FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2192, 574 aa 1>>>pF1KE2192 574 - 574 aa - 574 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.6389+/-0.000386; mu= 11.7095+/- 0.024 mean_var=91.7578+/-18.250, 0's: 0 Z-trim(113.6): 109 B-trim: 253 in 1/53 Lambda= 0.133891 statistics sampled from 22979 (23090) to 22979 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.643), E-opt: 0.2 (0.271), width: 16 Scan time: 10.420 The best scores are: opt bits E(85289) NP_001263199 (OMIM: 603574) methyl-CpG-binding dom ( 574) 3845 753.4 4.6e-217 NP_003916 (OMIM: 603574) methyl-CpG-binding domain ( 580) 3823 749.1 8.9e-216 NP_001263200 (OMIM: 603574) methyl-CpG-binding dom ( 572) 3639 713.6 4.4e-205 NP_001263201 (OMIM: 603574) methyl-CpG-binding dom ( 540) 3505 687.7 2.6e-197 NP_001263202 (OMIM: 603574) methyl-CpG-binding dom ( 262) 1267 255.3 1.9e-67 XP_011511570 (OMIM: 603574) PREDICTED: methyl-CpG- ( 185) 1253 252.5 8.9e-67 XP_011529468 (OMIM: 300005,300055,300260,300496,30 ( 393) 258 60.4 1.3e-08 NP_001303266 (OMIM: 300005,300055,300260,300496,30 ( 393) 258 60.4 1.3e-08 XP_016885022 (OMIM: 300005,300055,300260,300496,30 ( 393) 258 60.4 1.3e-08 XP_005274739 (OMIM: 300005,300055,300260,300496,30 ( 393) 258 60.4 1.3e-08 NP_004983 (OMIM: 300005,300055,300260,300496,30067 ( 486) 258 60.4 1.5e-08 NP_001104262 (OMIM: 300005,300055,300260,300496,30 ( 498) 258 60.5 1.5e-08 NP_001268382 (OMIM: 603573) methyl-CpG-binding dom ( 291) 165 42.4 0.0025 >>NP_001263199 (OMIM: 603574) methyl-CpG-binding domain (574 aa) initn: 3845 init1: 3845 opt: 3845 Z-score: 4017.9 bits: 753.4 E(85289): 4.6e-217 Smith-Waterman score: 3845; 100.0% identity (100.0% similar) in 574 aa overlap (1-574:1-574) 10 20 30 40 50 60 pF1KE2 MGTTGLESLSLGDRGAAPTVTSSERLVPDPPNDLRKEDVAMELERVGEDEEQMMIKRSSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGTTGLESLSLGDRGAAPTVTSSERLVPDPPNDLRKEDVAMELERVGEDEEQMMIKRSSE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 CNPLLQEPIASAQFGATAGTECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 CNPLLQEPIASAQFGATAGTECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 KSSLANYLHKNGETSLKPEDFDFTVLSKRGIKSRYKDCSMAALTSHLQNQSNNSNWNLRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KSSLANYLHKNGETSLKPEDFDFTVLSKRGIKSRYKDCSMAALTSHLQNQSNNSNWNLRT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 RSKCKKDVFMPPSSSSELQESRGLSNFTSTHLLLKEDEGVDDVNFRKVRKPKGKVTILKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RSKCKKDVFMPPSSSSELQESRGLSNFTSTHLLLKEDEGVDDVNFRKVRKPKGKVTILKG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 IPIKKTKKGCRKSCSGFVQSDSKRESVCNKADAESEPVAQKSQLDRTVCISDAGACGETL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IPIKKTKKGCRKSCSGFVQSDSKRESVCNKADAESEPVAQKSQLDRTVCISDAGACGETL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 SVTSEENSLVKKKERSLSSGSNFCSEQKTSGIINKFCSAKDSEHNEKYEDTFLESEEIGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SVTSEENSLVKKKERSLSSGSNFCSEQKTSGIINKFCSAKDSEHNEKYEDTFLESEEIGT 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 KVEVVERKEHLHTDILKRGSEMDNNCSPTRKDFTEDTIPRTQIERRKTSLYFSSKYNKEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KVEVVERKEHLHTDILKRGSEMDNNCSPTRKDFTEDTIPRTQIERRKTSLYFSSKYNKEA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 LSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWKFLEKYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWKFLEKYP 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 SAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEYLTKQWKYPIELHGIGKYGNDSYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEYLTKQWKYPIELHGIGKYGNDSYR 490 500 510 520 530 540 550 560 570 pF1KE2 IFCVNEWKQVHPEDHKLNKYHDWLWENHEKLSLS :::::::::::::::::::::::::::::::::: NP_001 IFCVNEWKQVHPEDHKLNKYHDWLWENHEKLSLS 550 560 570 >>NP_003916 (OMIM: 603574) methyl-CpG-binding domain pro (580 aa) initn: 2598 init1: 2598 opt: 3823 Z-score: 3994.9 bits: 749.1 E(85289): 8.9e-216 Smith-Waterman score: 3823; 99.0% identity (99.0% similar) in 580 aa overlap (1-574:1-580) 10 20 30 40 50 60 pF1KE2 MGTTGLESLSLGDRGAAPTVTSSERLVPDPPNDLRKEDVAMELERVGEDEEQMMIKRSSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 MGTTGLESLSLGDRGAAPTVTSSERLVPDPPNDLRKEDVAMELERVGEDEEQMMIKRSSE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 CNPLLQEPIASAQFGATAGTECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 CNPLLQEPIASAQFGATAGTECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 KSSLANYLHKNGETSLKPEDFDFTVLSKRGIKSRYKDCSMAALTSHLQNQSNNSNWNLRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 KSSLANYLHKNGETSLKPEDFDFTVLSKRGIKSRYKDCSMAALTSHLQNQSNNSNWNLRT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 RSKCKKDVFMPPSSSSELQESRGLSNFTSTHLLLKEDEGVDDVNFRKVRKPKGKVTILKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 RSKCKKDVFMPPSSSSELQESRGLSNFTSTHLLLKEDEGVDDVNFRKVRKPKGKVTILKG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 IPIKKTKKGCRKSCSGFVQSDSKRESVCNKADAESEPVAQKSQLDRTVCISDAGACGETL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 IPIKKTKKGCRKSCSGFVQSDSKRESVCNKADAESEPVAQKSQLDRTVCISDAGACGETL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 SVTSEENSLVKKKERSLSSGSNFCSEQKTSGIINKFCSAKDSEHNEKYEDTFLESEEIGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 SVTSEENSLVKKKERSLSSGSNFCSEQKTSGIINKFCSAKDSEHNEKYEDTFLESEEIGT 310 320 330 340 350 360 370 380 390 400 410 pF1KE2 KVEVVERKEHLHTDILKRGSEMDNNCSPTRKDFT------EDTIPRTQIERRKTSLYFSS :::::::::::::::::::::::::::::::::: :::::::::::::::::::: NP_003 KVEVVERKEHLHTDILKRGSEMDNNCSPTRKDFTGEKIFQEDTIPRTQIERRKTSLYFSS 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE2 KYNKEALSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 KYNKEALSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWK 430 440 450 460 470 480 480 490 500 510 520 530 pF1KE2 FLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEYLTKQWKYPIELHGIGKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 FLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEYLTKQWKYPIELHGIGKY 490 500 510 520 530 540 540 550 560 570 pF1KE2 GNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENHEKLSLS :::::::::::::::::::::::::::::::::::::::: NP_003 GNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENHEKLSLS 550 560 570 580 >>NP_001263200 (OMIM: 603574) methyl-CpG-binding domain (572 aa) initn: 2598 init1: 2598 opt: 3639 Z-score: 3802.9 bits: 713.6 E(85289): 4.4e-205 Smith-Waterman score: 3639; 98.9% identity (98.9% similar) in 556 aa overlap (1-550:1-556) 10 20 30 40 50 60 pF1KE2 MGTTGLESLSLGDRGAAPTVTSSERLVPDPPNDLRKEDVAMELERVGEDEEQMMIKRSSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGTTGLESLSLGDRGAAPTVTSSERLVPDPPNDLRKEDVAMELERVGEDEEQMMIKRSSE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 CNPLLQEPIASAQFGATAGTECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 CNPLLQEPIASAQFGATAGTECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 KSSLANYLHKNGETSLKPEDFDFTVLSKRGIKSRYKDCSMAALTSHLQNQSNNSNWNLRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KSSLANYLHKNGETSLKPEDFDFTVLSKRGIKSRYKDCSMAALTSHLQNQSNNSNWNLRT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 RSKCKKDVFMPPSSSSELQESRGLSNFTSTHLLLKEDEGVDDVNFRKVRKPKGKVTILKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RSKCKKDVFMPPSSSSELQESRGLSNFTSTHLLLKEDEGVDDVNFRKVRKPKGKVTILKG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 IPIKKTKKGCRKSCSGFVQSDSKRESVCNKADAESEPVAQKSQLDRTVCISDAGACGETL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IPIKKTKKGCRKSCSGFVQSDSKRESVCNKADAESEPVAQKSQLDRTVCISDAGACGETL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 SVTSEENSLVKKKERSLSSGSNFCSEQKTSGIINKFCSAKDSEHNEKYEDTFLESEEIGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SVTSEENSLVKKKERSLSSGSNFCSEQKTSGIINKFCSAKDSEHNEKYEDTFLESEEIGT 310 320 330 340 350 360 370 380 390 400 410 pF1KE2 KVEVVERKEHLHTDILKRGSEMDNNCSPTRKDFT------EDTIPRTQIERRKTSLYFSS :::::::::::::::::::::::::::::::::: :::::::::::::::::::: NP_001 KVEVVERKEHLHTDILKRGSEMDNNCSPTRKDFTGEKIFQEDTIPRTQIERRKTSLYFSS 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE2 KYNKEALSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KYNKEALSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWK 430 440 450 460 470 480 480 490 500 510 520 530 pF1KE2 FLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEYLTKQWKYPIELHGIGKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEYLTKQWKYPIELHGIGKY 490 500 510 520 530 540 540 550 560 570 pF1KE2 GNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENHEKLSLS :::::::::::::::: NP_001 GNDSYRIFCVNEWKQVRLTPIHNSAHLVSEAK 550 560 570 >>NP_001263201 (OMIM: 603574) methyl-CpG-binding domain (540 aa) initn: 2598 init1: 2598 opt: 3505 Z-score: 3663.4 bits: 687.7 E(85289): 2.6e-197 Smith-Waterman score: 3505; 98.9% identity (98.9% similar) in 538 aa overlap (1-532:1-538) 10 20 30 40 50 60 pF1KE2 MGTTGLESLSLGDRGAAPTVTSSERLVPDPPNDLRKEDVAMELERVGEDEEQMMIKRSSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGTTGLESLSLGDRGAAPTVTSSERLVPDPPNDLRKEDVAMELERVGEDEEQMMIKRSSE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 CNPLLQEPIASAQFGATAGTECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 CNPLLQEPIASAQFGATAGTECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 KSSLANYLHKNGETSLKPEDFDFTVLSKRGIKSRYKDCSMAALTSHLQNQSNNSNWNLRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KSSLANYLHKNGETSLKPEDFDFTVLSKRGIKSRYKDCSMAALTSHLQNQSNNSNWNLRT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 RSKCKKDVFMPPSSSSELQESRGLSNFTSTHLLLKEDEGVDDVNFRKVRKPKGKVTILKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RSKCKKDVFMPPSSSSELQESRGLSNFTSTHLLLKEDEGVDDVNFRKVRKPKGKVTILKG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 IPIKKTKKGCRKSCSGFVQSDSKRESVCNKADAESEPVAQKSQLDRTVCISDAGACGETL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IPIKKTKKGCRKSCSGFVQSDSKRESVCNKADAESEPVAQKSQLDRTVCISDAGACGETL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 SVTSEENSLVKKKERSLSSGSNFCSEQKTSGIINKFCSAKDSEHNEKYEDTFLESEEIGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SVTSEENSLVKKKERSLSSGSNFCSEQKTSGIINKFCSAKDSEHNEKYEDTFLESEEIGT 