FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2314, 2048 aa 1>>>pF1KE2314 2048 - 2048 aa - 2048 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.0137+/-0.00124; mu= 16.8017+/- 0.075 mean_var=101.9900+/-20.073, 0's: 0 Z-trim(102.8): 72 B-trim: 3 in 1/51 Lambda= 0.126998 statistics sampled from 7049 (7106) to 7049 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.552), E-opt: 0.2 (0.218), width: 16 Scan time: 4.950 The best scores are: opt bits E(32554) CCDS32070.1 FANCM gene_id:57697|Hs108|chr14 (2048) 13460 2478.3 0 CCDS76677.1 FANCM gene_id:57697|Hs108|chr14 (2022) 11746 2164.2 0 CCDS81802.1 FANCM gene_id:57697|Hs108|chr14 ( 669) 4425 822.7 0 CCDS6526.1 DDX58 gene_id:23586|Hs108|chr9 ( 925) 363 78.5 1.4e-13 >>CCDS32070.1 FANCM gene_id:57697|Hs108|chr14 (2048 aa) initn: 13460 init1: 13460 opt: 13460 Z-score: 13320.3 bits: 2478.3 E(32554): 0 Smith-Waterman score: 13460; 99.9% identity (100.0% similar) in 2048 aa overlap (1-2048:1-2048) 10 20 30 40 50 60 pF1KE2 MSGRQRTLFQTWGSSISRSSGTPGCSSGTERPQSPGSSKAPLPAAAEAQLESDDDVLLVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MSGRQRTLFQTWGSSISRSSGTPGCSSGTERPQSPGSSKAPLPAAAEAQLESDDDVLLVA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AYEAERQLCLENGGFCTSAGALWIYPTNCPVRDYQLHISRAALFCNTLVCLPTGLGKTFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 AYEAERQLCLENGGFCTSAGALWIYPTNCPVRDYQLHISRAALFCNTLVCLPTGLGKTFI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 AAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMAEMTGSTQASTRKEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 AAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMAEMTGSTQASTRKEI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 WCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 WCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 ILALSATPGSDIKAVQQVITNLLIGQIELRSEDSPDILTYSHERKVEKLIVPLGEELAAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 ILALSATPGSDIKAVQQVITNLLIGQIELRSEDSPDILTYSHERKVEKLIVPLGEELAAI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 QKTYIQILESFARSLIQRNVLMRRDIPNLTKYQIILARDQFRKNPSPNIVGIQQGIIEGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 QKTYIQILESFARSLIQRNVLMRRDIPNLTKYQIILARDQFRKNPSPNIVGIQQGIIEGE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 FAICISLYHGYELLQQMGMRSLYFFLCGIMDGTKGMTRSKNELGRNEDFMKLYNHLECMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 FAICISLYHGYELLQQMGMRSLYFFLCGIMDGTKGMTRSKNELGRNEDFMKLYNHLECMF 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 ARTRSTSANGISAIQQGDKNKKFVYSHPKLKKLEEVVIEHFKSWNAENTTEKKRDETRVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 ARTRSTSANGISAIQQGDKNKKFVYSHPKLKKLEEVVIEHFKSWNAENTTEKKRDETRVM 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 IFSSFRDSVQEIAEMLSQHQPIIRVMTFVGHASGKSTKGFTQKEQLEVVKQFRDGGYNTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 IFSSFRDSVQEIAEMLSQHQPIIRVMTFVGHASGKSTKGFTQKEQLEVVKQFRDGGYNTL 