Result of FASTA (omim) for
pFN21AB6538
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6538, 391 aa
1>>>pF1KB6538 391 - 391 aa - 391 aa
Library: /omim/omim.rfq.tfa
64369986 residues in 92320 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.7700+/-0.000317; mu= 2.1164+/- 0.020
mean_var=184.4819+/-37.190, 0's: 0 Z-trim(122.3): 27 B-trim: 820 in 1/50
Lambda= 0.094427
statistics sampled from 41877 (41904) to 41877 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.773), E-opt: 0.2 (0.454), width: 16
Scan time: 4.770
The best scores are: opt bits E(92320)
NP_004575 (OMIM: 603761) cell cycle checkpoint con ( 391) 2618 368.4 1.7e-101
XP_006718715 (OMIM: 603761) cell cycle checkpoint ( 402) 2389 337.2 4.4e-92
NP_001230153 (OMIM: 603761) cell cycle checkpoint ( 315) 2113 299.6 7.5e-81
XP_016873586 (OMIM: 603761) cell cycle checkpoint ( 279) 1783 254.6 2.3e-67
XP_016873587 (OMIM: 603761) cell cycle checkpoint ( 199) 1354 196.1 6.8e-50
XP_024304628 (OMIM: 608368) cell cycle checkpoint ( 345) 533 84.4 5e-16
NP_001273461 (OMIM: 608368) cell cycle checkpoint ( 345) 533 84.4 5e-16
NP_001354980 (OMIM: 608368) cell cycle checkpoint ( 345) 533 84.4 5e-16
NP_001273460 (OMIM: 608368) cell cycle checkpoint ( 345) 533 84.4 5e-16
XP_024304629 (OMIM: 608368) cell cycle checkpoint ( 345) 533 84.4 5e-16
XP_011536274 (OMIM: 608368) cell cycle checkpoint ( 393) 533 84.4 5.6e-16
NP_001354982 (OMIM: 608368) cell cycle checkpoint ( 338) 503 80.3 8.4e-15
XP_016874366 (OMIM: 608368) cell cycle checkpoint ( 365) 495 79.2 1.9e-14
NP_001354981 (OMIM: 608368) cell cycle checkpoint ( 410) 464 75.0 3.9e-13
NP_001273464 (OMIM: 608368) cell cycle checkpoint ( 417) 464 75.0 4e-13
NP_689655 (OMIM: 608368) cell cycle checkpoint con ( 429) 464 75.0 4.1e-13
XP_016874371 (OMIM: 608368) cell cycle checkpoint ( 259) 313 54.3 4.2e-07
NP_001273462 (OMIM: 608368) cell cycle checkpoint ( 259) 313 54.3 4.2e-07
NP_001273463 (OMIM: 608368) cell cycle checkpoint ( 259) 313 54.3 4.2e-07
NP_001273465 (OMIM: 608368) cell cycle checkpoint ( 341) 278 49.6 1.4e-05
XP_005253906 (OMIM: 608368) cell cycle checkpoint ( 348) 278 49.6 1.5e-05
XP_016874369 (OMIM: 608368) cell cycle checkpoint ( 220) 265 47.7 3.4e-05
XP_016874368 (OMIM: 608368) cell cycle checkpoint ( 220) 265 47.7 3.4e-05
NP_001354983 (OMIM: 608368) cell cycle checkpoint ( 220) 265 47.7 3.4e-05
NP_001354984 (OMIM: 608368) cell cycle checkpoint ( 220) 265 47.7 3.4e-05
NP_001354985 (OMIM: 608368) cell cycle checkpoint ( 213) 235 43.6 0.00056
XP_016874370 (OMIM: 608368) cell cycle checkpoint ( 213) 235 43.6 0.00056
>>NP_004575 (OMIM: 603761) cell cycle checkpoint control (391 aa)
initn: 2618 init1: 2618 opt: 2618 Z-score: 1943.6 bits: 368.4 E(92320): 1.7e-101
Smith-Waterman score: 2618; 100.0% identity (100.0% similar) in 391 aa overlap (1-391:1-391)