310 320 330 340 350 360 370 380 390 400 410 pF1KE2 KVEVVERKEHLHTDILKRGSEMDNNCSPTRKDFT------EDTIPRTQIERRKTSLYFSS :::::::::::::::::::::::::::::::::: :::::::::::::::::::: NP_001 KVEVVERKEHLHTDILKRGSEMDNNCSPTRKDFTGEKIFQEDTIPRTQIERRKTSLYFSS 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE2 KYNKEALSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KYNKEALSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWK 430 440 450 460 470 480 480 490 500 510 520 530 pF1KE2 FLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEYLTKQWKYPIELHGIGKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEYLTKQWKYPIELHGIGAP 490 500 510 520 530 540 540 550 560 570 pF1KE2 GNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENHEKLSLS >>NP_001263202 (OMIM: 603574) methyl-CpG-binding domain (262 aa) initn: 1272 init1: 1246 opt: 1267 Z-score: 1332.1 bits: 255.3 E(85289): 1.9e-67 Smith-Waterman score: 1267; 80.8% identity (87.6% similar) in 234 aa overlap (341-574:29-262) 320 330 340 350 360 370 pF1KE2 KKKERSLSSGSNFCSEQKTSGIINKFCSAKDSEHNEKYEDTFLESEEIGTKVEVVERKEH : .. . ::. .: :..: : . :. NP_001 MGTTGLESLSLGDRGAAPTVTSSERLVPDPPNDLRKEDVAMELERVGEDEEQMMIKRS 10 20 30 40 50 380 390 400 410 420 430 pF1KE2 LHTDILKRGSEMDNNCSPTRKDFTEDTIPRTQIERRKTSLYFSSKYNKEALSPPRRKAFK . . : . . . . : .::::::::::::::::::::::::::::::::::: NP_001 SECNPLLQEPIASAQFGATAGTECQDTIPRTQIERRKTSLYFSSKYNKEALSPPRRKAFK 60 70 80 90 100 110 440 450 460 470 480 490 pF1KE2 KWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWKFLEKYPSAEVARTADW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWKFLEKYPSAEVARTADW 120 130 140 150 160 170 500 510 520 530 540 550 pF1KE2 RDVSELLKPLGLYDLRAKTIVKFSDEYLTKQWKYPIELHGIGKYGNDSYRIFCVNEWKQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RDVSELLKPLGLYDLRAKTIVKFSDEYLTKQWKYPIELHGIGKYGNDSYRIFCVNEWKQV 180 190 200 210 220 230 560 570 pF1KE2 HPEDHKLNKYHDWLWENHEKLSLS :::::::::::::::::::::::: NP_001 HPEDHKLNKYHDWLWENHEKLSLS 240 250 260 >>XP_011511570 (OMIM: 603574) PREDICTED: methyl-CpG-bind (185 aa) initn: 1253 init1: 1253 opt: 1253 Z-score: 1319.8 bits: 252.5 E(85289): 8.9e-67 Smith-Waterman score: 1253; 98.9% identity (100.0% similar) in 182 aa overlap (393-574:4-185) 370 380 390 400 410 420 pF1KE2 EVVERKEHLHTDILKRGSEMDNNCSPTRKDFTEDTIPRTQIERRKTSLYFSSKYNKEALS ..:::::::::::::::::::::::::::: XP_011 MCTLSEDTIPRTQIERRKTSLYFSSKYNKEALS 10 20 30 430 440 450 460 470 480 pF1KE2 PPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWKFLEKYPSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWKFLEKYPSA 40 50 60 70 80 90 490 500 510 520 530 540 pF1KE2 EVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEYLTKQWKYPIELHGIGKYGNDSYRIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EVARTADWRDVSELLKPLGLYDLRAKTIVKFSDEYLTKQWKYPIELHGIGKYGNDSYRIF 100 110 120 130 140 150 550 560 570 pF1KE2 CVNEWKQVHPEDHKLNKYHDWLWENHEKLSLS :::::::::::::::::::::::::::::::: XP_011 CVNEWKQVHPEDHKLNKYHDWLWENHEKLSLS 160 170 180 >>XP_011529468 (OMIM: 300005,300055,300260,300496,300673 (393 aa) initn: 276 init1: 249 opt: 258 Z-score: 275.9 bits: 60.4 E(85289): 1.3e-08 Smith-Waterman score: 258; 55.7% identity (75.7% similar) in 70 aa overlap (85-154:6-74) 60 70 80 90 100 110 pF1KE2 