Result of FASTA (ccds) for
pFN21AE0931
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0931, 390 aa
1>>>pF1KE0931 390 - 390 aa - 390 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.4723+/-0.000722; mu= 12.5316+/- 0.044
mean_var=98.2555+/-19.301, 0's: 0 Z-trim(111.9): 11 B-trim: 0 in 0/51
Lambda= 0.129389
statistics sampled from 12732 (12743) to 12732 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.73), E-opt: 0.2 (0.391), width: 16
Scan time: 2.300
The best scores are: opt bits E(32554)
CCDS1050.1 ILF2 gene_id:3608|Hs108|chr1 ( 390) 2557 487.2 1.1e-137
CCDS72919.1 ILF2 gene_id:3608|Hs108|chr1 ( 352) 2260 431.7 5e-121
CCDS55337.1 STRBP gene_id:55342|Hs108|chr9 ( 658) 330 71.6 2.4e-12
CCDS6851.1 STRBP gene_id:55342|Hs108|chr9 ( 672) 330 71.6 2.4e-12
CCDS45966.1 ILF3 gene_id:3609|Hs108|chr19 ( 690) 326 70.8 4.1e-12
CCDS12247.1 ILF3 gene_id:3609|Hs108|chr19 ( 702) 326 70.8 4.2e-12
CCDS45967.1 ILF3 gene_id:3609|Hs108|chr19 ( 706) 326 70.8 4.2e-12
CCDS12246.1 ILF3 gene_id:3609|Hs108|chr19 ( 894) 326 70.9 5.1e-12
CCDS45965.1 ILF3 gene_id:3609|Hs108|chr19 ( 898) 326 70.9 5.2e-12
>>CCDS1050.1 ILF2 gene_id:3608|Hs108|chr1 (390 aa)
initn: 2557 init1: 2557 opt: 2557 Z-score: 2585.3 bits: 487.2 E(32554): 1.1e-137
Smith-Waterman score: 2557; 100.0% identity (100.0% similar) in 390 aa overlap (1-390:1-390)
10 20 30 40 50 60
pF1KE0 MRGDRGRGRGGRFGSRGGPGGGFRPFVPHIPFDFYLCEMAFPRVKPAPDETSFSEALLKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MRGDRGRGRGGRFGSRGGPGGGFRPFVPHIPFDFYLCEMAFPRVKPAPDETSFSEALLKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NQDLAPNSAEQASILSLVTKINNVIDNLIVAPGTFEVQIEEVRQVGSYKKGTMTTGHNVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 NQDLAPNSAEQASILSLVTKINNVIDNLIVAPGTFEVQIEEVRQVGSYKKGTMTTGHNVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 DLVVILKILPTLEAVAALGNKVVESLRAQDPSEVLTMLTNETGFEISSSDATVKILITTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DLVVILKILPTLEAVAALGNKVVESLRAQDPSEVLTMLTNETGFEISSSDATVKILITTV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 PPNLRKLDPELHLDIKVLQSALAAIRHARWFEENASQSTVKVLIRLLKDLRIRFPGFEPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PPNLRKLDPELHLDIKVLQSALAAIRHARWFEENASQSTVKVLIRLLKDLRIRFPGFEPL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 TPWILDLLGHYAVMNNPTRQPLALNVAYRRCLQILAAGLFLPGSVGITDPCESGNFRVHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 TPWILDLLGHYAVMNNPTRQPLALNVAYRRCLQILAAGLFLPGSVGITDPCESGNFRVHT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 VMTLEQQDMVCYTAQTLVRILSHGGFRKILGQEGDASYLASEISTWDGVIVTPSEKAYEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 VMTLEQQDMVCYTAQTLVRILSHGGFRKILGQEGDASYLASEISTWDGVIVTPSEKAYEK
310 320 330 340 350 360
370 380 390
pF1KE0 PPEKKEGEEEEENTEEPPQGEEEESMETQE
::::::::::::::::::::::::::::::
CCDS10 PPEKKEGEEEEENTEEPPQGEEEESMETQE
370 380 390
>>CCDS72919.1 ILF2 gene_id:3608|Hs108|chr1 (352 aa)