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 VSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQRMGRTGRKRQGRIVIILSEGREERIYNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 VSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQRMGRTGRKRQGRIVIILSEGREERIYNQ 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 SQSNKRSIYKAISSNRQVLHFYQRSPRMVPDGINPKLHKMFITHGVYEPEKPSRNLQRKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 SQSNKRSIYKAISSNRQVLHFYQRSPRMVPDGINPKLHKMFITHGVYEPEKPSRNLQRKS 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE2 SIFSYRDGMRQSSLKKDWFLSEEEFKLWNRLYRLRDSDEIKEITLPQVQFSSLQNEENKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 SIFSYRDGMRQSSLKKDWFLSEEEFKLWNRLYRLRDSDEIKEITLPQVQFSSLQNEENKP 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE2 AQESTTGIHQLSLSEWRLWQDHPLPTHQVDHSDRCRHFIGLMQMIEGMRHEEGECSYELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 AQESTTGIHQLSLSEWRLWQDHPLPTHQVDHSDRCRHFIGLMQMIEGMRHEEGECSYELE 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE2 VESYLQMEDVTSTFIAPRNESNNLASDTFITHKKSSFIKNINQGSSSSVIESDEECAEIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 VESYLQMEDVTSTFIAPRNESNNLASDTFITHKKSSFIKNINQGSSSSVIESDEECAEIV 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE2 KQTHIKPTKIVSLKKKVSKEIKKDQLKKENNHGIIDSLDNDRNSTVENIFQEDLPNDKRT :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: CCDS32 KQTHIKPTKIVSLKKKVSKEIKKDQLKKENNHGIIDSVDNDRNSTVENIFQEDLPNDKRT 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE2 SDTDEIAATCTINENVIKEPCVLLTECQFTNKSTSSLAGNVLDSGYNSFNDEKSVSSNLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 SDTDEIAATCTINENVIKEPCVLLTECQFTNKSTSSLAGNVLDSGYNSFNDEKSVSSNLF 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KE2 LPFEEELYIVRTDDQFYNCHSLTKEVLANVERFLSYSPPPLSGLSDLEYEIAKGTALENL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 LPFEEELYIVRTDDQFYNCHSLTKEVLANVERFLSYSPPPLSGLSDLEYEIAKGTALENL 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KE2 LFLPCAEHLRSDKCTCLLSHSAVNSQQNLELNSLKCINYPSEKSCLYDIPNDNISDEPSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 LFLPCAEHLRSDKCTCLLSHSAVNSQQNLELNSLKCINYPSEKSCLYDIPNDNISDEPSL 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KE2 CDCDVHKHNQNENLVPNNRVQIHRSPAQNLVGENNHDVDNSDLPVLSTDQDESLLLFEDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 CDCDVHKHNQNENLVPNNRVQIHRSPAQNLVGENNHDVDNSDLPVLSTDQDESLLLFEDV 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KE2 NTEFDDVSLSPLNSKSESLPVSDKTAISETPLVSQFLISDELLLDNNSELQDQITRDANS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 NTEFDDVSLSPLNSKSESLPVSDKTAISETPLVSQFLISDELLLDNNSELQDQITRDANS 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 pF1KE2 FKSRDQRGVQEEKVKNHEDIFDCSRDLFSVTFDLGFCSPDSDDEILEHTSDSNRPLDDLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 FKSRDQRGVQEEKVKNHEDIFDCSRDLFSVTFDLGFCSPDSDDEILEHTSDSNRPLDDLY 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 pF1KE2 