10 20 30 40 50 60
pF1KB6 MKCLVTGGNVKVLGKAVHSLSRIGDELYLEPLEDGLSLRTVNSSRSAYACFLFAPLFFQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MKCLVTGGNVKVLGKAVHSLSRIGDELYLEPLEDGLSLRTVNSSRSAYACFLFAPLFFQQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 YQAATPGQDLLRCKILMKSFLSVFRSLAMLEKTVEKCCISLNGRSSRLVVQLHCKFGVRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 YQAATPGQDLLRCKILMKSFLSVFRSLAMLEKTVEKCCISLNGRSSRLVVQLHCKFGVRK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 THNLSFQDCESLQAVFDPASCPHMLRAPARVLGEAVLPFSPALAEVTLGIGRGRRVILRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 THNLSFQDCESLQAVFDPASCPHMLRAPARVLGEAVLPFSPALAEVTLGIGRGRRVILRS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 YHEEEADSTAKAMVTEMCLGEEDFQQLQAQEGVAITFCLKEFRGLLSFAESANLNLSIHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 YHEEEADSTAKAMVTEMCLGEEDFQQLQAQEGVAITFCLKEFRGLLSFAESANLNLSIHF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 DAPGRPAIFTIKDSLLDGHFVLATLSDTDSHSQDLGSPERHQPVPQLQAHSTPHPDDFAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 DAPGRPAIFTIKDSLLDGHFVLATLSDTDSHSQDLGSPERHQPVPQLQAHSTPHPDDFAN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 DDIDSYMIAMETTIGNEGSRVLPSISLSPGPQPPKSPGPHSEEEDEAEPSTVPGTPPPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 DDIDSYMIAMETTIGNEGSRVLPSISLSPGPQPPKSPGPHSEEEDEAEPSTVPGTPPPKK
310 320 330 340 350 360
370 380 390
pF1KB6 FRSLFFGSILAPVRSPQGPSPVLAEDSEGEG
:::::::::::::::::::::::::::::::
NP_004 FRSLFFGSILAPVRSPQGPSPVLAEDSEGEG
370 380 390
>>XP_006718715 (OMIM: 603761) cell cycle checkpoint cont (402 aa)
initn: 2389 init1: 2389 opt: 2389 Z-score: 1774.8 bits: 337.2 E(92320): 4.4e-92
Smith-Waterman score: 2389; 100.0% identity (100.0% similar) in 356 aa overlap (36-391:47-402)
10 20 30 40 50 60
pF1KB6 TGGNVKVLGKAVHSLSRIGDELYLEPLEDGLSLRTVNSSRSAYACFLFAPLFFQQYQAAT
::::::::::::::::::::::::::::::
XP_006 IGQVCEQKQPEGWVCGCPLTTSLSLLFVAQLSLRTVNSSRSAYACFLFAPLFFQQYQAAT
20 30 40 50 60 70
70 80 90 100 110 120
pF1KB6 PGQDLLRCKILMKSFLSVFRSLAMLEKTVEKCCISLNGRSSRLVVQLHCKFGVRKTHNLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PGQDLLRCKILMKSFLSVFRSLAMLEKTVEKCCISLNGRSSRLVVQLHCKFGVRKTHNLS
80 90 100 110 120 130
130 140 150 160 170 180
pF1KB6 FQDCESLQAVFDPASCPHMLRAPARVLGEAVLPFSPALAEVTLGIGRGRRVILRSYHEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FQDCESLQAVFDPASCPHMLRAPARVLGEAVLPFSPALAEVTLGIGRGRRVILRSYHEEE
140 150 160 170 180 190
190 200 210 220 230 240
pF1KB6 ADSTAKAMVTEMCLGEEDFQQLQAQEGVAITFCLKEFRGLLSFAESANLNLSIHFDAPGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ADSTAKAMVTEMCLGEEDFQQLQAQEGVAITFCLKEFRGLLSFAESANLNLSIHFDAPGR
200 210 220 230 240 250
250 260 270 280 290 300
pF1KB6 PAIFTIKDSLLDGHFVLATLSDTDSHSQDLGSPERHQPVPQLQAHSTPHPDDFANDDIDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PAIFTIKDSLLDGHFVLATLSDTDSHSQDLGSPERHQPVPQLQAHSTPHPDDFANDDIDS
