Result of FASTA (ccds) for pFN21AE5188
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE5188, 129 aa
  1>>>pF1KE5188 129 - 129 aa - 129 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.9588+/-0.000558; mu= 12.6253+/- 0.034
 mean_var=54.7398+/-10.699, 0's: 0 Z-trim(112.1): 16  B-trim: 0 in 0/52
 Lambda= 0.173350
 statistics sampled from 12881 (12895) to 12881 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.774), E-opt: 0.2 (0.396), width:  16
 Scan time:  1.760

The best scores are:                                      opt bits E(32554)
CCDS4948.1 GSTA4 gene_id:2941|Hs108|chr6           ( 222)  838 216.7 5.5e-57
CCDS4944.1 GSTA2 gene_id:2939|Hs108|chr6           ( 222)  412 110.2 6.5e-25
CCDS4945.1 GSTA1 gene_id:2938|Hs108|chr6           ( 222)  397 106.4 8.7e-24
CCDS4947.1 GSTA3 gene_id:2940|Hs108|chr6           ( 222)  395 105.9 1.2e-23
CCDS4946.1 GSTA5 gene_id:221357|Hs108|chr6         ( 222)  377 101.4 2.8e-22


>>CCDS4948.1 GSTA4 gene_id:2941|Hs108|chr6                (222 aa)
 initn: 838 init1: 838 opt: 838  Z-score: 1136.6  bits: 216.7 E(32554): 5.5e-57
Smith-Waterman score: 838; 100.0% identity (100.0% similar) in 129 aa overlap (1-129:94-222)

                                             10        20        30
pF1KE5                               MYVEGTLDLLELLIMHPFLKPDDQQKEVVN
                                     ::::::::::::::::::::::::::::::
CCDS49 KLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKEVVN
            70        80        90       100       110       120   

               40        50        60        70        80        90
pF1KE5 MAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 MAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQE
           130       140       150       160       170       180   

              100       110       120         
pF1KE5 YTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIFRP
       :::::::::::::::::::::::::::::::::::::::
CCDS49 YTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIFRP
           190       200       210       220  

>>CCDS4944.1 GSTA2 gene_id:2939|Hs108|chr6                (222 aa)
 initn: 412 init1: 412 opt: 412  Z-score: 560.8  bits: 110.2 E(32554): 6.5e-25
Smith-Waterman score: 412; 43.8% identity (78.1% similar) in 128 aa overlap (1-128:94-221)

                                             10        20        30
pF1KE5                               MYVEGTLDLLELLIMHPFLKPDDQQKEVVN
                                     ::.::  :: :.... :: .:..:. ... 
CCDS49 KLVQTRAILNYIASKYNLYGKDIKEKALIDMYIEGIADLGEMILLLPFSQPEEQDAKLAL
            70        80        90       100       110       120   

               40        50        60        70        80        90
pF1KE5 MAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQE
       . .:.  ::::.:::.:..:::..::::.:: ::. :.. .  .::   ...:.::.:. 
CCDS49 IQEKTKNRYFPAFEKVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDSSLISSFPLLKA
           130       140       150       160       170       180   

              100       110       120         
pF1KE5 YTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIFRP
         ...::.::.:.::.::: .::: ::  ..   .::: 
CCDS49 LKTRISNLPTVKKFLQPGSPRKPPMDEKSLEESRKIFRF
           190       200       210       220  

>>CCDS4945.1 GSTA1 gene_id:2938|Hs108|chr6                (222 aa)
 initn: 397 init1: 397 opt: 397  Z-score: 540.5  bits: 106.4 E(32554): 8.7e-24
Smith-Waterman score: 397; 42.2% identity (76.6% similar) in 128 aa overlap (1-128:94-221)

                                             10        20        30
pF1KE5                               MYVEGTLDLLELLIMHPFLKPDDQQKEVVN
                                     ::.::  :: :.... :   :.... ... 
CCDS49 KLVQTRAILNYIASKYNLYGKDIKERALIDMYIEGIADLGEMILLLPVCPPEEKDAKLAL
            70        80        90       100       110       120   

               40        50        60        70        80        90
pF1KE5 MAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQE
       . .:   ::::.:::.:..:::..::::.:: ::. :.. .  .::   ...:.::.:. 
CCDS49 IKEKIKNRYFPAFEKVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDSSLISSFPLLKA
           130       140       150       160       170       180   

              100       110       120         
pF1KE5 YTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIFRP
         ...::.::.:.::.::: .::: ::  .. . .::: 
CCDS49 LKTRISNLPTVKKFLQPGSPRKPPMDEKSLEEARKIFRF
           190       200       210       220  

>>CCDS4947.1 GSTA3 gene_id:2940|Hs108|chr6                (222 aa)
 initn: 395 init1: 395 opt: 395  Z-score: 537.8  bits: 105.9 E(32554): 1.2e-23
Smith-Waterman score: 395; 41.4% identity (77.3% similar) in 128 aa overlap (1-128:94-221)

                                             10        20        30
pF1KE5                               MYVEGTLDLLELLIMHPFLKPDDQQKEVVN
                                     ::.::  :: :.... :. .:.... ... 
CCDS49 KLVQTRAILNYIASKYNLYGKDIKERALIDMYTEGMADLNEMILLLPLCRPEEKDAKIAL
            70        80        90       100       110       120   

               40        50        60        70        80        90
pF1KE5 MAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQE
       . .:.  ::::.:::.:..:::..::::.:: ::. :.. .  .::   ...: ::.:. 
CCDS49 IKEKTKSRYFPAFEKVLQSHGQDYLVGNKLSRADISLVELLYYVEELDSSLISNFPLLKA
           130       140       150       160       170       180   

              100       110       120         
pF1KE5 YTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIFRP
         ...::.::.:.::.::: .::: :   .. . .::: 
CCDS49 LKTRISNLPTVKKFLQPGSPRKPPADAKALEEARKIFRF
           190       200       210       220  

>>CCDS4946.1 GSTA5 gene_id:221357|Hs108|chr6              (222 aa)
 initn: 377 init1: 377 opt: 377  Z-score: 513.5  bits: 101.4 E(32554): 2.8e-22
Smith-Waterman score: 377; 40.6% identity (78.1% similar) in 128 aa overlap (1-128:94-221)

                                             10        20        30
pF1KE5                               MYVEGTLDLLELLIMHPFLKPDDQQKEVVN
                                     ::.:: .:: :....  . .:.... ... 
CCDS49 KLVQTRAILNYIASKYNLYGKDMKERALIDMYTEGIVDLTEMILLLLICQPEERDAKTAL
            70        80        90       100       110       120   

               40        50        60        70        80        90
pF1KE5 MAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQE
       . .:   ::::.:::.:..: :..::::.:: ::. :.. .  .::   ...:.::.:. 
CCDS49 VKEKIKNRYFPAFEKVLKSHRQDYLVGNKLSWADIHLVELFYYVEELDSSLISSFPLLKA
           130       140       150       160       170       180   

              100       110       120         
pF1KE5 YTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIFRP
         ...::.::.:.::.:::..::: ::  .. . .::: 
CCDS49 LKTRISNLPTVKKFLQPGSQRKPPMDEKSLEEARKIFRF
           190       200       210       220  




129 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 22:24:56 2016 done: Mon Nov  7 22:24:56 2016
 Total Scan time:  1.760 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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