GRYLEIKEISDANYVSNQALIPRDHSKNFTSGTVIIPSNEDMQNPNYVHLPLSAAKNEEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 GRYLEIKEISDANYVSNQALIPRDHSKNFTSGTVIIPSNEDMQNPNYVHLPLSAAKNEEL 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 pF1KE2 LSPGYSQFSLPVQKKVMSTPLSKSNTLNSFSKIRKEILKTPDSSKEKVNLQRFKEALNST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 LSPGYSQFSLPVQKKVMSTPLSKSNTLNSFSKIRKEILKTPDSSKEKVNLQRFKEALNST 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 pF1KE2 FDYSEFSLEKSKSSGPMYLHKSCHSVEDGQLLTSNESEDDEIFRRKVKRAKGNVLNSPED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 FDYSEFSLEKSKSSGPMYLHKSCHSVEDGQLLTSNESEDDEIFRRKVKRAKGNVLNSPED 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 pF1KE2 QKNSEVDSPLHAVKKRRFPVNRSELSSSDESENFPKPCSQLEDFKVCNGNARRGIKVPKR :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: CCDS32 QKNSEVDSPLHAVKKRRFPINRSELSSSDESENFPKPCSQLEDFKVCNGNARRGIKVPKR 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 pF1KE2 QSHLKHVARKFLDDEAELSEEDAEYVSSDENDESENEQDSSLLDFLNDETQLSQAINDSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 QSHLKHVARKFLDDEAELSEEDAEYVSSDENDESENEQDSSLLDFLNDETQLSQAINDSE 1510 1520 1530 1540 1550 1560 1570 1580 1590 1600 1610 1620 pF1KE2 MRAIYMKSLRSPMMNNKYKMIHKTHKNINIFSQIPEQDETYLEDSFCVDEEESCKGQSSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MRAIYMKSLRSPMMNNKYKMIHKTHKNINIFSQIPEQDETYLEDSFCVDEEESCKGQSSE 1570 1580 1590 1600 1610 1620 1630 1640 1650 1660 1670 1680 pF1KE2 EEVCVDFNLITDDCFANSKKYKTRRAVMLKEMMEQNCAHSKKKLSRIILPDDSSEEENNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 EEVCVDFNLITDDCFANSKKYKTRRAVMLKEMMEQNCAHSKKKLSRIILPDDSSEEENNV 1630 1640 1650 1660 1670 1680 1690 1700 1710 1720 1730 1740 pF1KE2 NDKRESNIAVNPSTVKKNKQQDHCLNSVPSGSSAQSKVRSTPRVNPLAKQSKQTSLNLKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 NDKRESNIAVNPSTVKKNKQQDHCLNSVPSGSSAQSKVRSTPRVNPLAKQSKQTSLNLKD 1690 1700 1710 1720 1730 1740 1750 1760 1770 1780 1790 1800 pF1KE2 TISEVSDFKPQNHNEVQSTTPPFTTVDSQKDCRKFPVPQKDGSALEDSSTSGASCSKSRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 TISEVSDFKPQNHNEVQSTTPPFTTVDSQKDCRKFPVPQKDGSALEDSSTSGASCSKSRP 1750 1760 1770 1780 1790 1800 1810 1820 1830 1840 1850 1860 pF1KE2 HLAGTHTSLRLAQEGKGTCILVGGHEITSGLEVISSLRAIHGLQVEVCPLNGCDYIVSNR ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 HLAGTHTSLRLPQEGKGTCILVGGHEITSGLEVISSLRAIHGLQVEVCPLNGCDYIVSNR 1810 1820 1830 1840 1850 1860 1870 1880 1890 1900 1910 1920 pF1KE2 MVVERRSQSEMLNSVNKNKFIEQIQHLQSMFERICVIVEKDREKTGDTSRMFRRTKSYDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MVVERRSQSEMLNSVNKNKFIEQIQHLQSMFERICVIVEKDREKTGDTSRMFRRTKSYDS 1870 1880 1890 1900 1910 1920 1930 1940 1950 1960 1970 1980 pF1KE2 LLTTLIGAGIRILFSSCQEETADLLKELSLVEQRKNVGIHVPTVVNSNKSEALQFYLSIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 LLTTLIGAGIRILFSSCQEETADLLKELSLVEQRKNVGIHVPTVVNSNKSEALQFYLSIP 1930 1940 1950 1960 1970 1980 1990 2000 2010 2020 2030 2040 pF1KE2 