Result of FASTA (omim) for pFN21AE3165
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE3165, 387 aa
  1>>>pF1KE3165 387 - 387 aa - 387 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.9474+/-0.00031; mu= 18.5584+/- 0.020
 mean_var=60.7486+/-12.512, 0's: 0 Z-trim(116.2): 61  B-trim: 44 in 1/52
 Lambda= 0.164553
 statistics sampled from 27126 (27195) to 27126 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.694), E-opt: 0.2 (0.319), width:  16
 Scan time:  8.720

The best scores are:                                      opt bits E(85289)
NP_036308 (OMIM: 609090) F-box only protein 4 isof ( 387) 2639 634.8 1.1e-181
XP_011512328 (OMIM: 609090) PREDICTED: F-box only  ( 341) 2038 492.1 8.5e-139
NP_001284366 (OMIM: 609090) F-box only protein 4 i ( 305) 2027 489.4 4.7e-138
NP_277019 (OMIM: 609090) F-box only protein 4 isof ( 307) 2027 489.4 4.7e-138
XP_011512329 (OMIM: 609090) PREDICTED: F-box only  ( 253) 1661 402.5 5.8e-112
XP_006714533 (OMIM: 609090) PREDICTED: F-box only  ( 243) 1645 398.7 7.8e-111
NP_001180463 (OMIM: 605655) F-box/LRR-repeat prote ( 690)  180 51.2 9.1e-06
XP_011512135 (OMIM: 605655) PREDICTED: F-box/LRR-r ( 619)  175 49.9 1.9e-05
XP_016863508 (OMIM: 605655) PREDICTED: F-box/LRR-r ( 636)  175 49.9 1.9e-05
XP_011512134 (OMIM: 605655) PREDICTED: F-box/LRR-r ( 636)  175 49.9 1.9e-05
XP_011512133 (OMIM: 605655) PREDICTED: F-box/LRR-r ( 655)  175 50.0   2e-05
XP_006714022 (OMIM: 605655) PREDICTED: F-box/LRR-r ( 672)  175 50.0   2e-05
NP_001180464 (OMIM: 605655) F-box/LRR-repeat prote ( 674)  175 50.0   2e-05
NP_036293 (OMIM: 605655) F-box/LRR-repeat protein  ( 691)  175 50.0 2.1e-05
XP_011530390 (OMIM: 606278) PREDICTED: F-box/WD re ( 540)  137 40.9  0.0088
NP_001013433 (OMIM: 606278) F-box/WD repeat-contai ( 589)  137 40.9  0.0094
NP_060785 (OMIM: 606278) F-box/WD repeat-containin ( 627)  137 40.9  0.0099


>>NP_036308 (OMIM: 609090) F-box only protein 4 isoform   (387 aa)
 initn: 2639 init1: 2639 opt: 2639  Z-score: 3383.2  bits: 634.8 E(85289): 1.1e-181
Smith-Waterman score: 2639; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:1-387)

               10        20        30        40        50        60
pF1KE3 MAGSEPRSGTNSPPPPFSDWGRLEAAILSGWKTFWQSVSKERVARTTSREEVDEAASTLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 MAGSEPRSGTNSPPPPFSDWGRLEAAILSGWKTFWQSVSKERVARTTSREEVDEAASTLT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 RLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPSWSSVDWKSLPD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 RLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPSWSSVDWKSLPD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 LEILKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 LEILKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 MFGPGLEELNTSLVLSLMSSEELCPTAGLPQRQIDGIGSGVNFQLNNQHKFNILILYSTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 MFGPGLEELNTSLVLSLMSSEELCPTAGLPQRQIDGIGSGVNFQLNNQHKFNILILYSTT
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE3 RKERDRAREEHTSAVNKMFSRHNEGDDQQGSRYSVIPQIQKVCEVVDGFIYVANAEAHKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 RKERDRAREEHTSAVNKMFSRHNEGDDQQGSRYSVIPQIQKVCEVVDGFIYVANAEAHKR
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE3 HEWQDEFSHIMAMTDPAFGSSGRPLLVLSCISQGDVKRMPCFYLAHELHLNLLNHPWLVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 HEWQDEFSHIMAMTDPAFGSSGRPLLVLSCISQGDVKRMPCFYLAHELHLNLLNHPWLVQ
              310       320       330       340       350       360

