FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE2021, 599 aa
  1>>>pF1KE2021 599 - 599 aa - 599 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.0261+/-0.00108; mu= 10.4959+/- 0.065
 mean_var=91.6047+/-18.530, 0's: 0 Z-trim(105.3): 37  B-trim: 228 in 2/47
 Lambda= 0.134003
 statistics sampled from 8310 (8329) to 8310 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.619), E-opt: 0.2 (0.256), width:  16
 Scan time:  3.120

The best scores are:                                      opt bits E(32554)
CCDS9145.2 ANAPC7 gene_id:51434|Hs108|chr12        ( 599) 3884 761.4       0
CCDS44971.1 ANAPC7 gene_id:51434|Hs108|chr12       ( 537) 3452 677.9  9e-195


>>CCDS9145.2 ANAPC7 gene_id:51434|Hs108|chr12             (599 aa)
 initn: 3884 init1: 3884 opt: 3884  Z-score: 4060.8  bits: 761.4 E(32554):    0
Smith-Waterman score: 3884; 100.0% identity (100.0% similar) in 599 aa overlap (1-599:1-599)

               10        20        30        40        50        60
pF1KE2 MDPGDAAILESSLRILYRLFESVLPPLPAALQSRMNVIDHVRDMAAAGLHSNVRLLSSLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS91 MDPGDAAILESSLRILYRLFESVLPPLPAALQSRMNVIDHVRDMAAAGLHSNVRLLSSLL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 LTMSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS91 LTMSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPST
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 GNSASTPQSQCLPSEIEVKYKMAECYTMLKQDKDAIAILDGIPSRQRTPKINMMLANLYK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS91 GNSASTPQSQCLPSEIEVKYKMAECYTMLKQDKDAIAILDGIPSRQRTPKINMMLANLYK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 KAGQERPSVTSYKEVLRQCPLALDAILGLLSLSVKGAEVASMTMNVIQTVPNLDWLSVWI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS91 KAGQERPSVTSYKEVLRQCPLALDAILGLLSLSVKGAEVASMTMNVIQTVPNLDWLSVWI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 KAYAFVHTGDNSRAISTICSLEKKSLLRDNVDLLGSLADLYFRAGDNKNSVLKFEQAQML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS91 KAYAFVHTGDNSRAISTICSLEKKSLLRDNVDLLGSLADLYFRAGDNKNSVLKFEQAQML
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE2 DPYLIKGMDVYGYLLAREGRLEDVENLGCRLFNISDQHAEPWVVSGCHSFYSKRYSRALY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS91 DPYLIKGMDVYGYLLAREGRLEDVENLGCRLFNISDQHAEPWVVSGCHSFYSKRYSRALY
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE2 LGAKAIQLNSNSVQALLLKGAALRNMGRVQEAIIHFREAIRLAPCRLDCYEGLIECYLAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS91 LGAKAIQLNSNSVQALLLKGAALRNMGRVQEAIIHFREAIRLAPCRLDCYEGLIECYLAS
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE2 NSIREAMVMANNVYKTLGANAQTLTLLATVCLEDPVTQEKAKTLLDKALTQRPDYIKAVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS91 NSIREAMVMANNVYKTLGANAQTLTLLATVCLEDPVTQEKAKTLLDKALTQRPDYIKAVV
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE2 KKAELLSREQKYEDGIALLRNALANQSDCVLHRILGDFLVAVNEYQEAMDQYSIALSLDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS91 KKAELLSREQKYEDGIALLRNALANQSDCVLHRILGDFLVAVNEYQEAMDQYSIALSLDP
              490       500       510       520       530       540

              550       560       570       580       590         
pF1KE2 NDQKSLEGMQKMEKEESPTDATQEEDVDDMEGSGEEGDLEGSDSEAAQWADQEQWFGMQ
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS91 NDQKSLEGMQKMEKEESPTDATQEEDVDDMEGSGEEGDLEGSDSEAAQWADQEQWFGMQ
              550       560       570       580       590         

>>CCDS44971.1 ANAPC7 gene_id:51434|Hs108|chr12            (537 aa)
 initn: 3452 init1: 3452 opt: 3452  Z-score: 3610.2  bits: 677.9 E(32554): 9e-195
Smith-Waterman score: 3452; 100.0% identity (100.0% similar) in 536 aa overlap (1-536:1-536)

               10        20        30        40        50        60
pF1KE2 MDPGDAAILESSLRILYRLFESVLPPLPAALQSRMNVIDHVRDMAAAGLHSNVRLLSSLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MDPGDAAILESSLRILYRLFESVLPPLPAALQSRMNVIDHVRDMAAAGLHSNVRLLSSLL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 LTMSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LTMSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPST
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 GNSASTPQSQCLPSEIEVKYKMAECYTMLKQDKDAIAILDGIPSRQRTPKINMMLANLYK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GNSASTPQSQCLPSEIEVKYKMAECYTMLKQDKDAIAILDGIPSRQRTPKINMMLANLYK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 KAGQERPSVTSYKEVLRQCPLALDAILGLLSLSVKGAEVASMTMNVIQTVPNLDWLSVWI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KAGQERPSVTSYKEVLRQCPLALDAILGLLSLSVKGAEVASMTMNVIQTVPNLDWLSVWI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 KAYAFVHTGDNSRAISTICSLEKKSLLRDNVDLLGSLADLYFRAGDNKNSVLKFEQAQML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KAYAFVHTGDNSRAISTICSLEKKSLLRDNVDLLGSLADLYFRAGDNKNSVLKFEQAQML
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE2 DPYLIKGMDVYGYLLAREGRLEDVENLGCRLFNISDQHAEPWVVSGCHSFYSKRYSRALY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 DPYLIKGMDVYGYLLAREGRLEDVENLGCRLFNISDQHAEPWVVSGCHSFYSKRYSRALY
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE2 LGAKAIQLNSNSVQALLLKGAALRNMGRVQEAIIHFREAIRLAPCRLDCYEGLIECYLAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LGAKAIQLNSNSVQALLLKGAALRNMGRVQEAIIHFREAIRLAPCRLDCYEGLIECYLAS
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE2 NSIREAMVMANNVYKTLGANAQTLTLLATVCLEDPVTQEKAKTLLDKALTQRPDYIKAVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 NSIREAMVMANNVYKTLGANAQTLTLLATVCLEDPVTQEKAKTLLDKALTQRPDYIKAVV
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE2 KKAELLSREQKYEDGIALLRNALANQSDCVLHRILGDFLVAVNEYQEAMDQYSIALSLDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::    
CCDS44 KKAELLSREQKYEDGIALLRNALANQSDCVLHRILGDFLVAVNEYQEAMDQYSIALR   
              490       500       510       520       530          

              550       560       570       580       590         
pF1KE2 NDQKSLEGMQKMEKEESPTDATQEEDVDDMEGSGEEGDLEGSDSEAAQWADQEQWFGMQ




599 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 16:07:08 2016 done: Mon Nov  7 16:07:09 2016
 Total Scan time:  3.120 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]