Result of FASTA (ccds) for pFN21AE9663
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE9663, 372 aa
  1>>>pF1KE9663 372 - 372 aa - 372 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.4177+/-0.000954; mu= 12.7572+/- 0.058
 mean_var=107.7940+/-21.258, 0's: 0 Z-trim(109.1): 44  B-trim: 207 in 1/50
 Lambda= 0.123531
 statistics sampled from 10590 (10633) to 10590 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.684), E-opt: 0.2 (0.327), width:  16
 Scan time:  3.050

The best scores are:                                      opt bits E(32554)
CCDS4185.1 H2AFY gene_id:9555|Hs108|chr5           ( 372) 2348 428.9 3.4e-120
CCDS4183.1 H2AFY gene_id:9555|Hs108|chr5           ( 371) 2330 425.7 3.1e-119
CCDS4184.1 H2AFY gene_id:9555|Hs108|chr5           ( 369) 2196 401.8 4.8e-112
CCDS7296.1 H2AFY2 gene_id:55506|Hs108|chr10        ( 372) 1630 301.0 1.1e-81
CCDS8410.1 H2AFX gene_id:3014|Hs108|chr11          ( 143)  524 103.6 1.1e-22
CCDS938.1 HIST2H2AB gene_id:317772|Hs108|chr1      ( 130)  503 99.8 1.4e-21
CCDS4562.1 HIST1H2AA gene_id:221613|Hs108|chr6     ( 131)  501 99.5 1.8e-21
CCDS934.1 HIST2H2AA3 gene_id:8337|Hs108|chr1       ( 130)  500 99.3 2.1e-21
CCDS30849.1 HIST2H2AA4 gene_id:723790|Hs108|chr1   ( 130)  500 99.3 2.1e-21
CCDS937.1 HIST2H2AC gene_id:8338|Hs108|chr1        ( 129)  496 98.6 3.3e-21
CCDS1573.1 HIST3H2A gene_id:92815|Hs108|chr1       ( 130)  496 98.6 3.4e-21
CCDS4585.1 HIST1H2AC gene_id:8334|Hs108|chr6       ( 130)  495 98.4 3.8e-21
CCDS4591.1 HIST1H2AD gene_id:3013|Hs108|chr6       ( 130)  494 98.2 4.3e-21
CCDS4628.1 HIST1H2AJ gene_id:8331|Hs108|chr6       ( 128)  493 98.0 4.8e-21
CCDS4622.1 HIST1H2AH gene_id:85235|Hs108|chr6      ( 128)  493 98.0 4.8e-21
CCDS4595.1 HIST1H2AE gene_id:3012|Hs108|chr6       ( 130)  493 98.0 4.9e-21
CCDS4626.1 HIST1H2AI gene_id:8329|Hs108|chr6       ( 130)  493 98.0 4.9e-21
CCDS4619.1 HIST1H2AG gene_id:8969|Hs108|chr6       ( 130)  493 98.0 4.9e-21
CCDS4632.1 HIST1H2AK gene_id:8330|Hs108|chr6       ( 130)  493 98.0 4.9e-21
CCDS4574.1 HIST1H2AB gene_id:8335|Hs108|chr6       ( 130)  493 98.0 4.9e-21
CCDS4639.1 HIST1H2AM gene_id:8336|Hs108|chr6       ( 130)  493 98.0 4.9e-21
CCDS4634.1 HIST1H2AL gene_id:8332|Hs108|chr6       ( 130)  493 98.0 4.9e-21
CCDS31752.1 H2AFJ gene_id:55766|Hs108|chr12        ( 129)  492 97.8 5.5e-21
CCDS3654.1 H2AFZ gene_id:3015|Hs108|chr4           ( 128)  392 80.0 1.3e-15
CCDS5496.1 H2AFV gene_id:94239|Hs108|chr7          ( 128)  390 79.7 1.6e-15
CCDS5497.1 H2AFV gene_id:94239|Hs108|chr7          ( 102)  344 71.4   4e-13
CCDS5495.1 H2AFV gene_id:94239|Hs108|chr7          ( 114)  331 69.1 2.2e-12


>>CCDS4185.1 H2AFY gene_id:9555|Hs108|chr5                (372 aa)
 initn: 2348 init1: 2348 opt: 2348  Z-score: 2271.4  bits: 428.9 E(32554): 3.4e-120
Smith-Waterman score: 2348; 99.7% identity (99.7% similar) in 372 aa overlap (1-372:1-372)

               10        20        30        40        50        60
pF1KE9 MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE9 LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE9 KGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEGTPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 KGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEGTPA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE9 DGFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 DGFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE9 FVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGADKCEELLGKTVKNCLAL
       :::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
CCDS41 FVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGADKCEELLEKTVKNCLAL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE9 ADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 ADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIG
              310       320       330       340       350       360