NISYITALNMCHQFSSVKRMANSSLQEISMYAQVTHQKAEEIYRYIHYVFDIQMLPNDLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 NISYITALNMCHQFSSVKRMANSSLQEISMYAQVTHQKAEEIYRYIHYVFDIQMLPNDLN 1990 2000 2010 2020 2030 2040 pF1KE2 QDRLKSDI :::::::: CCDS32 QDRLKSDI >>CCDS76677.1 FANCM gene_id:57697|Hs108|chr14 (2022 aa) initn: 11746 init1: 11746 opt: 11746 Z-score: 11623.2 bits: 2164.2 E(32554): 0 Smith-Waterman score: 13237; 98.6% identity (98.7% similar) in 2048 aa overlap (1-2048:1-2022) 10 20 30 40 50 60 pF1KE2 MSGRQRTLFQTWGSSISRSSGTPGCSSGTERPQSPGSSKAPLPAAAEAQLESDDDVLLVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MSGRQRTLFQTWGSSISRSSGTPGCSSGTERPQSPGSSKAPLPAAAEAQLESDDDVLLVA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AYEAERQLCLENGGFCTSAGALWIYPTNCPVRDYQLHISRAALFCNTLVCLPTGLGKTFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 AYEAERQLCLENGGFCTSAGALWIYPTNCPVRDYQLHISRAALFCNTLVCLPTGLGKTFI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 AAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMAEMTGSTQASTRKEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 AAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMAEMTGSTQASTRKEI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 WCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFR ::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 WCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYCQ------------- 190 200 210 220 250 260 270 280 290 300 pF1KE2 ILALSATPGSDIKAVQQVITNLLIGQIELRSEDSPDILTYSHERKVEKLIVPLGEELAAI ::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 -------------AVQQVITNLLIGQIELRSEDSPDILTYSHERKVEKLIVPLGEELAAI 230 240 250 260 270 310 320 330 340 350 360 pF1KE2 QKTYIQILESFARSLIQRNVLMRRDIPNLTKYQIILARDQFRKNPSPNIVGIQQGIIEGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 QKTYIQILESFARSLIQRNVLMRRDIPNLTKYQIILARDQFRKNPSPNIVGIQQGIIEGE 280 290 300 310 320 330 370 380 390 400 410 420 pF1KE2 FAICISLYHGYELLQQMGMRSLYFFLCGIMDGTKGMTRSKNELGRNEDFMKLYNHLECMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 FAICISLYHGYELLQQMGMRSLYFFLCGIMDGTKGMTRSKNELGRNEDFMKLYNHLECMF 340 350 360 370 380 390 430 440 450 460 470 480 pF1KE2 ARTRSTSANGISAIQQGDKNKKFVYSHPKLKKLEEVVIEHFKSWNAENTTEKKRDETRVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 ARTRSTSANGISAIQQGDKNKKFVYSHPKLKKLEEVVIEHFKSWNAENTTEKKRDETRVM 400 410 420 430 440 450 490 500 510 520 530 540 pF1KE2 IFSSFRDSVQEIAEMLSQHQPIIRVMTFVGHASGKSTKGFTQKEQLEVVKQFRDGGYNTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 IFSSFRDSVQEIAEMLSQHQPIIRVMTFVGHASGKSTKGFTQKEQLEVVKQFRDGGYNTL 460 470 480 490 500 510 550 560 570 580 590 600 pF1KE2 VSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQRMGRTGRKRQGRIVIILSEGREERIYNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 VSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQRMGRTGRKRQGRIVIILSEGREERIYNQ 520 530 540 550 560 570 610 620 630 640 650 660 pF1KE2 SQSNKRSIYKAISSNRQVLHFYQRSPRMVPDGINPKLHKMFITHGVYEPEKPSRNLQRKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 