FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1535, 777 aa 1>>>pF1KE1535 777 - 777 aa - 777 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 13.4729+/-0.00107; mu= -14.9249+/- 0.064 mean_var=456.1553+/-95.484, 0's: 0 Z-trim(115.7): 48 B-trim: 0 in 0/53 Lambda= 0.060051 statistics sampled from 16205 (16247) to 16205 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.777), E-opt: 0.2 (0.499), width: 16 Scan time: 4.530 The best scores are: opt bits E(32554) CCDS11784.1 HGS gene_id:9146|Hs108|chr17 ( 777) 5205 465.5 1.5e-130 >>CCDS11784.1 HGS gene_id:9146|Hs108|chr17 (777 aa) initn: 5205 init1: 5205 opt: 5205 Z-score: 2457.5 bits: 465.5 E(32554): 1.5e-130 Smith-Waterman score: 5205; 100.0% identity (100.0% similar) in 777 aa overlap (1-777:1-777) 10 20 30 40 50 60 pF1KE1 MGRGSGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MGRGSGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAHAFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 ALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAHAFR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 NEPKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVMTRKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 NEPKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVMTRKH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 HCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCYEQLNRKAEGKATSTTELPPEYLTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 HCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCYEQLNRKAEGKATSTTELPPEYLTS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 PLSQQSQLPPKRDETALQEEEELQLALALSQSEAEEKERLRQKSTYTSYPKAEPMPSASS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 PLSQQSQLPPKRDETALQEEEELQLALALSQSEAEEKERLRQKSTYTSYPKAEPMPSASS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 APPASSLYSSPVNSSAPLAEDIDPELARYLNRNYWEKKQEEARKSPTPSAPVPLTEPAAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 APPASSLYSSPVNSSAPLAEDIDPELARYLNRNYWEKKQEEARKSPTPSAPVPLTEPAAQ 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 PGEGHAAPTNVVENPLPETDSQPIPPSGGPFSEPQFHNGESEESHEQFLKALQNAVTTFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 PGEGHAAPTNVVENPLPETDSQPIPPSGGPFSEPQFHNGESEESHEQFLKALQNAVTTFV 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 NRMKSNHMRGRSITNDSAVLSLFQSINGMHPQLLELLNQLDERRLYYEGLQDKLAQIRDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 NRMKSNHMRGRSITNDSAVLSLFQSINGMHPQLLELLNQLDERRLYYEGLQDKLAQIRDA 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE1 RGALSALREEHREKLRRAAEEAERQRQIQLAQKLEIMRQKKQEYLEVQRQLAIQRLQEQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 RGALSALREEHREKLRRAAEEAERQRQIQLAQKLEIMRQKKQEYLEVQRQLAIQRLQEQE 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE1 KERQMRLEQQKQTVQMRAQMPAFPLPYAQLQAMPAAGGVLYQPSGPASFPSTFSPAGSVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 KERQMRLEQQKQTVQMRAQMPAFPLPYAQLQAMPAAGGVLYQPSGPASFPSTFSPAGSVE 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE1 GSPMHGVYMSQPAPAAGPYPSMPSTAADPSMVSAYMYPAGATGAQAAPQAQAGPTASPAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 GSPMHGVYMSQPAPAAGPYPSMPSTAADPSMVSAYMYPAGATGAQAAPQAQAGPTASPAY 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE1 SSYQPTPTAGYQNVASQAPQSLPAISQPPQSSTMGYMGSQSVSMGYQPYNMQNLMTTLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 SSYQPTPTAGYQNVASQAPQSLPAISQPPQSSTMGYMGSQSVSMGYQPYNMQNLMTTLPS 670 680 690 700 710 720 730 740 750 760 770 pF1KE1 QDASLPPQQPYIAGQQPMYQQMAPSGGPPQQQPPVAQQPQAQGPPAQGSEAQLISFD ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 QDASLPPQQPYIAGQQPMYQQMAPSGGPPQQQPPVAQQPQAQGPPAQGSEAQLISFD 730 740 750 760 770 777 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 20:14:29 2016 done: Sun Nov 6 20:14:30 2016 Total Scan time: 4.530 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]