initn: 2260 init1: 2260 opt: 2260 Z-score: 2286.4 bits: 431.7 E(32554): 5e-121
Smith-Waterman score: 2260; 100.0% identity (100.0% similar) in 352 aa overlap (39-390:1-352)
10 20 30 40 50 60
pF1KE0 RGGRFGSRGGPGGGFRPFVPHIPFDFYLCEMAFPRVKPAPDETSFSEALLKRNQDLAPNS
::::::::::::::::::::::::::::::
CCDS72 MAFPRVKPAPDETSFSEALLKRNQDLAPNS
10 20 30
70 80 90 100 110 120
pF1KE0 AEQASILSLVTKINNVIDNLIVAPGTFEVQIEEVRQVGSYKKGTMTTGHNVADLVVILKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 AEQASILSLVTKINNVIDNLIVAPGTFEVQIEEVRQVGSYKKGTMTTGHNVADLVVILKI
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE0 LPTLEAVAALGNKVVESLRAQDPSEVLTMLTNETGFEISSSDATVKILITTVPPNLRKLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 LPTLEAVAALGNKVVESLRAQDPSEVLTMLTNETGFEISSSDATVKILITTVPPNLRKLD
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE0 PELHLDIKVLQSALAAIRHARWFEENASQSTVKVLIRLLKDLRIRFPGFEPLTPWILDLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 PELHLDIKVLQSALAAIRHARWFEENASQSTVKVLIRLLKDLRIRFPGFEPLTPWILDLL
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE0 GHYAVMNNPTRQPLALNVAYRRCLQILAAGLFLPGSVGITDPCESGNFRVHTVMTLEQQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 GHYAVMNNPTRQPLALNVAYRRCLQILAAGLFLPGSVGITDPCESGNFRVHTVMTLEQQD
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE0 MVCYTAQTLVRILSHGGFRKILGQEGDASYLASEISTWDGVIVTPSEKAYEKPPEKKEGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 MVCYTAQTLVRILSHGGFRKILGQEGDASYLASEISTWDGVIVTPSEKAYEKPPEKKEGE
280 290 300 310 320 330
370 380 390
pF1KE0 EEEENTEEPPQGEEEESMETQE
::::::::::::::::::::::
CCDS72 EEEENTEEPPQGEEEESMETQE
340 350
>>CCDS55337.1 STRBP gene_id:55342|Hs108|chr9 (658 aa)
initn: 245 init1: 172 opt: 330 Z-score: 335.2 bits: 71.6 E(32554): 2.4e-12
Smith-Waterman score: 343; 27.0% identity (58.0% similar) in 293 aa overlap (102-373:71-356)
80 90 100 110 120 130
pF1KE0 ASILSLVTKINNVIDNLIVAPGTFEVQIEEVRQVGSYKKGTMTTGHNVADLVVILKILPT
: ..: :: . .::.. : ::
CCDS55 GTKTEGETEVKKDEAGENYSKDQGGRTLCGVMRIGLVAKGLLIKDDMDLELVLMCKDKPT
50 60 70 80 90 100
140 150 160 170 180
pF1KE0 LEAVAALGNKV-VESLRAQDPSEVLTMLTNETGFEISSSDA---TVKILITT--VPPNLR
. .. ... .. . . . . . .::... : .. :.:...:. . .:.
CCDS55 ETLLNTVKDNLPIQIQKLTEEKYQVEQCVNEASIIIRNTKEPTLTLKVILTSPLIRDELE
110 120 130 140 150 160
190 200 210 220 230
pF1KE0 KLD---------PELHLDIKVLQSALAAIRHARWFEENAS--QSTVKVLIRLLKDLRIRF
: : :.: :: . .:::..:::.::. :. .: : ...:.:.:: :
CCDS55 KKDGENVSMKDPPDL-LDRQKCLNALASLRHAKWFQARANGLKSCV-IVLRILRDLCNRV
170 180 190 200 210
240 250 260 270 280 290
pF1KE0 PGFEPLTPWILDLLGHYAVMNNPTRQPLALNVAYRRCLQILAAGLFLPGSVGITDPCESG
: . :: : :.:. . .. . .::. . : :: .. ::.:..:::. :. ::::
CCDS55 PTWAPLKGWPLELICEKSI--GTCNRPLGAGEALRRVMECLASGILLPGGPGLHDPCERD
220 230 240 250 260 270
300 310 320 330 340 350
pF1KE0 NFRVHTVMTLEQQDMVCYTAQTLVRILSHGGFRKILGQEGDASYLASEISTWDGVIVTPS
. . ::..:.. . ..:: .:. . : . :.: .. : . .:. :: .