SQSNKRSIYKAISSNRQVLHFYQRSPRMVPDGINPKLHKMFITHGVYEPEKPSRNLQRKS 580 590 600 610 620 630 670 680 690 700 710 720 pF1KE2 SIFSYRDGMRQSSLKKDWFLSEEEFKLWNRLYRLRDSDEIKEITLPQVQFSSLQNEENKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 SIFSYRDGMRQSSLKKDWFLSEEEFKLWNRLYRLRDSDEIKEITLPQVQFSSLQNEENKP 640 650 660 670 680 690 730 740 750 760 770 780 pF1KE2 AQESTTGIHQLSLSEWRLWQDHPLPTHQVDHSDRCRHFIGLMQMIEGMRHEEGECSYELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 AQESTTGIHQLSLSEWRLWQDHPLPTHQVDHSDRCRHFIGLMQMIEGMRHEEGECSYELE 700 710 720 730 740 750 790 800 810 820 830 840 pF1KE2 VESYLQMEDVTSTFIAPRNESNNLASDTFITHKKSSFIKNINQGSSSSVIESDEECAEIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 VESYLQMEDVTSTFIAPRNESNNLASDTFITHKKSSFIKNINQGSSSSVIESDEECAEIV 760 770 780 790 800 810 850 860 870 880 890 900 pF1KE2 KQTHIKPTKIVSLKKKVSKEIKKDQLKKENNHGIIDSLDNDRNSTVENIFQEDLPNDKRT :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: CCDS76 KQTHIKPTKIVSLKKKVSKEIKKDQLKKENNHGIIDSVDNDRNSTVENIFQEDLPNDKRT 820 830 840 850 860 870 910 920 930 940 950 960 pF1KE2 SDTDEIAATCTINENVIKEPCVLLTECQFTNKSTSSLAGNVLDSGYNSFNDEKSVSSNLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 SDTDEIAATCTINENVIKEPCVLLTECQFTNKSTSSLAGNVLDSGYNSFNDEKSVSSNLF 880 890 900 910 920 930 970 980 990 1000 1010 1020 pF1KE2 LPFEEELYIVRTDDQFYNCHSLTKEVLANVERFLSYSPPPLSGLSDLEYEIAKGTALENL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 LPFEEELYIVRTDDQFYNCHSLTKEVLANVERFLSYSPPPLSGLSDLEYEIAKGTALENL 940 950 960 970 980 990 1030 1040 1050 1060 1070 1080 pF1KE2 LFLPCAEHLRSDKCTCLLSHSAVNSQQNLELNSLKCINYPSEKSCLYDIPNDNISDEPSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 LFLPCAEHLRSDKCTCLLSHSAVNSQQNLELNSLKCINYPSEKSCLYDIPNDNISDEPSL 1000 1010 1020 1030 1040 1050 1090 1100 1110 1120 1130 1140 pF1KE2 CDCDVHKHNQNENLVPNNRVQIHRSPAQNLVGENNHDVDNSDLPVLSTDQDESLLLFEDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 CDCDVHKHNQNENLVPNNRVQIHRSPAQNLVGENNHDVDNSDLPVLSTDQDESLLLFEDV 1060 1070 1080 1090 1100 1110 1150 1160 1170 1180 1190 1200 pF1KE2 NTEFDDVSLSPLNSKSESLPVSDKTAISETPLVSQFLISDELLLDNNSELQDQITRDANS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 NTEFDDVSLSPLNSKSESLPVSDKTAISETPLVSQFLISDELLLDNNSELQDQITRDANS 1120 1130 1140 1150 1160 1170 1210 1220 1230 1240 1250 1260 pF1KE2 FKSRDQRGVQEEKVKNHEDIFDCSRDLFSVTFDLGFCSPDSDDEILEHTSDSNRPLDDLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 FKSRDQRGVQEEKVKNHEDIFDCSRDLFSVTFDLGFCSPDSDDEILEHTSDSNRPLDDLY 1180 1190 1200 1210 1220 1230 1270 1280 1290 1300 1310 1320 pF1KE2 GRYLEIKEISDANYVSNQALIPRDHSKNFTSGTVIIPSNEDMQNPNYVHLPLSAAKNEEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 GRYLEIKEISDANYVSNQALIPRDHSKNFTSGTVIIPSNEDMQNPNYVHLPLSAAKNEEL 1240 1250 1260 1270 1280 1290 1330 1340 1350 1360 1370 1380 pF1KE2 LSPGYSQFSLPVQKKVMSTPLSKSNTLNSFSKIRKEILKTPDSSKEKVNLQRFKEALNST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 