              370  
pF1KE9 IYVQEMAKLDAN
       ::::::::::::
CCDS41 IYVQEMAKLDAN
              370  

>>CCDS4183.1 H2AFY gene_id:9555|Hs108|chr5                (371 aa)
 initn: 1379 init1: 1379 opt: 2330  Z-score: 2254.1  bits: 425.7 E(32554): 3.1e-119
Smith-Waterman score: 2330; 99.5% identity (99.5% similar) in 372 aa overlap (1-372:1-371)

               10        20        30        40        50        60
pF1KE9 MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE9 LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE9 KGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEGTPA
       :::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::
CCDS41 KGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKK-QGEVSKAASADSTTEGTPA
              130       140       150       160        170         

              190       200       210       220       230       240
pF1KE9 DGFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 DGFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKE
     180       190       200       210       220       230         

              250       260       270       280       290       300
pF1KE9 FVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGADKCEELLGKTVKNCLAL
       :::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
CCDS41 FVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGADKCEELLEKTVKNCLAL
     240       250       260       270       280       290         

              310       320       330       340       350       360
pF1KE9 ADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 ADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIG
     300       310       320       330       340       350         

              370  
pF1KE9 IYVQEMAKLDAN
       ::::::::::::
CCDS41 IYVQEMAKLDAN
     360       370 

>>CCDS4184.1 H2AFY gene_id:9555|Hs108|chr5                (369 aa)
 initn: 1284 init1: 1258 opt: 2196  Z-score: 2125.0  bits: 401.8 E(32554): 4.8e-112
Smith-Waterman score: 2196; 93.0% identity (97.8% similar) in 372 aa overlap (1-372:1-369)

               10        20        30        40        50        60
pF1KE9 MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE9 LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE9 KGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEGTPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 KGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEGTPA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE9 DGFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKE
       :::::::::::::::::......:   :... .:...:::.:. .  ..:::::::::::
CCDS41 DGFTVLSTKSLFLGQKLQVVQADI---ASIDSDAVVHPTNTDFYIGGEVGNTLEKKGGKE
              190       200          210       220       230       

              250       260       270       280       290       300
pF1KE9 FVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGADKCEELLGKTVKNCLAL
       :::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
CCDS41 FVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGADKCEELLEKTVKNCLAL
       240       250       260       270       280       290       

              310       320       330       340       350       360
pF1KE9 ADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 ADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIG
       300       310       320       330       340       350       

              370  
pF1KE9 IYVQEMAKLDAN
       ::::::::::::
CCDS41 IYVQEMAKLDAN
       360         

>>CCDS7296.1 H2AFY2 gene_id:55506|Hs108|chr10             (372 aa)
 initn: 1630 init1: 1630 opt: 1630  Z-score: 1579.8  bits: 301.0 E(32554): 1.1e-81
Smith-Waterman score: 1630; 67.7% identity (88.9% similar) in 371 aa overlap (1-371:1-371)

               10        20        30        40        50        60
pF1KE9 MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
       ::.:.:::: .: ::::.:::::::::..::.:::  ::::.::::::::::.:::.:::
CCDS72 MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE9 LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
       :::::::::::::.:..:::::::::::::::::::::::::::::: :::::::::::.
CCDS72 LELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKRGT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE9 KGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEGTPA
       ::: :.:..::: :.... .. :  .::. . :   ..:.:  . .: ....::.:  :.
CCDS72 KGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDGPG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE9 DGFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKE
       ::::.::.::: :::::.: .:.::......::.:..::.:.::::.:.:..::: ::::
CCDS72 DGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGGKE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE9 FVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGADKCEELLGKTVKNCLAL
       :.:.: ::::..:::::: :::: . :: :::::::. : ::.::::: : .:.::::. 
CCDS72 FLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCLSA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE9 ADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIG
       :.::::::.::: . :::: ::::::::. :::::..: .. .::.:.:::.::::::::
CCDS72 AEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSESIG
              310       320       330       340       350       360

              370  
pF1KE9 IYVQEMAKLDAN
       ::::::::::: 
CCDS72 IYVQEMAKLDAK
              370  

>>CCDS8410.1 H2AFX gene_id:3014|Hs108|chr11               (143 aa)
 initn: 529 init1: 507 opt: 524  Z-score: 520.5  bits: 103.6 E(32554): 1.1e-22
Smith-Waterman score: 524; 60.7% identity (77.2% similar) in 145 aa overlap (1-142:1-142)

                  10        20        30        40        50       
pF1KE9 MSSRG---GKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLT
       ::.::   :: ..   :::..::. :::::. : ..:::   :.:.:::::.::::::::
CCDS84 MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT
               10        20        30        40        50        60

        60        70        80        90       100       110       
pF1KE9 AEILELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKK
       :::::::::::::::: :. :::. ::. ::::::.:: :::::.:::::::.  :: ::
CCDS84 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK
               70        80        90       100       110       120

       120       130       140       150       160       170       
pF1KE9 RGSKGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEG
        ..    .:   :  .::: . ::.                                   
CCDS84 TSATVGPKA---PSGGKKATQASQEY                                  
                 130       140                                     