260 270 280 290 300 310
310 320 330 340 350 360
pF1KB6 YMIAMETTIGNEGSRVLPSISLSPGPQPPKSPGPHSEEEDEAEPSTVPGTPPPKKFRSLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YMIAMETTIGNEGSRVLPSISLSPGPQPPKSPGPHSEEEDEAEPSTVPGTPPPKKFRSLF
320 330 340 350 360 370
370 380 390
pF1KB6 FGSILAPVRSPQGPSPVLAEDSEGEG
::::::::::::::::::::::::::
XP_006 FGSILAPVRSPQGPSPVLAEDSEGEG
380 390 400
>>NP_001230153 (OMIM: 603761) cell cycle checkpoint cont (315 aa)
initn: 2113 init1: 2113 opt: 2113 Z-score: 1573.1 bits: 299.6 E(92320): 7.5e-81
Smith-Waterman score: 2113; 99.7% identity (100.0% similar) in 315 aa overlap (77-391:1-315)
50 60 70 80 90 100
pF1KB6 AYACFLFAPLFFQQYQAATPGQDLLRCKILMKSFLSVFRSLAMLEKTVEKCCISLNGRSS
:.::::::::::::::::::::::::::::
NP_001 MQSFLSVFRSLAMLEKTVEKCCISLNGRSS
10 20 30
110 120 130 140 150 160
pF1KB6 RLVVQLHCKFGVRKTHNLSFQDCESLQAVFDPASCPHMLRAPARVLGEAVLPFSPALAEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLVVQLHCKFGVRKTHNLSFQDCESLQAVFDPASCPHMLRAPARVLGEAVLPFSPALAEV
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB6 TLGIGRGRRVILRSYHEEEADSTAKAMVTEMCLGEEDFQQLQAQEGVAITFCLKEFRGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLGIGRGRRVILRSYHEEEADSTAKAMVTEMCLGEEDFQQLQAQEGVAITFCLKEFRGLL
100 110 120 130 140 150
230 240 250 260 270 280
pF1KB6 SFAESANLNLSIHFDAPGRPAIFTIKDSLLDGHFVLATLSDTDSHSQDLGSPERHQPVPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SFAESANLNLSIHFDAPGRPAIFTIKDSLLDGHFVLATLSDTDSHSQDLGSPERHQPVPQ
160 170 180 190 200 210
290 300 310 320 330 340
pF1KB6 LQAHSTPHPDDFANDDIDSYMIAMETTIGNEGSRVLPSISLSPGPQPPKSPGPHSEEEDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQAHSTPHPDDFANDDIDSYMIAMETTIGNEGSRVLPSISLSPGPQPPKSPGPHSEEEDE
220 230 240 250 260 270
350 360 370 380 390
pF1KB6 AEPSTVPGTPPPKKFRSLFFGSILAPVRSPQGPSPVLAEDSEGEG
:::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEPSTVPGTPPPKKFRSLFFGSILAPVRSPQGPSPVLAEDSEGEG
280 290 300 310
>>XP_016873586 (OMIM: 603761) cell cycle checkpoint cont (279 aa)
initn: 1783 init1: 1783 opt: 1783 Z-score: 1331.0 bits: 254.6 E(92320): 2.3e-67
Smith-Waterman score: 1783; 100.0% identity (100.0% similar) in 264 aa overlap (128-391:16-279)
100 110 120 130 140 150
pF1KB6 CISLNGRSSRLVVQLHCKFGVRKTHNLSFQDCESLQAVFDPASCPHMLRAPARVLGEAVL
::::::::::::::::::::::::::::::
XP_016 MAGAAAWWSSCIASSDCESLQAVFDPASCPHMLRAPARVLGEAVL
10 20 30 40
160 170 180 190 200 210
pF1KB6 PFSPALAEVTLGIGRGRRVILRSYHEEEADSTAKAMVTEMCLGEEDFQQLQAQEGVAITF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFSPALAEVTLGIGRGRRVILRSYHEEEADSTAKAMVTEMCLGEEDFQQLQAQEGVAITF
50 60 70 80 90 100
220 230 240 250 260 270
pF1KB6 CLKEFRGLLSFAESANLNLSIHFDAPGRPAIFTIKDSLLDGHFVLATLSDTDSHSQDLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CLKEFRGLLSFAESANLNLSIHFDAPGRPAIFTIKDSLLDGHFVLATLSDTDSHSQDLGS