CCDS55 PTDALSYMTIQQKEDITHSAQHALRLSAFGQIYKVLEMDPLPSSKPFQKYSWS---VTDK
280 290 300 310 320 330
360 370 380 390
pF1KE0 E----KAYEKPPEKKEGEEEEENTEEPPQGEEEESMETQE
: .: ..: : :.... :
CCDS55 EGAGSSALKRPFEDGLGDDKDPNKKMKRNLRKILDSKAIDLMNALMRLNQIRPGLQYKLL
340 350 360 370 380 390
>>CCDS6851.1 STRBP gene_id:55342|Hs108|chr9 (672 aa)
initn: 245 init1: 172 opt: 330 Z-score: 335.1 bits: 71.6 E(32554): 2.4e-12
Smith-Waterman score: 343; 27.0% identity (58.0% similar) in 293 aa overlap (102-373:85-370)
80 90 100 110 120 130
pF1KE0 ASILSLVTKINNVIDNLIVAPGTFEVQIEEVRQVGSYKKGTMTTGHNVADLVVILKILPT
: ..: :: . .::.. : ::
CCDS68 GTKTEGETEVKKDEAGENYSKDQGGRTLCGVMRIGLVAKGLLIKDDMDLELVLMCKDKPT
60 70 80 90 100 110
140 150 160 170 180
pF1KE0 LEAVAALGNKV-VESLRAQDPSEVLTMLTNETGFEISSSDA---TVKILITT--VPPNLR
. .. ... .. . . . . . .::... : .. :.:...:. . .:.
CCDS68 ETLLNTVKDNLPIQIQKLTEEKYQVEQCVNEASIIIRNTKEPTLTLKVILTSPLIRDELE
120 130 140 150 160 170
190 200 210 220 230
pF1KE0 KLD---------PELHLDIKVLQSALAAIRHARWFEENAS--QSTVKVLIRLLKDLRIRF
: : :.: :: . .:::..:::.::. :. .: : ...:.:.:: :
CCDS68 KKDGENVSMKDPPDL-LDRQKCLNALASLRHAKWFQARANGLKSCV-IVLRILRDLCNRV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE0 PGFEPLTPWILDLLGHYAVMNNPTRQPLALNVAYRRCLQILAAGLFLPGSVGITDPCESG
: . :: : :.:. . .. . .::. . : :: .. ::.:..:::. :. ::::
CCDS68 PTWAPLKGWPLELICEKSI--GTCNRPLGAGEALRRVMECLASGILLPGGPGLHDPCERD
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE0 NFRVHTVMTLEQQDMVCYTAQTLVRILSHGGFRKILGQEGDASYLASEISTWDGVIVTPS
. . ::..:.. . ..:: .:. . : . :.: .. : . .:. :: .
CCDS68 PTDALSYMTIQQKEDITHSAQHALRLSAFGQIYKVLEMDPLPSSKPFQKYSWS---VTDK
300 310 320 330 340
360 370 380 390
pF1KE0 E----KAYEKPPEKKEGEEEEENTEEPPQGEEEESMETQE
: .: ..: : :.... :
CCDS68 EGAGSSALKRPFEDGLGDDKDPNKKMKRNLRKILDSKAIDLMNALMRLNQIRPGLQYKLL
350 360 370 380 390 400
>>CCDS45966.1 ILF3 gene_id:3609|Hs108|chr19 (690 aa)
initn: 249 init1: 141 opt: 326 Z-score: 330.9 bits: 70.8 E(32554): 4.1e-12
Smith-Waterman score: 353; 27.8% identity (55.3% similar) in 313 aa overlap (102-390:92-395)
80 90 100 110 120 130
pF1KE0 ASILSLVTKINNVIDNLIVAPGTFEVQIEEVRQVGSYKKGTMTTGHNVADLVVILKILPT
: .:: :: . : .::.. : ::
CCDS45 SDNMDVPPEDDSKEGAGEQKTEHMTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKEKPT
70 80 90 100 110 120
140 150 160 170 180
pF1KE0 LEAVAALGNKVVESLRAQ------DPSEVLTMLTNETGFEISSSDATVKILITTVPPNLR
.:: .::...: : : :.: . . . .... ... : . : .:
CCDS45 ----TALLDKVADNLAIQLAAVTEDKYEILQSVDDAAIVIKNTKEPPLSLTIHLTSPVVR
130 140 150 160 170
190 200 210 220 230
pF1KE0 KL-------------DPELHLDIKVLQSALAAIRHARWFEENAS--QSTVKVLIRLLKDL
