FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4354, 371 aa 1>>>pF1KE4354 371 - 371 aa - 371 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3468+/-0.000752; mu= 17.1976+/- 0.045 mean_var=76.3188+/-15.232, 0's: 0 Z-trim(109.2): 20 B-trim: 0 in 0/52 Lambda= 0.146811 statistics sampled from 10741 (10755) to 10741 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.701), E-opt: 0.2 (0.33), width: 16 Scan time: 2.590 The best scores are: opt bits E(32554) CCDS75945.1 CRLF2 gene_id:64109|Hs108|chrY ( 371) 2553 549.9 1.3e-156 CCDS75945.1 CRLF2 gene_id:64109|Hs108|chrX ( 371) 2553 549.9 1.3e-156 CCDS75944.1 CRLF2 gene_id:64109|Hs108|chrY ( 259) 1782 386.5 1.4e-107 CCDS75944.1 CRLF2 gene_id:64109|Hs108|chrX ( 259) 1782 386.5 1.4e-107 >>CCDS75945.1 CRLF2 gene_id:64109|Hs108|chrY (371 aa) initn: 2553 init1: 2553 opt: 2553 Z-score: 2925.1 bits: 549.9 E(32554): 1.3e-156 Smith-Waterman score: 2553; 100.0% identity (100.0% similar) in 371 aa overlap (1-371:1-371) 10 20 30 40 50 60 pF1KE4 MGRLVLLWGAAVFLLGGWMALGQGGAAEGVQIQIIYFNLETVQVTWNASKYSRTNLTFHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 MGRLVLLWGAAVFLLGGWMALGQGGAAEGVQIQIIYFNLETVQVTWNASKYSRTNLTFHY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 RFNGDEAYDQCTNYLLQEGHTSGCLLDAEQRDDILYFSIRNGTHPVFTASRWMVYYLKPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 RFNGDEAYDQCTNYLLQEGHTSGCLLDAEQRDDILYFSIRNGTHPVFTASRWMVYYLKPS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 SPKHVRFSWHQDAVTVTCSDLSYGDLLYEVQYRSPFDTEWQSKQENTCNVTIEGLDAEKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SPKHVRFSWHQDAVTVTCSDLSYGDLLYEVQYRSPFDTEWQSKQENTCNVTIEGLDAEKC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 YSFWVRVKAMEDVYGPDTYPSDWSEVTCWQRGEIRDACAETPTPPKPKLSKFILISSLAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 YSFWVRVKAMEDVYGPDTYPSDWSEVTCWQRGEIRDACAETPTPPKPKLSKFILISSLAI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 LLMVSLLLLSLWKLWRVKKFLIPSVPDPKSIFPGLFEIHQGNFQEWITDTQNVAHLHKMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 LLMVSLLLLSLWKLWRVKKFLIPSVPDPKSIFPGLFEIHQGNFQEWITDTQNVAHLHKMA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 GAEQESGPEEPLVVQLAKTEAESPRMLDPQTEEKEASGGSLQLPHQPLQGGDVVTIGGFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 GAEQESGPEEPLVVQLAKTEAESPRMLDPQTEEKEASGGSLQLPHQPLQGGDVVTIGGFT 310 320 330 340 350 360 370 pF1KE4 FVMNDRSYVAL ::::::::::: CCDS75 FVMNDRSYVAL 370 >>CCDS75945.1 CRLF2 gene_id:64109|Hs108|chrX (371 aa) initn: 2553 init1: 2553 opt: 2553 Z-score: 2925.1 bits: 549.9 E(32554): 1.3e-156 Smith-Waterman score: 2553; 100.0% identity (100.0% similar) in 371 aa overlap (1-371:1-371) 10 20 30 40 50 60 pF1KE4 MGRLVLLWGAAVFLLGGWMALGQGGAAEGVQIQIIYFNLETVQVTWNASKYSRTNLTFHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 MGRLVLLWGAAVFLLGGWMALGQGGAAEGVQIQIIYFNLETVQVTWNASKYSRTNLTFHY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 RFNGDEAYDQCTNYLLQEGHTSGCLLDAEQRDDILYFSIRNGTHPVFTASRWMVYYLKPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 RFNGDEAYDQCTNYLLQEGHTSGCLLDAEQRDDILYFSIRNGTHPVFTASRWMVYYLKPS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 SPKHVRFSWHQDAVTVTCSDLSYGDLLYEVQYRSPFDTEWQSKQENTCNVTIEGLDAEKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SPKHVRFSWHQDAVTVTCSDLSYGDLLYEVQYRSPFDTEWQSKQENTCNVTIEGLDAEKC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 YSFWVRVKAMEDVYGPDTYPSDWSEVTCWQRGEIRDACAETPTPPKPKLSKFILISSLAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 