110 120 130 140 150 160
280 290 300 310 320 330
pF1KB6 PERHQPVPQLQAHSTPHPDDFANDDIDSYMIAMETTIGNEGSRVLPSISLSPGPQPPKSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PERHQPVPQLQAHSTPHPDDFANDDIDSYMIAMETTIGNEGSRVLPSISLSPGPQPPKSP
170 180 190 200 210 220
340 350 360 370 380 390
pF1KB6 GPHSEEEDEAEPSTVPGTPPPKKFRSLFFGSILAPVRSPQGPSPVLAEDSEGEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPHSEEEDEAEPSTVPGTPPPKKFRSLFFGSILAPVRSPQGPSPVLAEDSEGEG
230 240 250 260 270
>>XP_016873587 (OMIM: 603761) cell cycle checkpoint cont (199 aa)
initn: 1354 init1: 1354 opt: 1354 Z-score: 1017.3 bits: 196.1 E(92320): 6.8e-50
Smith-Waterman score: 1354; 100.0% identity (100.0% similar) in 199 aa overlap (193-391:1-199)
170 180 190 200 210 220
pF1KB6 LAEVTLGIGRGRRVILRSYHEEEADSTAKAMVTEMCLGEEDFQQLQAQEGVAITFCLKEF
::::::::::::::::::::::::::::::
XP_016 MVTEMCLGEEDFQQLQAQEGVAITFCLKEF
10 20 30
230 240 250 260 270 280
pF1KB6 RGLLSFAESANLNLSIHFDAPGRPAIFTIKDSLLDGHFVLATLSDTDSHSQDLGSPERHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RGLLSFAESANLNLSIHFDAPGRPAIFTIKDSLLDGHFVLATLSDTDSHSQDLGSPERHQ
40 50 60 70 80 90
290 300 310 320 330 340
pF1KB6 PVPQLQAHSTPHPDDFANDDIDSYMIAMETTIGNEGSRVLPSISLSPGPQPPKSPGPHSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVPQLQAHSTPHPDDFANDDIDSYMIAMETTIGNEGSRVLPSISLSPGPQPPKSPGPHSE
100 110 120 130 140 150
350 360 370 380 390
pF1KB6 EEDEAEPSTVPGTPPPKKFRSLFFGSILAPVRSPQGPSPVLAEDSEGEG
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEDEAEPSTVPGTPPPKKFRSLFFGSILAPVRSPQGPSPVLAEDSEGEG
160 170 180 190
>>XP_024304628 (OMIM: 608368) cell cycle checkpoint cont (345 aa)
initn: 321 init1: 275 opt: 533 Z-score: 409.3 bits: 84.4 E(92320): 5e-16
Smith-Waterman score: 533; 31.0% identity (61.3% similar) in 326 aa overlap (71-390:12-334)
50 60 70 80 90 100
pF1KB6 VNSSRSAYACFLFAPLFFQQYQAATPGQDLLRCKILMKSFLSVFRSLAMLEKTVEKCCIS
:.::. :::.: .:: : ::...::: :
XP_024 MSENELDTTLHLKCKLGMKSILPIFRCLNSLERNIEKCRIF
10 20 30 40
110 120 130 140 150 160
pF1KB6 LNGRSSRLVVQLHCKFGVRKTHNLSFQDCESLQAVFDPASCPHMLRAPARVLGEAVLPFS
. . ..:.:. . :...:::. ::. . ::..:: : . : :.:..:.. :.
XP_024 TRSDKCKVVIQFFYRHGIKRTHNICFQESQPLQVIFDKNVCTNTLMIQPRLLADAIVLFT
50 60 70 80 90 100
170 180 190 200 210 220
pF1KB6 PALAEVTLGIGRGRRVILRSYHEEEADSTAKAMVTEMCLGEEDFQQLQAQEGVAITFCLK
. ::::.. :.: .:: : ..:. .:: .: ..:. .: . ::::.:
XP_024 SSQEEVTLAV-TPLNFCLKSSNEESMD-LSNAVHSEMFVGSDEFDFFQIGMDTEITFCFK
110 120 130 140 150
230 240 250 260 270
pF1KB6 EFRGLLSFAESANLNLSIHFDAPGRPAIFTIKDSLLDGHFVLATLSDTDSHS---QDLGS
:..:.:.:.:... .::.:: ::.: ..: : :....:.::::.: .:.. :.:
XP_024 ELKGILTFSEATHAPISIYFDFPGKPLALSIDDMLVEANFILATLADEQSRASSPQSLCL
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB6 PERHQPVPQLQAHSTPHPDDFANDDIDSYMIAMETTIGNEGSRVLPSISLSPGPQPPKSP
.... .. .. . : . : : : . .: . .. .: .