LSPGYSQFSLPVQKKVMSTPLSKSNTLNSFSKIRKEILKTPDSSKEKVNLQRFKEALNST 1300 1310 1320 1330 1340 1350 1390 1400 1410 1420 1430 1440 pF1KE2 FDYSEFSLEKSKSSGPMYLHKSCHSVEDGQLLTSNESEDDEIFRRKVKRAKGNVLNSPED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 FDYSEFSLEKSKSSGPMYLHKSCHSVEDGQLLTSNESEDDEIFRRKVKRAKGNVLNSPED 1360 1370 1380 1390 1400 1410 1450 1460 1470 1480 1490 1500 pF1KE2 QKNSEVDSPLHAVKKRRFPVNRSELSSSDESENFPKPCSQLEDFKVCNGNARRGIKVPKR :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: CCDS76 QKNSEVDSPLHAVKKRRFPINRSELSSSDESENFPKPCSQLEDFKVCNGNARRGIKVPKR 1420 1430 1440 1450 1460 1470 1510 1520 1530 1540 1550 1560 pF1KE2 QSHLKHVARKFLDDEAELSEEDAEYVSSDENDESENEQDSSLLDFLNDETQLSQAINDSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 QSHLKHVARKFLDDEAELSEEDAEYVSSDENDESENEQDSSLLDFLNDETQLSQAINDSE 1480 1490 1500 1510 1520 1530 1570 1580 1590 1600 1610 1620 pF1KE2 MRAIYMKSLRSPMMNNKYKMIHKTHKNINIFSQIPEQDETYLEDSFCVDEEESCKGQSSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MRAIYMKSLRSPMMNNKYKMIHKTHKNINIFSQIPEQDETYLEDSFCVDEEESCKGQSSE 1540 1550 1560 1570 1580 1590 1630 1640 1650 1660 1670 1680 pF1KE2 EEVCVDFNLITDDCFANSKKYKTRRAVMLKEMMEQNCAHSKKKLSRIILPDDSSEEENNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 EEVCVDFNLITDDCFANSKKYKTRRAVMLKEMMEQNCAHSKKKLSRIILPDDSSEEENNV 1600 1610 1620 1630 1640 1650 1690 1700 1710 1720 1730 1740 pF1KE2 NDKRESNIAVNPSTVKKNKQQDHCLNSVPSGSSAQSKVRSTPRVNPLAKQSKQTSLNLKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 NDKRESNIAVNPSTVKKNKQQDHCLNSVPSGSSAQSKVRSTPRVNPLAKQSKQTSLNLKD 1660 1670 1680 1690 1700 1710 1750 1760 1770 1780 1790 1800 pF1KE2 TISEVSDFKPQNHNEVQSTTPPFTTVDSQKDCRKFPVPQKDGSALEDSSTSGASCSKSRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 TISEVSDFKPQNHNEVQSTTPPFTTVDSQKDCRKFPVPQKDGSALEDSSTSGASCSKSRP 1720 1730 1740 1750 1760 1770 1810 1820 1830 1840 1850 1860 pF1KE2 HLAGTHTSLRLAQEGKGTCILVGGHEITSGLEVISSLRAIHGLQVEVCPLNGCDYIVSNR ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 HLAGTHTSLRLPQEGKGTCILVGGHEITSGLEVISSLRAIHGLQVEVCPLNGCDYIVSNR 1780 1790 1800 1810 1820 1830 1870 1880 1890 1900 1910 1920 pF1KE2 MVVERRSQSEMLNSVNKNKFIEQIQHLQSMFERICVIVEKDREKTGDTSRMFRRTKSYDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MVVERRSQSEMLNSVNKNKFIEQIQHLQSMFERICVIVEKDREKTGDTSRMFRRTKSYDS 1840 1850 1860 1870 1880 1890 1930 1940 1950 1960 1970 1980 pF1KE2 LLTTLIGAGIRILFSSCQEETADLLKELSLVEQRKNVGIHVPTVVNSNKSEALQFYLSIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 LLTTLIGAGIRILFSSCQEETADLLKELSLVEQRKNVGIHVPTVVNSNKSEALQFYLSIP 1900 1910 1920 1930 1940 1950 1990 2000 2010 2020 2030 2040 pF1KE2 NISYITALNMCHQFSSVKRMANSSLQEISMYAQVTHQKAEEIYRYIHYVFDIQMLPNDLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 NISYITALNMCHQFSSVKRMANSSLQEISMYAQVTHQKAEEIYRYIHYVFDIQMLPNDLN 1960 1970 1980 1990 2000 2010 pF1KE2 QDRLKSDI :::::::: CCDS76 QDRLKSDI 2020 >>CCDS81802.1 FANCM gene_id:57697|Hs108|chr14 (669 aa) initn: 4425 init1: 4425 opt: 4425 Z-score: 4381.7 bits: 822.7 E(32554): 