YSFWVRVKAMEDVYGPDTYPSDWSEVTCWQRGEIRDACAETPTPPKPKLSKFILISSLAI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 LLMVSLLLLSLWKLWRVKKFLIPSVPDPKSIFPGLFEIHQGNFQEWITDTQNVAHLHKMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 LLMVSLLLLSLWKLWRVKKFLIPSVPDPKSIFPGLFEIHQGNFQEWITDTQNVAHLHKMA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 GAEQESGPEEPLVVQLAKTEAESPRMLDPQTEEKEASGGSLQLPHQPLQGGDVVTIGGFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 GAEQESGPEEPLVVQLAKTEAESPRMLDPQTEEKEASGGSLQLPHQPLQGGDVVTIGGFT 310 320 330 340 350 360 370 pF1KE4 FVMNDRSYVAL ::::::::::: CCDS75 FVMNDRSYVAL 370 >>CCDS75944.1 CRLF2 gene_id:64109|Hs108|chrY (259 aa) initn: 1782 init1: 1782 opt: 1782 Z-score: 2044.8 bits: 386.5 E(32554): 1.4e-107 Smith-Waterman score: 1782; 100.0% identity (100.0% similar) in 259 aa overlap (113-371:1-259) 90 100 110 120 130 140 pF1KE4 GCLLDAEQRDDILYFSIRNGTHPVFTASRWMVYYLKPSSPKHVRFSWHQDAVTVTCSDLS :::::::::::::::::::::::::::::: CCDS75 MVYYLKPSSPKHVRFSWHQDAVTVTCSDLS 10 20 30 150 160 170 180 190 200 pF1KE4 YGDLLYEVQYRSPFDTEWQSKQENTCNVTIEGLDAEKCYSFWVRVKAMEDVYGPDTYPSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 YGDLLYEVQYRSPFDTEWQSKQENTCNVTIEGLDAEKCYSFWVRVKAMEDVYGPDTYPSD 40 50 60 70 80 90 210 220 230 240 250 260 pF1KE4 WSEVTCWQRGEIRDACAETPTPPKPKLSKFILISSLAILLMVSLLLLSLWKLWRVKKFLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 WSEVTCWQRGEIRDACAETPTPPKPKLSKFILISSLAILLMVSLLLLSLWKLWRVKKFLI 100 110 120 130 140 150 270 280 290 300 310 320 pF1KE4 PSVPDPKSIFPGLFEIHQGNFQEWITDTQNVAHLHKMAGAEQESGPEEPLVVQLAKTEAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 PSVPDPKSIFPGLFEIHQGNFQEWITDTQNVAHLHKMAGAEQESGPEEPLVVQLAKTEAE 160 170 180 190 200 210 330 340 350 360 370 pF1KE4 SPRMLDPQTEEKEASGGSLQLPHQPLQGGDVVTIGGFTFVMNDRSYVAL ::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SPRMLDPQTEEKEASGGSLQLPHQPLQGGDVVTIGGFTFVMNDRSYVAL 220 230 240 250 >>CCDS75944.1 CRLF2 gene_id:64109|Hs108|chrX (259 aa) initn: 1782 init1: 1782 opt: 1782 Z-score: 2044.8 bits: 386.5 E(32554): 1.4e-107 Smith-Waterman score: 1782; 100.0% identity (100.0% similar) in 259 aa overlap (113-371:1-259) 90 100 110 120 130 140 pF1KE4 GCLLDAEQRDDILYFSIRNGTHPVFTASRWMVYYLKPSSPKHVRFSWHQDAVTVTCSDLS :::::::::::::::::::::::::::::: CCDS75 MVYYLKPSSPKHVRFSWHQDAVTVTCSDLS 10 20 30 150 160 170 180 190 200 pF1KE4 YGDLLYEVQYRSPFDTEWQSKQENTCNVTIEGLDAEKCYSFWVRVKAMEDVYGPDTYPSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 YGDLLYEVQYRSPFDTEWQSKQENTCNVTIEGLDAEKCYSFWVRVKAMEDVYGPDTYPSD 40 50 60 70 80 90 210 220 230 240 250 260 pF1KE4 WSEVTCWQRGEIRDACAETPTPPKPKLSKFILISSLAILLMVSLLLLSLWKLWRVKKFLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 WSEVTCWQRGEIRDACAETPTPPKPKLSKFILISSLAILLMVSLLLLSLWKLWRVKKFLI 100 110 120 130 140 150 270 280 290 300 310 320 pF1KE4 PSVPDPKSIFPGLFEIHQGNFQEWITDTQNVAHLHKMAGAEQESGPEEPLVVQLAKTEAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 PSVPDPKSIFPGLFEIHQGNFQEWITDTQNVAHLHKMAGAEQESGPEEPLVVQLAKTEAE 160 170 180 190 200 210 330 340 350 360 370 pF1KE4 SPRMLDPQTEEKEASGGSLQLPHQPLQGGDVVTIGGFTFVMNDRSYVAL ::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SPRMLDPQTEEKEASGGSLQLPHQPLQGGDVVTIGGFTFVMNDRSYVAL 220 230 240 250 371 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 17:06:32 2016 done: Mon Nov 7 17:06:33 2016 Total Scan time: 2.590 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]