XP_024 SQKRKRSDLIEKKAGKNVTGQALECI-SKKAAPRRLYPKETLTNISALENCGSPAMKRVD
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB6 GPHSEEEDEAEPST--VPGTPPPKKFRSLFFGSILAPVRSP-QGPSPVLAEDSEGEG
: :: . . .: :::. .:: .:::.. . . . : ::. :..:
XP_024 GDVSEVSESSVSNTEEVPGSLCLRKFSCMFFGAVSSDQQEHFNHPFDSLARASDSEEDMN
280 290 300 310 320 330
XP_024 NGSFSIF
340
>>NP_001273461 (OMIM: 608368) cell cycle checkpoint cont (345 aa)
initn: 321 init1: 275 opt: 533 Z-score: 409.3 bits: 84.4 E(92320): 5e-16
Smith-Waterman score: 533; 31.0% identity (61.3% similar) in 326 aa overlap (71-390:12-334)
50 60 70 80 90 100
pF1KB6 VNSSRSAYACFLFAPLFFQQYQAATPGQDLLRCKILMKSFLSVFRSLAMLEKTVEKCCIS
:.::. :::.: .:: : ::...::: :
NP_001 MSENELDTTLHLKCKLGMKSILPIFRCLNSLERNIEKCRIF
10 20 30 40
110 120 130 140 150 160
pF1KB6 LNGRSSRLVVQLHCKFGVRKTHNLSFQDCESLQAVFDPASCPHMLRAPARVLGEAVLPFS
. . ..:.:. . :...:::. ::. . ::..:: : . : :.:..:.. :.
NP_001 TRSDKCKVVIQFFYRHGIKRTHNICFQESQPLQVIFDKNVCTNTLMIQPRLLADAIVLFT
50 60 70 80 90 100
170 180 190 200 210 220
pF1KB6 PALAEVTLGIGRGRRVILRSYHEEEADSTAKAMVTEMCLGEEDFQQLQAQEGVAITFCLK
. ::::.. :.: .:: : ..:. .:: .: ..:. .: . ::::.:
NP_001 SSQEEVTLAV-TPLNFCLKSSNEESMD-LSNAVHSEMFVGSDEFDFFQIGMDTEITFCFK
110 120 130 140 150
230 240 250 260 270
pF1KB6 EFRGLLSFAESANLNLSIHFDAPGRPAIFTIKDSLLDGHFVLATLSDTDSHS---QDLGS
:..:.:.:.:... .::.:: ::.: ..: : :....:.::::.: .:.. :.:
NP_001 ELKGILTFSEATHAPISIYFDFPGKPLALSIDDMLVEANFILATLADEQSRASSPQSLCL
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB6 PERHQPVPQLQAHSTPHPDDFANDDIDSYMIAMETTIGNEGSRVLPSISLSPGPQPPKSP
.... .. .. . : . : : : . .: . .. .: .
NP_001 SQKRKRSDLIEKKAGKNVTGQALECI-SKKAAPRRLYPKETLTNISALENCGSPAMKRVD
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB6 GPHSEEEDEAEPST--VPGTPPPKKFRSLFFGSILAPVRSP-QGPSPVLAEDSEGEG
: :: . . .: :::. .:: .:::.. . . . : ::. :..:
NP_001 GDVSEVSESSVSNTEEVPGSLCLRKFSCMFFGAVSSDQQEHFNHPFDSLARASDSEEDMN
280 290 300 310 320 330
NP_001 NGSFSIF
340
>>NP_001354980 (OMIM: 608368) cell cycle checkpoint cont (345 aa)
initn: 321 init1: 275 opt: 533 Z-score: 409.3 bits: 84.4 E(92320): 5e-16
Smith-Waterman score: 533; 31.0% identity (61.3% similar) in 326 aa overlap (71-390:12-334)
50 60 70 80 90 100
pF1KB6 VNSSRSAYACFLFAPLFFQQYQAATPGQDLLRCKILMKSFLSVFRSLAMLEKTVEKCCIS
:.::. :::.: .:: : ::...::: :
NP_001 MSENELDTTLHLKCKLGMKSILPIFRCLNSLERNIEKCRIF
10 20 30 40
110 120 130 140 150 160
pF1KB6 LNGRSSRLVVQLHCKFGVRKTHNLSFQDCESLQAVFDPASCPHMLRAPARVLGEAVLPFS
. . ..:.:. . :...:::. ::. . ::..:: : . : :.:..:.. :.