. :: :: . .:::..:::.::. :. .: : ..::.:.::
CCDS45 EEMEKVLAGETLSVNDPPDVLDRQKCLAALASLRHAKWFQARANGLKSCV-IVIRVLRDL
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE0 RIRFPGFEPLTPWILDLLGHYAVMNNPTRQPLALNVAYRRCLQILAAGLFLPGSVGITDP
: : . :: : :.:: . .. . . .:.. . : :: :. ::.:. .: . :: ::
CCDS45 CTRVPTWGPLRGWPLELLCEKSI--GTANRPMGAGEALRRVLECLASGIVMPDGSGIYDP
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE0 CESGNFRVHTVMTLEQQDMVCYTAQTLVRILSHGGFRKILGQEGDASYLASEISTWDGVI
::. . . .:.. . .:: .:. . : ..:.::.. : . .. .. . :
CCDS45 CEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVD
300 310 320 330 340 350
360 370 380 390
pF1KE0 VT---PSEKAYEKPPEKKEGEEEEENTEEPPQGEEEESMETQE
: : .: : :. ::. : :. :. .... .. .:
CCDS45 YTVQIPPSTTYAITPMKRPMEEDGE--EKSPSKKKKKIQKKEEKAEPPQAMNALMRLNQL
360 370 380 390 400 410
CCDS45 KPGLQYKLVSQTGPVHAPIFTMSVEVDGNSFEASGPSKKTAKLHVAVKVLQDMGLPTGAE
420 430 440 450 460 470
>>CCDS12247.1 ILF3 gene_id:3609|Hs108|chr19 (702 aa)
initn: 249 init1: 141 opt: 326 Z-score: 330.8 bits: 70.8 E(32554): 4.2e-12
Smith-Waterman score: 353; 27.8% identity (55.3% similar) in 313 aa overlap (102-390:92-395)
80 90 100 110 120 130
pF1KE0 ASILSLVTKINNVIDNLIVAPGTFEVQIEEVRQVGSYKKGTMTTGHNVADLVVILKILPT
: .:: :: . : .::.. : ::
CCDS12 SDNMDVPPEDDSKEGAGEQKTEHMTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKEKPT
70 80 90 100 110 120
140 150 160 170 180
pF1KE0 LEAVAALGNKVVESLRAQ------DPSEVLTMLTNETGFEISSSDATVKILITTVPPNLR
.:: .::...: : : :.: . . . .... ... : . : .:
CCDS12 ----TALLDKVADNLAIQLAAVTEDKYEILQSVDDAAIVIKNTKEPPLSLTIHLTSPVVR
130 140 150 160 170
190 200 210 220 230
pF1KE0 KL-------------DPELHLDIKVLQSALAAIRHARWFEENAS--QSTVKVLIRLLKDL
. :: :: . .:::..:::.::. :. .: : ..::.:.::
CCDS12 EEMEKVLAGETLSVNDPPDVLDRQKCLAALASLRHAKWFQARANGLKSCV-IVIRVLRDL
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE0 RIRFPGFEPLTPWILDLLGHYAVMNNPTRQPLALNVAYRRCLQILAAGLFLPGSVGITDP
: : . :: : :.:: . .. . . .:.. . : :: :. ::.:. .: . :: ::
CCDS12 CTRVPTWGPLRGWPLELLCEKSI--GTANRPMGAGEALRRVLECLASGIVMPDGSGIYDP
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE0 CESGNFRVHTVMTLEQQDMVCYTAQTLVRILSHGGFRKILGQEGDASYLASEISTWDGVI
::. . . .:.. . .:: .:. . : ..:.::.. : . .. .. . :
CCDS12 CEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVD
300 310 320 330 340 350
360 370 380 390
pF1KE0 VT---PSEKAYEKPPEKKEGEEEEENTEEPPQGEEEESMETQE
: : .: : :. ::. : :. :. .... .. .:
CCDS12 YTVQIPPSTTYAITPMKRPMEEDGE--EKSPSKKKKKIQKKEEKAEPPQAMNALMRLNQL
360 370 380 390 400 410
CCDS12 KPGLQYKLVSQTGPVHAPIFTMSVEVDGNSFEASGPSKKTAKLHVAVKVLQDMGLPTGAE
420 430 440 450 460 470
