FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9256, 718 aa 1>>>pF1KE9256 718 - 718 aa - 718 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 14.3552+/-0.00164; mu= -22.3273+/- 0.096 mean_var=529.0015+/-114.669, 0's: 0 Z-trim(108.4): 158 B-trim: 0 in 0/52 Lambda= 0.055763 statistics sampled from 10052 (10169) to 10052 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.632), E-opt: 0.2 (0.312), width: 16 Scan time: 2.700 The best scores are: opt bits E(32554) CCDS43539.1 MAD1L1 gene_id:8379|Hs108|chr7 ( 718) 4488 376.7 6.5e-104 CCDS78201.1 MAD1L1 gene_id:8379|Hs108|chr7 ( 626) 3506 297.7 3.5e-80 >>CCDS43539.1 MAD1L1 gene_id:8379|Hs108|chr7 (718 aa) initn: 4488 init1: 4488 opt: 4488 Z-score: 1979.0 bits: 376.7 E(32554): 6.5e-104 Smith-Waterman score: 4488; 99.9% identity (100.0% similar) in 718 aa overlap (1-718:1-718) 10 20 30 40 50 60 pF1KE9 MEDLGENTMVLSTLRSLNNFISQRVEGGSGLDISTSAPGSLQMQYQQSMQLEERAEQIRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MEDLGENTMVLSTLRSLNNFISQRVEGGSGLDISTSAPGSLQMQYQQSMQLEERAEQIRS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 KSHLIQVEREKMQMELSHKRARVELERAASTSARNYEREVDRNQELLTRIRQLQEREAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KSHLIQVEREKMQMELSHKRARVELERAASTSARNYEREVDRNQELLTRIRQLQEREAGA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 EEKMQEQLERNRQCQQNLDAASKRLREKEDSLAQAGETINALKGRISELQWSVMDQEMRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 EEKMQEQLERNRQCQQNLDAASKRLREKEDSLAQAGETINALKGRISELQWSVMDQEMRV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 KRLESEKQELQEQLDLQHKKCQEANQKIQELQASQEARADHEQQIKDLEQKLSLQEQDAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KRLESEKQELQEQLDLQHKKCQEANQKIQELQASQEARADHEQQIKDLEQKLSLQEQDAA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 IVKNMKSELVRLPRLERELKQLREESAHLREMRETNGLLQEELEGLQRKLGRQEKMQETL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 IVKNMKSELVRLPRLERELKQLREESAHLREMRETNGLLQEELEGLQRKLGRQEKMQETL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE9 VGLELENERLLAKLQSWERLDQTMGLSIRTPEDLSRFVVELQQRELALKDKNSAVTSSAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 VGLELENERLLAKLQSWERLDQTMGLSIRTPEDLSRFVVELQQRELALKDKNSAVTSSAR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE9 GLEKARQQLQEELRQVSGQLLEERKKRETHEALARRLQKRVLLLTKERDGMRAILGSYDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 GLEKARQQLQEELRQVSGQLLEERKKRETHEALARRLQKRVLLLTKERDGMRAILGSYDS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE9 ELTPAEYSPQLTRRMREAEDMVQKVHSHSAEMEAQLSQALEELGGQKQRADMLEMELKML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 ELTPAEYSPQLTRRMREAEDMVQKVHSHSAEMEAQLSQALEELGGQKQRADMLEMELKML 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE9 KSQSSSAEQSFLFSREEADTLRLKVEELEGERSRLEEEKRMLEAQLERRALQGDYDQSRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KSQSSSAEQSFLFSREEADTLRLKVEELEGERSRLEEEKRMLEAQLERRALQGDYDQSRT 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE9 KVLHMSLNPTSVARQRLHEDHSQLQAECERLRGLLRAMERGGTVPADLEAAAASLPSSKE :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: CCDS43 KVLHMSLNPTSVARQRLREDHSQLQAECERLRGLLRAMERGGTVPADLEAAAASLPSSKE 