NP_001 TRSDKCKVVIQFFYRHGIKRTHNICFQESQPLQVIFDKNVCTNTLMIQPRLLADAIVLFT
50 60 70 80 90 100
170 180 190 200 210 220
pF1KB6 PALAEVTLGIGRGRRVILRSYHEEEADSTAKAMVTEMCLGEEDFQQLQAQEGVAITFCLK
. ::::.. :.: .:: : ..:. .:: .: ..:. .: . ::::.:
NP_001 SSQEEVTLAV-TPLNFCLKSSNEESMD-LSNAVHSEMFVGSDEFDFFQIGMDTEITFCFK
110 120 130 140 150
230 240 250 260 270
pF1KB6 EFRGLLSFAESANLNLSIHFDAPGRPAIFTIKDSLLDGHFVLATLSDTDSHS---QDLGS
:..:.:.:.:... .::.:: ::.: ..: : :....:.::::.: .:.. :.:
NP_001 ELKGILTFSEATHAPISIYFDFPGKPLALSIDDMLVEANFILATLADEQSRASSPQSLCL
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB6 PERHQPVPQLQAHSTPHPDDFANDDIDSYMIAMETTIGNEGSRVLPSISLSPGPQPPKSP
.... .. .. . : . : : : . .: . .. .: .
NP_001 SQKRKRSDLIEKKAGKNVTGQALECI-SKKAAPRRLYPKETLTNISALENCGSPAMKRVD
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB6 GPHSEEEDEAEPST--VPGTPPPKKFRSLFFGSILAPVRSP-QGPSPVLAEDSEGEG
: :: . . .: :::. .:: .:::.. . . . : ::. :..:
NP_001 GDVSEVSESSVSNTEEVPGSLCLRKFSCMFFGAVSSDQQEHFNHPFDSLARASDSEEDMN
280 290 300 310 320 330
NP_001 NGSFSIF
340
>>NP_001273460 (OMIM: 608368) cell cycle checkpoint cont (345 aa)
initn: 321 init1: 275 opt: 533 Z-score: 409.3 bits: 84.4 E(92320): 5e-16
Smith-Waterman score: 533; 31.0% identity (61.3% similar) in 326 aa overlap (71-390:12-334)
50 60 70 80 90 100
pF1KB6 VNSSRSAYACFLFAPLFFQQYQAATPGQDLLRCKILMKSFLSVFRSLAMLEKTVEKCCIS
:.::. :::.: .:: : ::...::: :
NP_001 MSENELDTTLHLKCKLGMKSILPIFRCLNSLERNIEKCRIF
10 20 30 40
110 120 130 140 150 160
pF1KB6 LNGRSSRLVVQLHCKFGVRKTHNLSFQDCESLQAVFDPASCPHMLRAPARVLGEAVLPFS
. . ..:.:. . :...:::. ::. . ::..:: : . : :.:..:.. :.
NP_001 TRSDKCKVVIQFFYRHGIKRTHNICFQESQPLQVIFDKNVCTNTLMIQPRLLADAIVLFT
50 60 70 80 90 100
170 180 190 200 210 220
pF1KB6 PALAEVTLGIGRGRRVILRSYHEEEADSTAKAMVTEMCLGEEDFQQLQAQEGVAITFCLK
. ::::.. :.: .:: : ..:. .:: .: ..:. .: . ::::.:
NP_001 SSQEEVTLAV-TPLNFCLKSSNEESMD-LSNAVHSEMFVGSDEFDFFQIGMDTEITFCFK
110 120 130 140 150
230 240 250 260 270
pF1KB6 EFRGLLSFAESANLNLSIHFDAPGRPAIFTIKDSLLDGHFVLATLSDTDSHS---QDLGS
:..:.:.:.:... .::.:: ::.: ..: : :....:.::::.: .:.. :.:
NP_001 ELKGILTFSEATHAPISIYFDFPGKPLALSIDDMLVEANFILATLADEQSRASSPQSLCL
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB6 PERHQPVPQLQAHSTPHPDDFANDDIDSYMIAMETTIGNEGSRVLPSISLSPGPQPPKSP
.... .. .. . : . : : : . .: . .. .: .