>>CCDS45967.1 ILF3 gene_id:3609|Hs108|chr19 (706 aa)
initn: 213 init1: 141 opt: 326 Z-score: 330.7 bits: 70.8 E(32554): 4.2e-12
Smith-Waterman score: 353; 27.8% identity (55.3% similar) in 313 aa overlap (102-390:92-395)
80 90 100 110 120 130
pF1KE0 ASILSLVTKINNVIDNLIVAPGTFEVQIEEVRQVGSYKKGTMTTGHNVADLVVILKILPT
: .:: :: . : .::.. : ::
CCDS45 SDNMDVPPEDDSKEGAGEQKTEHMTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKEKPT
70 80 90 100 110 120
140 150 160 170 180
pF1KE0 LEAVAALGNKVVESLRAQ------DPSEVLTMLTNETGFEISSSDATVKILITTVPPNLR
.:: .::...: : : :.: . . . .... ... : . : .:
CCDS45 ----TALLDKVADNLAIQLAAVTEDKYEILQSVDDAAIVIKNTKEPPLSLTIHLTSPVVR
130 140 150 160 170
190 200 210 220 230
pF1KE0 KL-------------DPELHLDIKVLQSALAAIRHARWFEENAS--QSTVKVLIRLLKDL
. :: :: . .:::..:::.::. :. .: : ..::.:.::
CCDS45 EEMEKVLAGETLSVNDPPDVLDRQKCLAALASLRHAKWFQARANGLKSCV-IVIRVLRDL
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE0 RIRFPGFEPLTPWILDLLGHYAVMNNPTRQPLALNVAYRRCLQILAAGLFLPGSVGITDP
: : . :: : :.:: . .. . . .:.. . : :: :. ::.:. .: . :: ::
CCDS45 CTRVPTWGPLRGWPLELLCEKSI--GTANRPMGAGEALRRVLECLASGIVMPDGSGIYDP
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE0 CESGNFRVHTVMTLEQQDMVCYTAQTLVRILSHGGFRKILGQEGDASYLASEISTWDGVI
::. . . .:.. . .:: .:. . : ..:.::.. : . .. .. . :
CCDS45 CEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVD
300 310 320 330 340 350
360 370 380 390
pF1KE0 VT---PSEKAYEKPPEKKEGEEEEENTEEPPQGEEEESMETQE
: : .: : :. ::. : :. :. .... .. .:
CCDS45 YTVQIPPSTTYAITPMKRPMEEDGE--EKSPSKKKKKIQKKEEKAEPPQAMNALMRLNQL
360 370 380 390 400 410
CCDS45 KPGLQYKLVSQTGPVHAPIFTMSVEVDGNSFEASGPSKKTAKLHVAVKVLQDMGLPTGAE
420 430 440 450 460 470
>>CCDS12246.1 ILF3 gene_id:3609|Hs108|chr19 (894 aa)
initn: 213 init1: 141 opt: 326 Z-score: 329.2 bits: 70.9 E(32554): 5.1e-12
Smith-Waterman score: 353; 27.8% identity (55.3% similar) in 313 aa overlap (102-390:92-395)
80 90 100 110 120 130
pF1KE0 ASILSLVTKINNVIDNLIVAPGTFEVQIEEVRQVGSYKKGTMTTGHNVADLVVILKILPT
: .:: :: . : .::.. : ::
CCDS12 SDNMDVPPEDDSKEGAGEQKTEHMTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKEKPT
70 80 90 100 110 120
140 150 160 170 180
pF1KE0 LEAVAALGNKVVESLRAQ------DPSEVLTMLTNETGFEISSSDATVKILITTVPPNLR
.:: .::...: : : :.: . . . .... ... : . : .:
CCDS12 ----TALLDKVADNLAIQLAAVTEDKYEILQSVDDAAIVIKNTKEPPLSLTIHLTSPVVR
130 140 150 160 170
190 200 210 220 230
pF1KE0 KL-------------DPELHLDIKVLQSALAAIRHARWFEENAS--QSTVKVLIRLLKDL
. :: :: . .:::..:::.::. :. .: : ..::.:.::
CCDS12 EEMEKVLAGETLSVNDPPDVLDRQKCLAALASLRHAKWFQARANGLKSCV-IVIRVLRDL
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE0 RIRFPGFEPLTPWILDLLGHYAVMNNPTRQPLALNVAYRRCLQILAAGLFLPGSVGITDP