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE9 VAELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTSLYAEHPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 VAELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTSLYAEHPG 610 620 630 640 650 660 670 680 690 700 710 pF1KE9 DCLIFKATSPSGSKMQLLETEFSHTVGELIEVHLRRQDSIPAFLSSLTLELFSRQTVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 DCLIFKATSPSGSKMQLLETEFSHTVGELIEVHLRRQDSIPAFLSSLTLELFSRQTVA 670 680 690 700 710 >>CCDS78201.1 MAD1L1 gene_id:8379|Hs108|chr7 (626 aa) initn: 3506 init1: 3506 opt: 3506 Z-score: 1552.9 bits: 297.7 E(32554): 3.5e-80 Smith-Waterman score: 3506; 99.8% identity (100.0% similar) in 561 aa overlap (158-718:66-626) 130 140 150 160 170 180 pF1KE9 LERNRQCQQNLDAASKRLREKEDSLAQAGETINALKGRISELQWSVMDQEMRVKRLESEK :::::::::::::::::::::::::::::: CCDS78 PCQLSGVPYNTGDPVGRWARPCIWPCPWHTTINALKGRISELQWSVMDQEMRVKRLESEK 40 50 60 70 80 90 190 200 210 220 230 240 pF1KE9 QELQEQLDLQHKKCQEANQKIQELQASQEARADHEQQIKDLEQKLSLQEQDAAIVKNMKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 QELQEQLDLQHKKCQEANQKIQELQASQEARADHEQQIKDLEQKLSLQEQDAAIVKNMKS 100 110 120 130 140 150 250 260 270 280 290 300 pF1KE9 ELVRLPRLERELKQLREESAHLREMRETNGLLQEELEGLQRKLGRQEKMQETLVGLELEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 ELVRLPRLERELKQLREESAHLREMRETNGLLQEELEGLQRKLGRQEKMQETLVGLELEN 160 170 180 190 200 210 310 320 330 340 350 360 pF1KE9 ERLLAKLQSWERLDQTMGLSIRTPEDLSRFVVELQQRELALKDKNSAVTSSARGLEKARQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 ERLLAKLQSWERLDQTMGLSIRTPEDLSRFVVELQQRELALKDKNSAVTSSARGLEKARQ 220 230 240 250 260 270 370 380 390 400 410 420 pF1KE9 QLQEELRQVSGQLLEERKKRETHEALARRLQKRVLLLTKERDGMRAILGSYDSELTPAEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 QLQEELRQVSGQLLEERKKRETHEALARRLQKRVLLLTKERDGMRAILGSYDSELTPAEY 280 290 300 310 320 330 430 440 450 460 470 480 pF1KE9 SPQLTRRMREAEDMVQKVHSHSAEMEAQLSQALEELGGQKQRADMLEMELKMLKSQSSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 SPQLTRRMREAEDMVQKVHSHSAEMEAQLSQALEELGGQKQRADMLEMELKMLKSQSSSA 340 350 360 370 380 390 490 500 510 520 530 540 pF1KE9 EQSFLFSREEADTLRLKVEELEGERSRLEEEKRMLEAQLERRALQGDYDQSRTKVLHMSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 EQSFLFSREEADTLRLKVEELEGERSRLEEEKRMLEAQLERRALQGDYDQSRTKVLHMSL 400 410 420 430 440 450 550 560 570 580 590 600 pF1KE9 NPTSVARQRLHEDHSQLQAECERLRGLLRAMERGGTVPADLEAAAASLPSSKEVAELKKQ ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 NPTSVARQRLREDHSQLQAECERLRGLLRAMERGGTVPADLEAAAASLPSSKEVAELKKQ 460 470 480 490 500 510 610 620 630 640 650 660 pF1KE9 VESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTSLYAEHPGDCLIFKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 VESAELKNQRLKEVFQTKIQEFRKACYTLTGYQIDITTENQYRLTSLYAEHPGDCLIFKA 520 530 540 550 560 570 670 680 690 700 710 pF1KE9 TSPSGSKMQLLETEFSHTVGELIEVHLRRQDSIPAFLSSLTLELFSRQTVA ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 TSPSGSKMQLLETEFSHTVGELIEVHLRRQDSIPAFLSSLTLELFSRQTVA 580 590 600 610 620 718 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 17:00:51 2016 done: Mon Nov 7 17:00:52 2016 Total Scan time: 2.700 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]