEQSSTPAPVKKSGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VSSEENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTIQASEEQSSTPAPVKKSGK 140 150 160 170 180 190 250 260 270 280 290 300 pF1KE5 LRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESK 200 210 220 230 240 250 310 320 330 340 350 360 pF1KE5 KAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAA 260 270 280 290 300 310 370 380 390 400 410 420 pF1KE5 QADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQE 320 330 340 350 360 370 430 440 450 460 470 480 pF1KE5 ITGKLGHFLKQAGFKESDVGFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ITGKLGHFLKQAGFKESDVGFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKPP 380 390 400 410 420 430 490 500 510 520 530 540 pF1KE5 QRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTVKGITLHDEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTVKGITLHDEP 440 450 460 470 480 490 550 560 570 580 590 600 pF1KE5 VDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRARILIFNIEIPITKGFPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRARILIFNIEIPITKGFPV 500 510 520 530 540 550 610 620 630 640 650 660 pF1KE5 LLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFK 560 570 580 590 600 610 670 680 pF1KE5 ELGRFMLRYGGSTIAAGVVTEIKE :::::::::::::::::::::::: NP_001 ELGRFMLRYGGSTIAAGVVTEIKE 620 630 640 >>NP_060564 (OMIM: 300418) eukaryotic peptide chain rele (628 aa) initn: 900 init1: 636 opt: 1175 Z-score: 1159.5 bits: 224.8 E(85289): 7.5e-58 Smith-Waterman score: 1179; 37.9% identity (67.9% similar) in 546 aa overlap (140-682:103-623) 110 120 130 140 150 160 pF1KE5 FDVQKALSGVLEQDRVQSLKDKNEATVSTGKIAKGKPVDSQTSRSESEIVPKVAKMTVSG ....: ::. :: : : :. . :. NP_060 LRGPTQPPTLPAGSGSNDETCTGAGYPQGKRMGRGAPVEP--SREE----PLVS-LEGSN 80 90 100 110 120 170 180 190 200 210 220 pF1KE5 KKQTMGFEVPGVSSEENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTIQASEEQS . :: . : : :::. . ... .. .. .: ...::. ....:. NP_060 SAVTMELSEPVV---ENGEVEMALEESWEHSKEVSEAEPGGGSSGDSGPPE--ESGQEMM 130 140 150 160 170 180 230 240 250 260 270 280 pF1KE5 STPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINK ..:: ... : . : :. .:.: ::::::::::. :....: : ..: NP_060 EEKEEIRKS----KSVIVPSGAPK----KEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDK 190 200 210 220 230 290 300 310 320 330 340 pF1KE5 RTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHK ::..:::.:.:. .. .. .:.:: . :::..: :..:: . ::: : .:..:::::: NP_060 RTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHK 240 250 260 270 280 290 350 360 370 380 390 400 pF1KE5 DFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMD .:.:::: ::.:::.::::..: .::::.::: :::::::..:... :: .: : .:::: NP_060 SFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMD 300 310 320 330 340 350 410 420 430 440 450 460 pF1KE5 Q--VNWQQERFQEITGKLGHFLKQAGFK-ESDVGFIPTSGLSGENLITRSQSSELTKWYK . :::. ::..: :: :::..::. ..:. :.: :::.: :. ...:.. :: NP_060 DPTVNWSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANI---KEQSDFCPWYT 360 370 380 390 400 470 480 490 500 510 520 pF1KE5 GLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPN :: .. .:.. .:::: :.:: . : .::.:. . ::.:.: : :..:. :: . NP_060 GLPFIPYLDNLPNFNRSIDGPIRLPIVDKYKDMGT--VVLGKLESGSIFKGQQLVMMPNK 410 420 430 440 450 460 530 540 550 560 570 580 pF1KE5 ETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRARIL .. : :: : .:..: :..... : :.. .: : :.: :. .. : ..:. NP_060 HNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSNLCHSGRTFDVQIV 470 480 490 500 510 520 590 600 610 620 630 640 pF1KE5 IFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQ :.. . : :. ..:: .: : . : :::...:..:: .: .:.:. . : ...:. NP_060 IIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLR 530 540 550 560 570 580 650 660 670 680 pF1KE5 TQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE : : :: .::: ..::: :: :.::: : : .. NP_060 TAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 590 600 610 620 >>NP_001123479 (OMIM: 139259) eukaryotic peptide chain r (499 aa) initn: 951 init1: 637 opt: 1162 Z-score: 1148.2 bits: 222.4 E(85289): 3.2e-57 Smith-Waterman score: 1167; 39.0% identity (68.4% similar) in 503 aa overlap (185-682:9-494) 160 170 180 190 200 210 pF1KE5 ESEIVPKVAKMTVSGKKQTMGFEVPGVSSEENGHSFHTPQKGPPIEDAIASSDVLETASK :::.. .:... .. :. .. . NP_001 MELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLG 10 20 30 220 230 240 250 260 270 pF1KE5 SANPPHTI--QASEEQSSTPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAG .. ::. . ::. : : ... . : :. .:.: ::::::: NP_001 DGRPPEESAHEMMEEEEEIPKP--------KSVVAPPGAPK----KEHVNVVFIGHVDAG 40 50 60 70 80 280 290 300 310 320 330 pF1KE5 KSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTK :::. :...:: : ..:::..:::.:.:. .. .. .:.:: . :::..: :..:: . NP_001 KSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAY 90 100 110 120 130 140 340 350 360 370 380 390 pF1KE5 FETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLL ::: : .:..::::::.:.:::: ::.:::.::::..: .::::.::: :::::::..: NP_001 FETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAML 150 160 170 180 190 200 400 410 420 430 440 pF1KE5 VRSLGVTQLAVAVNKMDQ--VNWQQERFQEITGKLGHFLKQAGFK-ESDVGFIPTSGLSG ... :: .: : .::::. :::..::..: :: :::..::. ..:. :.: :::.: NP_001 AKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTG 210 220 230 240 250 260 450 460 470 480 490 500 pF1KE5 ENLITRSQSSELTKWYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKI :: ...:.. :: :: .. .:.. .::.: :.:: . : .::.:. . ::. NP_001 ANL---KEQSDFCPWYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGT--VVLGKL 270 280 290 300 310 320 510 520 530 540 550 560 pF1KE5 EAGYIQTGDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFC :.: : :..:. :: ... : :: : .: .: :..... : :.. .: : :.: NP_001 ESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILC 330 340 350 360 370 380 570 580 590 600 610 620 pF1KE5 GPKVPIKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTK :. .. : :.:.:.. . : :. ..:: .: : . : :: ...:..:: .: NP_001 DPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSK 390 400 410 420 430 440 630 640 650 660 670 680 pF1KE5 KKPKFLTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE .:.:. . : ...:.: : :: .::: ..::: :: :.::: : : .. NP_001 TRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 450 460 470 480 490 >>NP_001123478 (OMIM: 139259) eukaryotic peptide chain r (636 aa) initn: 928 init1: 637 opt: 1162 Z-score: 1146.7 bits: 222.5 E(85289): 3.9e-57 Smith-Waterman score: 1167; 39.0% identity (68.4% similar) in 503 aa overlap (185-682:146-631) 160 170 180 190 200 210 pF1KE5 ESEIVPKVAKMTVSGKKQTMGFEVPGVSSEENGHSFHTPQKGPPIEDAIASSDVLETASK :::.. .:... .. :. .. . NP_001 RAAPVESSQEEQSLCEGSNSAVSMELSEPIENGETEMSPEESWEHKEEISEAEPGGGSLG 120 130 140 150 160 170 220 230 240 250 260 270 pF1KE5 SANPPHTI--QASEEQSSTPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAG .. ::. . ::. : : ... . : :. .:.: ::::::: NP_001 DGRPPEESAHEMMEEEEEIPKP--------KSVVAPPGAPK----KEHVNVVFIGHVDAG 180 190 200 210 220 280 290 300 310 320 330 pF1KE5 KSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTK :::. :...:: : ..:::..:::.:.:. .. .. .:.:: . :::..: :..:: . NP_001 KSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAY 230 240 250 260 270 280 340 350 360 370 380 390 pF1KE5 FETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLL ::: : .:..::::::.:.:::: ::.:::.::::..: .::::.::: :::::::..: NP_001 FETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAML 290 300 310 320 330 340 400 410 420 430 440 pF1KE5 VRSLGVTQLAVAVNKMDQ--VNWQQERFQEITGKLGHFLKQAGFK-ESDVGFIPTSGLSG ... :: .: : .::::. :::..::..: :: :::..::. ..:. :.: :::.: NP_001 AKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTG 350 360 370 380 390 400 450 460 470 480 490 500 pF1KE5 ENLITRSQSSELTKWYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKI :: ...:.. :: :: .. .:.. .::.: :.:: . : .::.:. . ::. NP_001 ANL---KEQSDFCPWYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGT--VVLGKL 410 420 430 440 450 510 520 530 540 550 560 pF1KE5 EAGYIQTGDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFC :.: : :..:. :: ... : :: : .: .: :..... : :.. .: : :.: NP_001 ESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILC 460 470 480 490 500 510 570 580 590 600 610 620 pF1KE5 GPKVPIKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTK :. .. : :.:.:.. . : :. ..:: .: : . : :: ...:..:: .: NP_001 DPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSK 520 530 540 550 560 570 630 640 650 660 670 680 pF1KE5 KKPKFLTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE .:.:. . : ...:.: : :: .::: ..::: :: :.::: : : .. NP_001 TRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 580 590 600 610 620 630 >>NP_002085 (OMIM: 139259) eukaryotic peptide chain rele (637 aa) initn: 928 init1: 637 opt: 1162 Z-score: 1146.7 bits: 222.5 E(85289): 3.9e-57 Smith-Waterman score: 1170; 37.3% identity (66.5% similar) in 549 aa overlap (139-682:110-632) 110 120 130 140 150 160 pF1KE5 KFDVQKALSGVLEQDRVQSLKDKNEATVSTGKIAKGKPVDSQTSRSESEIVPKVAKMTVS :. : :. . ..:. :. . : NP_002 VHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAGGRAAPVESSQEEQSLCEG------S 80 90 100 110 120 130 170 180 190 200 210 220 pF1KE5 GKKQTMGFEVPGVSSEENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTI--QASE .. .: . : : :::.. .:... .. :. .. . .. ::. . : NP_002 NSAVSMELSEPIV---ENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMME 140 150 160 170 180 190 230 240 250 260 270 280 pF1KE5 EQSSTPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGN :. : : ... . : :. .:.: ::::::::::. :...:: : NP_002 EEEEIPKP--------KSVVAPPGAPK----KEHVNVVFIGHVDAGKSTIGGQIMYLTGM 200 210 220 230 290 300 310 320 330 340 pF1KE5 INKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAP ..:::..:::.:.:. .. .. .:.:: . :::..: :..:: . ::: : .:..::: NP_002 VDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAP 240 250 260 270 280 290 350 360 370 380 390 400 pF1KE5 GHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVN :::.:.:::: ::.:::.::::..: .::::.::: :::::::..:... :: .: : .: NP_002 GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLIN 300 310 320 330 340 350 410 420 430 440 450 460 pF1KE5 KMDQ--VNWQQERFQEITGKLGHFLKQAGFK-ESDVGFIPTSGLSGENLITRSQSSELTK :::. :::..::..: :: :::..::. ..:. :.: :::.: :: ...:.. NP_002 KMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANL---KEQSDFCP 360 370 380 390 400 410 470 480 490 500 510 520 pF1KE5 WYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAM :: :: .. .:.. .::.: :.:: . : .::.:. . ::.:.: : :..:. : NP_002 WYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGT--VVLGKLESGSICKGQQLVMM 420 430 440 450 460 470 530 540 550 560 570 580 pF1KE5 PPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRA : ... : :: : .: .: :..... : :.. .: : :.: :. .. : : NP_002 PNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDA 480 490 500 510 520 530 590 600 610 620 630 640 pF1KE5 RILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALV .:.:.. . : :. ..:: .: : . : :: ...:..:: .: .:.:. . : .. NP_002 QIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIA 540 550 560 570 580 590 650 660 670 680 pF1KE5 ELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE .:.: : :: .::: ..::: :: :.::: : : .. NP_002 RLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 600 610 620 630 >>NP_001138679 (OMIM: 612450) HBS1-like protein isoform (632 aa) initn: 974 init1: 947 opt: 947 Z-score: 935.6 bits: 183.4 E(85289): 2.3e-45 Smith-Waterman score: 947; 100.0% identity (100.0% similar) in 144 aa overlap (1-144:1-144) 10 20 30 40 50 60 pF1KE5 MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVEPVEEYDYED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVEPVEEYDYED 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 LKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 EQDRVQSLKDKNEATVSTGKIAKGKPVDSQTSRSESEIVPKVAKMTVSGKKQTMGFEVPG :::::::::::::::::::::::: NP_001 EQDRVQSLKDKNEATVSTGKIAKGVLFSSSEVSADNVQSSYPQSANHLDYSSKPFDFASS 130 140 150 160 170 180 >>NP_001393 (OMIM: 130590) elongation factor 1-alpha 1 [ (462 aa) initn: 945 init1: 628 opt: 745 Z-score: 739.1 bits: 146.6 E(85289): 2e-34 Smith-Waterman score: 1083; 39.7% identity (68.7% similar) in 438 aa overlap (258-682:5-441) 230 240 250 260 270 280 pF1KE5 QSSTPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNI : .:.:::::::.:::: ::..: :.: NP_001 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI 10 20 30 290 300 310 320 330 340 pF1KE5 NKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPG .:::..:.:.:. . ::.:: ::::::. :::::.:.:... ::::. .:..:::: NP_001 DKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPG 40 50 60 70 80 90 350 360 370 380 390 400 pF1KE5 HKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNK :.::: :::::..::: :::.: :. ::::::. .::::::.::. .::: :: :.::: NP_001 HRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNK 100 110 120 130 140 150 410 420 430 440 450 460 pF1KE5 MDQVN--WQQERFQEITGKLGHFLKQAGFKESDVGFIPTSGLSGENLITRSQSSELTKWY ::... ..:.:..::. ... ..:. :.. . :.:.: :: .:.:.. : . : . NP_001 MDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGW 160 170 180 190 200 210 470 480 490 500 510 pF1KE5 K---------GLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQT : : ::: .: . :: : :::.:: ..::.: : : .:..:.: .. NP_001 KVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKP 220 230 240 250 260 270 520 530 540 550 560 570 pF1KE5 GDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKV--P : . : : : ::.. .: : .. : ::.:.... .... . : . : : NP_001 GMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPP 280 290 300 310 320 330 580 590 600 610 620 630 pF1KE5 IKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKF ..: . : :...:.: :. :. .: .:. . .: ... .:. . ::: NP_001 MEA-AGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKF 340 350 360 370 380 390 640 650 660 670 680 pF1KE5 LTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE : .:. :.:.. .:. .: ..:. :::: .: .:.:.::. . NP_001 LKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKKAAGAGKVTK 400 410 420 430 440 450 NP_001 SAQKAQKAK 460 >>XP_011533816 (OMIM: 130590) PREDICTED: elongation fact (462 aa) initn: 945 init1: 628 opt: 745 Z-score: 739.1 bits: 146.6 E(85289): 2e-34 Smith-Waterman score: 1083; 39.7% identity (68.7% similar) in 438 aa overlap (258-682:5-441) 230 240 250 260 270 280 pF1KE5 QSSTPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNI : .:.:::::::.:::: ::..: :.: XP_011 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI 10 20 30 290 300 310 320 330 340 pF1KE5 NKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPG .:::..:.:.:. . ::.:: ::::::. :::::.:.:... ::::. .:..:::: XP_011 DKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPG 40 50 60 70 80 90 350 360 370 380 390 400 pF1KE5 HKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNK :.::: :::::..::: :::.: :. ::::::. .::::::.::. .::: :: :.::: XP_011 HRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNK 100 110 120 130 140 150 410 420 430 440 450 460 pF1KE5 MDQVN--WQQERFQEITGKLGHFLKQAGFKESDVGFIPTSGLSGENLITRSQSSELTKWY ::... ..:.:..::. ... ..:. :.. . :.:.: :: .:.:.. : . : . XP_011 MDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGW 160 170 180 190 200 210 470 480 490 500 510 pF1KE5 K---------GLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQT : : ::: .: . :: : :::.:: ..::.: : : .:..:.: .. XP_011 KVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKP 220 230 240 250 260 270 520 530 540 550 560 570 pF1KE5 GDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKV--P : . : : : ::.. .: : .. : ::.:.... .... . : . : : XP_011 GMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPP 280 290 300 310 320 330 580 590 600 610 620 630 pF1KE5 IKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKF ..: . : :...:.: :. :. .: .:. . .: ... .:. . ::: XP_011 MEA-AGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKF 340 350 360 370 380 390 640 650 660 670 680 pF1KE5 LTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE : .:. :.:.. .:. .: ..:. :::: .: .:.:.::. . XP_011 LKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKKAAGAGKVTK 400 410 420 430 440 450 XP_011 SAQKAQKAK 460 >>NP_001949 (OMIM: 602959,616393,616409) elongation fact (463 aa) initn: 939 init1: 632 opt: 739 Z-score: 733.2 bits: 145.5 E(85289): 4.2e-34 Smith-Waterman score: 1079; 39.3% identity (69.3% similar) in 440 aa overlap (258-684:5-443) 230 240 250 260 270 280 pF1KE5 QSSTPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNI : .:.:::::::.:::: ::..: :.: NP_001 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI 10 20 30 290 300 310 320 330 340 pF1KE5 NKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPG .:::..:.:.:. . ::.:: ::::::. :::::.:.:... ::::: ::..:::: NP_001 DKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETTKYYITIIDAPG 40 50 60 70 80 90 350 360 370 380 390 400 pF1KE5 HKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNK :.::: :::::..::: :::.: :. ::::::. .::::::.::. .::: :: :.::: NP_001 HRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNK 100 110 120 130 140 150 410 420 430 440 450 460 pF1KE5 MDQVN--WQQERFQEITGKLGHFLKQAGFKESDVGFIPTSGLSGENLITRSQSSELTKWY ::... ....:..::. ... ..:. :.. . : :.: :: :.:.. : . : . NP_001 MDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGW 160 170 180 190 200 210 470 480 490 500 510 pF1KE5 K---------GLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQT : :. ::: .:.. :: : :::.:: ..::.: : : .:..:.: .. NP_001 KVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRP 220 230 240 250 260 270 520 530 540 550 560 570 pF1KE5 GDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKV--P : . : : : ::.. .: : .. : ::.:.... .... : : . :: . : NP_001 GMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNV-CGDSKSDP 280 290 300 310 320 330 580 590 600 610 620 630 pF1KE5 IKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKF . ..: ....:.: :. :. .. .:. . .: ... .:. . .:: NP_001 PQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKS 340 350 360 370 380 390 640 650 660 670 680 pF1KE5 LTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE : .:. :.::. .:. .: .... :::: .: .:.:.::. .... NP_001 LKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKKSGGAGKVTK 400 410 420 430 440 450 NP_001 SAQKAQKAGK 460 684 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 06:36:09 2016 done: Tue Nov 8 06:36:10 2016 Total Scan time: 7.340 Total Display time: 0.120 Function used was FASTA [36.3.4 Apr, 2011]