: : . :: : :.:: . .. . . .:.. . : :: :. ::.:. .: . :: ::
CCDS12 CTRVPTWGPLRGWPLELLCEKSI--GTANRPMGAGEALRRVLECLASGIVMPDGSGIYDP
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE0 CESGNFRVHTVMTLEQQDMVCYTAQTLVRILSHGGFRKILGQEGDASYLASEISTWDGVI
::. . . .:.. . .:: .:. . : ..:.::.. : . .. .. . :
CCDS12 CEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVD
300 310 320 330 340 350
360 370 380 390
pF1KE0 VT---PSEKAYEKPPEKKEGEEEEENTEEPPQGEEEESMETQE
: : .: : :. ::. : :. :. .... .. .:
CCDS12 YTVQIPPSTTYAITPMKRPMEEDGE--EKSPSKKKKKIQKKEEKAEPPQAMNALMRLNQL
360 370 380 390 400 410
CCDS12 KPGLQYKLVSQTGPVHAPIFTMSVEVDGNSFEASGPSKKTAKLHVAVKVLQDMGLPTGAE
420 430 440 450 460 470
>>CCDS45965.1 ILF3 gene_id:3609|Hs108|chr19 (898 aa)
initn: 213 init1: 141 opt: 326 Z-score: 329.1 bits: 70.9 E(32554): 5.2e-12
Smith-Waterman score: 353; 27.8% identity (55.3% similar) in 313 aa overlap (102-390:92-395)
80 90 100 110 120 130
pF1KE0 ASILSLVTKINNVIDNLIVAPGTFEVQIEEVRQVGSYKKGTMTTGHNVADLVVILKILPT
: .:: :: . : .::.. : ::
CCDS45 SDNMDVPPEDDSKEGAGEQKTEHMTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKEKPT
70 80 90 100 110 120
140 150 160 170 180
pF1KE0 LEAVAALGNKVVESLRAQ------DPSEVLTMLTNETGFEISSSDATVKILITTVPPNLR
.:: .::...: : : :.: . . . .... ... : . : .:
CCDS45 ----TALLDKVADNLAIQLAAVTEDKYEILQSVDDAAIVIKNTKEPPLSLTIHLTSPVVR
130 140 150 160 170
190 200 210 220 230
pF1KE0 KL-------------DPELHLDIKVLQSALAAIRHARWFEENAS--QSTVKVLIRLLKDL
. :: :: . .:::..:::.::. :. .: : ..::.:.::
CCDS45 EEMEKVLAGETLSVNDPPDVLDRQKCLAALASLRHAKWFQARANGLKSCV-IVIRVLRDL
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE0 RIRFPGFEPLTPWILDLLGHYAVMNNPTRQPLALNVAYRRCLQILAAGLFLPGSVGITDP
: : . :: : :.:: . .. . . .:.. . : :: :. ::.:. .: . :: ::
CCDS45 CTRVPTWGPLRGWPLELLCEKSI--GTANRPMGAGEALRRVLECLASGIVMPDGSGIYDP
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE0 CESGNFRVHTVMTLEQQDMVCYTAQTLVRILSHGGFRKILGQEGDASYLASEISTWDGVI
::. . . .:.. . .:: .:. . : ..:.::.. : . .. .. . :
CCDS45 CEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVD
300 310 320 330 340 350
360 370 380 390
pF1KE0 VT---PSEKAYEKPPEKKEGEEEEENTEEPPQGEEEESMETQE
: : .: : :. ::. : :. :. .... .. .:
CCDS45 YTVQIPPSTTYAITPMKRPMEEDGE--EKSPSKKKKKIQKKEEKAEPPQAMNALMRLNQL
360 370 380 390 400 410
CCDS45 KPGLQYKLVSQTGPVHAPIFTMSVEVDGNSFEASGPSKKTAKLHVAVKVLQDMGLPTGAE
420 430 440 450 460 470
390 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 04:34:29 2016 done: Sat Nov 5 04:34:29 2016
Total Scan time: 2.300 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]