NP_001 SQKRKRSDLIEKKAGKNVTGQALECI-SKKAAPRRLYPKETLTNISALENCGSPAMKRVD
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB6 GPHSEEEDEAEPST--VPGTPPPKKFRSLFFGSILAPVRSP-QGPSPVLAEDSEGEG
: :: . . .: :::. .:: .:::.. . . . : ::. :..:
NP_001 GDVSEVSESSVSNTEEVPGSLCLRKFSCMFFGAVSSDQQEHFNHPFDSLARASDSEEDMN
280 290 300 310 320 330
NP_001 NGSFSIF
340
>>XP_024304629 (OMIM: 608368) cell cycle checkpoint cont (345 aa)
initn: 321 init1: 275 opt: 533 Z-score: 409.3 bits: 84.4 E(92320): 5e-16
Smith-Waterman score: 533; 31.0% identity (61.3% similar) in 326 aa overlap (71-390:12-334)
50 60 70 80 90 100
pF1KB6 VNSSRSAYACFLFAPLFFQQYQAATPGQDLLRCKILMKSFLSVFRSLAMLEKTVEKCCIS
:.::. :::.: .:: : ::...::: :
XP_024 MSENELDTTLHLKCKLGMKSILPIFRCLNSLERNIEKCRIF
10 20 30 40
110 120 130 140 150 160
pF1KB6 LNGRSSRLVVQLHCKFGVRKTHNLSFQDCESLQAVFDPASCPHMLRAPARVLGEAVLPFS
. . ..:.:. . :...:::. ::. . ::..:: : . : :.:..:.. :.
XP_024 TRSDKCKVVIQFFYRHGIKRTHNICFQESQPLQVIFDKNVCTNTLMIQPRLLADAIVLFT
50 60 70 80 90 100
170 180 190 200 210 220
pF1KB6 PALAEVTLGIGRGRRVILRSYHEEEADSTAKAMVTEMCLGEEDFQQLQAQEGVAITFCLK
. ::::.. :.: .:: : ..:. .:: .: ..:. .: . ::::.:
XP_024 SSQEEVTLAV-TPLNFCLKSSNEESMD-LSNAVHSEMFVGSDEFDFFQIGMDTEITFCFK
110 120 130 140 150
230 240 250 260 270
pF1KB6 EFRGLLSFAESANLNLSIHFDAPGRPAIFTIKDSLLDGHFVLATLSDTDSHS---QDLGS
:..:.:.:.:... .::.:: ::.: ..: : :....:.::::.: .:.. :.:
XP_024 ELKGILTFSEATHAPISIYFDFPGKPLALSIDDMLVEANFILATLADEQSRASSPQSLCL
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB6 PERHQPVPQLQAHSTPHPDDFANDDIDSYMIAMETTIGNEGSRVLPSISLSPGPQPPKSP
.... .. .. . : . : : : . .: . .. .: .
XP_024 SQKRKRSDLIEKKAGKNVTGQALECI-SKKAAPRRLYPKETLTNISALENCGSPAMKRVD
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB6 GPHSEEEDEAEPST--VPGTPPPKKFRSLFFGSILAPVRSP-QGPSPVLAEDSEGEG
: :: . . .: :::. .:: .:::.. . . . : ::. :..:
XP_024 GDVSEVSESSVSNTEEVPGSLCLRKFSCMFFGAVSSDQQEHFNHPFDSLARASDSEEDMN
280 290 300 310 320 330
XP_024 NGSFSIF
340
391 residues in 1 query sequences
64369986 residues in 92320 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Oct 24 21:33:43 2019 done: Thu Oct 24 21:33:44 2019
Total Scan time: 4.770 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]