IKRSSECNPLLQEPIASAQFGATAGTECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQ ..: :: : .::: :..::..:::.:.:: XP_011 MYDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQ 10 20 30 120 130 140 150 160 170 pF1KE2 GLKFRSKSSLANYLHKNGETSLKPEDFDFTVLSKRGIKSRYKDCSMAALTSHLQNQSNNS : :::: : :..: :.::: :.:::::: . :: :: XP_011 GKAFRSKVELIAYFEKVGDTSLDPNDFDFTV-TGRGSPSRREQKPPKKPKSPKAPGTGRG 40 50 60 70 80 90 180 190 200 210 220 230 pF1KE2 NWNLRTRSKCKKDVFMPPSSSSELQESRGLSNFTSTHLLLKEDEGVDDVNFRKVRKPKGK XP_011 RGRPKGSGTTRPKAATSEGVQVKRVLEKSPGKLLVKMPFQTSPGGKAEGGGATTSTQVMV 100 110 120 130 140 150 >>NP_001303266 (OMIM: 300005,300055,300260,300496,300673 (393 aa) initn: 276 init1: 249 opt: 258 Z-score: 275.9 bits: 60.4 E(85289): 1.3e-08 Smith-Waterman score: 258; 55.7% identity (75.7% similar) in 70 aa overlap (85-154:6-74) 60 70 80 90 100 110 pF1KE2 IKRSSECNPLLQEPIASAQFGATAGTECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQ ..: :: : .::: :..::..:::.:.:: NP_001 MYDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQ 10 20 30 120 130 140 150 160 170 pF1KE2 GLKFRSKSSLANYLHKNGETSLKPEDFDFTVLSKRGIKSRYKDCSMAALTSHLQNQSNNS : :::: : :..: :.::: :.:::::: . :: :: NP_001 GKAFRSKVELIAYFEKVGDTSLDPNDFDFTV-TGRGSPSRREQKPPKKPKSPKAPGTGRG 40 50 60 70 80 90 180 190 200 210 220 230 pF1KE2 NWNLRTRSKCKKDVFMPPSSSSELQESRGLSNFTSTHLLLKEDEGVDDVNFRKVRKPKGK NP_001 RGRPKGSGTTRPKAATSEGVQVKRVLEKSPGKLLVKMPFQTSPGGKAEGGGATTSTQVMV 100 110 120 130 140 150 >>XP_016885022 (OMIM: 300005,300055,300260,300496,300673 (393 aa) initn: 276 init1: 249 opt: 258 Z-score: 275.9 bits: 60.4 E(85289): 1.3e-08 Smith-Waterman score: 258; 55.7% identity (75.7% similar) in 70 aa overlap (85-154:6-74) 60 70 80 90 100 110 pF1KE2 IKRSSECNPLLQEPIASAQFGATAGTECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQ ..: :: : .::: :..::..:::.:.:: XP_016 MYDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQ 10 20 30 120 130 140 150 160 170 pF1KE2 GLKFRSKSSLANYLHKNGETSLKPEDFDFTVLSKRGIKSRYKDCSMAALTSHLQNQSNNS : :::: : :..: :.::: :.:::::: . :: :: XP_016 GKAFRSKVELIAYFEKVGDTSLDPNDFDFTV-TGRGSPSRREQKPPKKPKSPKAPGTGRG 40 50 60 70 80 90 180 190 200 210 220 230 pF1KE2 NWNLRTRSKCKKDVFMPPSSSSELQESRGLSNFTSTHLLLKEDEGVDDVNFRKVRKPKGK XP_016 RGRPKGSGTTRPKAATSEGVQVKRVLEKSPGKLLVKMPFQTSPGGKAEGGGATTSTQVMV 100 110 120 130 140 150 >>XP_005274739 (OMIM: 300005,300055,300260,300496,300673 (393 aa) initn: 276 init1: 249 opt: 258 Z-score: 275.9 bits: 60.4 E(85289): 1.3e-08 Smith-Waterman score: 258; 55.7% identity (75.7% similar) in 70 aa overlap (85-154:6-74) 60 70 80 90 100 110 pF1KE2 IKRSSECNPLLQEPIASAQFGATAGTECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQ ..: :: : .::: :..::..:::.:.:: XP_005 MYDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQ 10 20 30 120 130 140 150 160 170 pF1KE2 GLKFRSKSSLANYLHKNGETSLKPEDFDFTVLSKRGIKSRYKDCSMAALTSHLQNQSNNS : :::: : :..: :.::: :.:::::: . :: :: XP_005 GKAFRSKVELIAYFEKVGDTSLDPNDFDFTV-TGRGSPSRREQKPPKKPKSPKAPGTGRG 40 50 60 70 80 90 180 190 200 210 220 230 pF1KE2 NWNLRTRSKCKKDVFMPPSSSSELQESRGLSNFTSTHLLLKEDEGVDDVNFRKVRKPKGK XP_005 RGRPKGSGTTRPKAATSEGVQVKRVLEKSPGKLLVKMPFQTSPGGKAEGGGATTSTQVMV 100 110 120 130 140 150 574 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 16:16:52 2016 done: Mon Nov 7 16:16:54 2016 Total Scan time: 10.420 Total Display time: 0.060 Function used was FASTA [36.3.4 Apr, 2011]