0 Smith-Waterman score: 4425; 100.0% identity (100.0% similar) in 668 aa overlap (1-668:1-668) 10 20 30 40 50 60 pF1KE2 MSGRQRTLFQTWGSSISRSSGTPGCSSGTERPQSPGSSKAPLPAAAEAQLESDDDVLLVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MSGRQRTLFQTWGSSISRSSGTPGCSSGTERPQSPGSSKAPLPAAAEAQLESDDDVLLVA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AYEAERQLCLENGGFCTSAGALWIYPTNCPVRDYQLHISRAALFCNTLVCLPTGLGKTFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 AYEAERQLCLENGGFCTSAGALWIYPTNCPVRDYQLHISRAALFCNTLVCLPTGLGKTFI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 AAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMAEMTGSTQASTRKEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 AAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMAEMTGSTQASTRKEI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 WCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 WCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 ILALSATPGSDIKAVQQVITNLLIGQIELRSEDSPDILTYSHERKVEKLIVPLGEELAAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 ILALSATPGSDIKAVQQVITNLLIGQIELRSEDSPDILTYSHERKVEKLIVPLGEELAAI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 QKTYIQILESFARSLIQRNVLMRRDIPNLTKYQIILARDQFRKNPSPNIVGIQQGIIEGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 QKTYIQILESFARSLIQRNVLMRRDIPNLTKYQIILARDQFRKNPSPNIVGIQQGIIEGE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 FAICISLYHGYELLQQMGMRSLYFFLCGIMDGTKGMTRSKNELGRNEDFMKLYNHLECMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 FAICISLYHGYELLQQMGMRSLYFFLCGIMDGTKGMTRSKNELGRNEDFMKLYNHLECMF 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 ARTRSTSANGISAIQQGDKNKKFVYSHPKLKKLEEVVIEHFKSWNAENTTEKKRDETRVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 ARTRSTSANGISAIQQGDKNKKFVYSHPKLKKLEEVVIEHFKSWNAENTTEKKRDETRVM 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 IFSSFRDSVQEIAEMLSQHQPIIRVMTFVGHASGKSTKGFTQKEQLEVVKQFRDGGYNTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 IFSSFRDSVQEIAEMLSQHQPIIRVMTFVGHASGKSTKGFTQKEQLEVVKQFRDGGYNTL 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 VSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQRMGRTGRKRQGRIVIILSEGREERIYNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 VSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQRMGRTGRKRQGRIVIILSEGREERIYNQ 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 SQSNKRSIYKAISSNRQVLHFYQRSPRMVPDGINPKLHKMFITHGVYEPEKPSRNLQRKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 SQSNKRSIYKAISSNRQVLHFYQRSPRMVPDGINPKLHKMFITHGVYEPEKPSRNLQRKS 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE2 SIFSYRDGMRQSSLKKDWFLSEEEFKLWNRLYRLRDSDEIKEITLPQVQFSSLQNEENKP :::::::: CCDS81 SIFSYRDGK >>CCDS6526.1 DDX58 gene_id:23586|Hs108|chr9 (925 aa) initn: 169 init1: 108 opt: 363 Z-score: 357.2 bits: 78.5 E(32554): 1.4e-13 Smith-Waterman score: 403; 23.1% identity (55.6% similar) in 648 aa overlap (47-637:201-808) 20 30 40 50 