>>CCDS938.1 HIST2H2AB gene_id:317772|Hs108|chr1           (130 aa)
 initn: 500 init1: 500 opt: 503  Z-score: 500.8  bits: 99.8 E(32554): 1.4e-21
Smith-Waterman score: 503; 66.7% identity (81.3% similar) in 123 aa overlap (1-120:1-123)

                  10        20        30        40        50       
pF1KE9 MSSRG---GKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLT
       ::.::   :: ..   :::..::. :::::. : ..::.   :.:.:::::.::::::::
CCDS93 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
               10        20        30        40        50        60

        60        70        80        90       100       110       
pF1KE9 AEILELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKK
       :::::::::::::::: :. :::. ::: ::::::.:: :::::.:::::::.  :: ::
CCDS93 AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK
               70        80        90       100       110       120

       120       130       140       150       160       170       
pF1KE9 RGSKGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEG
         :                                                         
CCDS93 TESHKPGKNK                                                  
              130                                                  

>>CCDS4562.1 HIST1H2AA gene_id:221613|Hs108|chr6          (131 aa)
 initn: 498 init1: 498 opt: 501  Z-score: 498.8  bits: 99.5 E(32554): 1.8e-21
Smith-Waterman score: 501; 65.9% identity (82.1% similar) in 123 aa overlap (1-120:1-123)

                  10        20        30        40        50       
pF1KE9 MSSRG---GKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLT
       ::.::   :: .. . :::..::. :::::. : ..::.   :::.:::::.::::::::
CCDS45 MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT
               10        20        30        40        50        60

        60        70        80        90       100       110       
pF1KE9 AEILELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKK
       ::::::::::.::::: :. :::. ::. ::::::.:: :::::.:::::::.  :: ::
CCDS45 AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK
               70        80        90       100       110       120

       120       130       140       150       160       170       
pF1KE9 RGSKGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEG
         :                                                         
CCDS45 TESHHHKAQSK                                                 
              130                                                  

>>CCDS934.1 HIST2H2AA3 gene_id:8337|Hs108|chr1            (130 aa)
 initn: 497 init1: 497 opt: 500  Z-score: 497.9  bits: 99.3 E(32554): 2.1e-21
Smith-Waterman score: 500; 65.1% identity (80.2% similar) in 126 aa overlap (1-123:1-126)

                  10        20        30        40        50       
pF1KE9 MSSRG---GKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLT
       ::.::   :: ..   :::..::. :::::. : ..::.   :.:.::::::::::::::
CCDS93 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
               10        20        30        40        50        60

        60        70        80        90       100       110       
pF1KE9 AEILELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKK
       :::::::::::::::: :. :::. ::. ::::::.::  ::::.:::::::.  :: ::
CCDS93 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
               70        80        90       100       110       120

       120       130       140       150       160       170       
pF1KE9 RGSKGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEG
         :. :                                                      
CCDS93 TESHHKAKGK                                                  
              130                                                  

>>CCDS30849.1 HIST2H2AA4 gene_id:723790|Hs108|chr1        (130 aa)
 initn: 497 init1: 497 opt: 500  Z-score: 497.9  bits: 99.3 E(32554): 2.1e-21
Smith-Waterman score: 500; 65.1% identity (80.2% similar) in 126 aa overlap (1-123:1-126)

                  10        20        30        40        50       
pF1KE9 MSSRG---GKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLT
       ::.::   :: ..   :::..::. :::::. : ..::.   :.:.::::::::::::::
CCDS30 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
               10        20        30        40        50        60

        60        70        80        90       100       110       
pF1KE9 AEILELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKK
       :::::::::::::::: :. :::. ::. ::::::.::  ::::.:::::::.  :: ::
CCDS30 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
               70        80        90       100       110       120

       120       130       140       150       160       170       
pF1KE9 RGSKGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEG
         :. :                                                      
CCDS30 TESHHKAKGK                                                  
              130                                                  

>>CCDS937.1 HIST2H2AC gene_id:8338|Hs108|chr1             (129 aa)
 initn: 493 init1: 493 opt: 496  Z-score: 494.1  bits: 98.6 E(32554): 3.3e-21
Smith-Waterman score: 496; 65.9% identity (80.5% similar) in 123 aa overlap (1-120:1-123)

                  10        20        30        40        50       
pF1KE9 MSSRG---GKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLT
       ::.::   :: ..   :::..::. :::::. : ..::.   :.:.::::::::::::::
CCDS93 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
               10        20        30        40        50        60

        60        70        80        90       100       110       
pF1KE9 AEILELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKK
       :::::::::::::::: :. :::. ::. ::::::.::  ::::.:::::::.  :: ::
CCDS93 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
               70        80        90       100       110       120

       120       130       140       150       160       170       
pF1KE9 RGSKGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEG
         :                                                         
CCDS93 TESHKAKSK                                                   
                                                                   




372 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 19:58:55 2016 done: Sun Nov  6 19:58:55 2016
 Total Scan time:  3.050 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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