FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3185, 425 aa 1>>>pF1KE3185 425 - 425 aa - 425 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5298+/-0.00085; mu= 15.7660+/- 0.051 mean_var=64.1982+/-12.736, 0's: 0 Z-trim(105.8): 23 B-trim: 0 in 0/51 Lambda= 0.160071 statistics sampled from 8625 (8642) to 8625 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.64), E-opt: 0.2 (0.265), width: 16 Scan time: 2.260 The best scores are: opt bits E(32554) CCDS7964.1 CLP1 gene_id:10978|Hs108|chr11 ( 425) 2801 655.7 2.4e-188 CCDS44600.1 CLP1 gene_id:10978|Hs108|chr11 ( 361) 1502 355.7 4.3e-98 >>CCDS7964.1 CLP1 gene_id:10978|Hs108|chr11 (425 aa) initn: 2801 init1: 2801 opt: 2801 Z-score: 3494.7 bits: 655.7 E(32554): 2.4e-188 Smith-Waterman score: 2801; 100.0% identity (100.0% similar) in 425 aa overlap (1-425:1-425) 10 20 30 40 50 60 pF1KE3 MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRNKKFTFDAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRNKKFTFDAG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 AKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 AKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR 370 380 390 400 410 420 pF1KE3 FMDLK ::::: CCDS79 FMDLK >>CCDS44600.1 CLP1 gene_id:10978|Hs108|chr11 (361 aa) initn: 2369 init1: 1492 opt: 1502 Z-score: 1874.6 bits: 355.7 E(32554): 4.3e-98 Smith-Waterman score: 2241; 84.9% identity (84.9% similar) in 425 aa overlap (1-425:1-361) 10 20 30 40 50 60 pF1KE3 MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRNKKFTFDAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRNKKFTFDAG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 AKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 AKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI :::::::::::::::::: CCDS44 GPTDVGKSTVCRLLLNYA------------------------------------------ 130 190 200 210 220 230 240 pF1KE3 QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ :::::::::::::::::::::::::::::::::::::: CCDS44 ----------------------ITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ 140 150 160 170 250 260 270 280 290 300 pF1KE3 ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER 180 190 200 210 220 230 310 320 330 340 350 360 pF1KE3 IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD 240 250 260 270 280 290 370 380 390 400 410 420 pF1KE3 MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR 300 310 320 330 340 350 pF1KE3 FMDLK ::::: CCDS44 FMDLK 360 425 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 01:38:56 2016 done: Sun Nov 6 01:38:56 2016 Total Scan time: 2.260 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]