60 70 pF1KE2 SRSSGTPGCSSGTERPQSPGSSKAPLPAAAEAQLESDDDVLLVAAYEAERQLCLENGGFC : ..:..: . . . : : ::. CCDS65 LKLALEKERNKFSELWIVEKGIKDVETEDLEDKMETSD-IQIFYQEDPECQNLSENSCPP 180 190 200 210 220 80 90 100 110 120 130 pF1KE2 TSAGALWIYPTNCPVRDYQLHISRAALFC-NTLVCLPTGLGKTFIAAVVMYNFYRWFPSG . .. .: : :.:::... :. ::..: ::: ::::.. .. . . ::.: CCDS65 SEVSDTNLYSPFKP-RNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQG 230 240 250 260 270 280 140 150 160 170 180 pF1KE2 ---KVVFMAPTKPLVTQQIEACYQVMGIPQSHMAEMTGSTQASTR----KEIWCSKRVLF ::::.: :. :: . . . . : ..:: . :... ..: .. ... CCDS65 QKGKVVFFANQIPVYEQQKSVFSKYF---ERHGYRVTGISGATAENVPVEQIVENNDIII 290 300 310 320 330 340 190 200 210 220 230 240 pF1KE2 LTPQVMVNDLSRGACPAAEIKCLVI-DEAHKALGNYAYCQVV-----RELVKYTNHF-RI ::::..::.:..:. :. : :.: :: :.. .. : ... ..: .. . .. CCDS65 LTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQV 350 360 370 380 390 400 250 260 270 280 290 300 pF1KE2 LALSATPG-SDIKAVQQVITNLLIGQIELRSEDSPDILTYSHERKVEKLIVPLGEELAAI ..:.:. : .: : ..... : .. : :. : : .:. . . .: ... . CCDS65 IGLTASVGVGDAKNTDEALD--YICKL-CASLDASVIATVKHNLEELEQVVYKPQKF--F 410 420 430 440 450 460 310 320 330 340 350 pF1KE2 QKTYIQILESFARSLIQ--RNV--LMRR---DIPNLTKYQIILARDQFRKNPSPNIVGIQ .:. .: ..: . : :.. : .: :. ::.. : :. .. :: .: CCDS65 RKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQ---NREFGTQKYEQWIVTVQ 470 480 490 500 510 360 370 380 390 400 410 pF1KE2 QGIIEGEFAICISLYHGYELLQQMGMRSLYFFLCGIMDGTKGMTRSKNELGRNEDFMKLY .. :. . . .. ..:... . . .. : : .: .: . CCDS65 KA--------CMVFQMPDKDEESRICKALFLYTSHLRKYNDALIIS--EHARMKDAL--- 520 530 540 550 560 420 430 440 450 460 470 pF1KE2 NHLECMFARTRSTSANGISAIQQGDKNKKFVYSHPKLKKLEEVVIEHFKSWNAENTTEKK ..:. .:. .: : :.. :.: : ...: . ::..:: : : . : . : CCDS65 DYLKDFFSNVR---AAGFDEIEQ-DLTQRF---EEKLQELESV------SRDPSNENPKL 570 580 590 600 610 480 490 500 510 pF1KE2 RD-------------ETRVMIFSSFRDSVQEIAEMLSQHQPI--IRVMTFVGHASGKSTK .: :: ...: . : :. . . . . . .. ..:... ... CCDS65 EDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGILTGRGKTNQNT 620 630 640 650 660 670 520 530 540 550 560 570 pF1KE2 GFTQKEQLEVVKQFR-DGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQRMGRT :.: : .. :. .: .: :..: :..::.::.. .:.: .. . :...: :: CCDS65 GMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGR- 680 690 700 710 720 730 580 590 600 610 pF1KE2 GRKRQGRIVIILSEG----------REERIYNQS----QSNKRSIYKA----ISSNRQVL :: : .. .. :.. .:...:.: :. ..... :..... . CCDS65 GRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFI 740 750 760 770 780 790 620 630 640 650 660 670 pF1KE2 HFYQRSPRMVPDGINPKLHKMFITHGVYEPEKPSRNLQRKSSIFSYRDGMRQSSLKKDWF . :..:. ::: : :: CCDS65 RDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHPKP 800 810 820 830 840 850 2048 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 19:46:06 2016 done: Sun Nov 6 19:46:07 2016 Total Scan time: 4.950 Total Display time: 0.290 Function used was FASTA [36.3.4 Apr, 2011]