              370       380       
pF1KE3 DTEAETLTGFLNGIEWILEEVESKRAR
       :::::::::::::::::::::::::::
NP_036 DTEAETLTGFLNGIEWILEEVESKRAR
              370       380       

>>XP_011512328 (OMIM: 609090) PREDICTED: F-box only prot  (341 aa)
 initn: 2058 init1: 2030 opt: 2038  Z-score: 2612.9  bits: 492.1 E(85289): 8.5e-139
Smith-Waterman score: 2038; 96.2% identity (97.1% similar) in 314 aa overlap (1-308:1-314)

               10        20        30        40        50        60
pF1KE3 MAGSEPRSGTNSPPPPFSDWGRLEAAILSGWKTFWQSVSKERVARTTSREEVDEAASTLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAGSEPRSGTNSPPPPFSDWGRLEAAILSGWKTFWQSVSKERVARTTSREEVDEAASTLT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 RLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPSWSSVDWKSLPD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPSWSSVDWKSLPD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 LEILKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LEILKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 MFGPGLEELNTSLVLSLMSSEELCPTAGLPQRQIDGIGSGVNFQLNNQHKFNILILYSTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MFGPGLEELNTSLVLSLMSSEELCPTAGLPQRQIDGIGSGVNFQLNNQHKFNILILYSTT
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE3 RKERDRAREEHTSAVNKMFSRHNEGDDQQGSRYSVIPQIQKVCEVVDGFIYVANAEAHKR
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
XP_011 RKERDRAREEHTSAVNKMFSRHNEGDDQQGSRYSVIPQIQKVCEVVDGFIYVANAEAHKK
              250       260       270       280       290       300

                    310       320       330       340       350    
pF1KE3 ------HEWQDEFSHIMAMTDPAFGSSGRPLLVLSCISQGDVKRMPCFYLAHELHLNLLN
             : :..  :                                              
XP_011 ASCPEFHSWEEMHSANNYMSLEEETEPQMKPALADSLTAAL                   
              310       320       330       340                    

>>NP_001284366 (OMIM: 609090) F-box only protein 4 isofo  (305 aa)
 initn: 2027 init1: 2027 opt: 2027  Z-score: 2599.5  bits: 489.4 E(85289): 4.7e-138
Smith-Waterman score: 2027; 100.0% identity (100.0% similar) in 299 aa overlap (1-299:1-299)

               10        20        30        40        50        60
pF1KE3 MAGSEPRSGTNSPPPPFSDWGRLEAAILSGWKTFWQSVSKERVARTTSREEVDEAASTLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAGSEPRSGTNSPPPPFSDWGRLEAAILSGWKTFWQSVSKERVARTTSREEVDEAASTLT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 RLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPSWSSVDWKSLPD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPSWSSVDWKSLPD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 LEILKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEILKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 MFGPGLEELNTSLVLSLMSSEELCPTAGLPQRQIDGIGSGVNFQLNNQHKFNILILYSTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MFGPGLEELNTSLVLSLMSSEELCPTAGLPQRQIDGIGSGVNFQLNNQHKFNILILYSTT
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE3 RKERDRAREEHTSAVNKMFSRHNEGDDQQGSRYSVIPQIQKVCEVVDGFIYVANAEAHKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 
NP_001 RKERDRAREEHTSAVNKMFSRHNEGDDQQGSRYSVIPQIQKVCEVVDGFIYVANAEAHKS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE3 HEWQDEFSHIMAMTDPAFGSSGRPLLVLSCISQGDVKRMPCFYLAHELHLNLLNHPWLVQ
                                                                   
NP_001 PGYRG                                                       
                                                                   

>>NP_277019 (OMIM: 609090) F-box only protein 4 isoform   (307 aa)
 initn: 2027 init1: 2027 opt: 2027  Z-score: 2599.4  bits: 489.4 E(85289): 4.7e-138
Smith-Waterman score: 2027; 100.0% identity (100.0% similar) in 299 aa overlap (1-299:1-299)

               10        20        30        40        50        60
pF1KE3 MAGSEPRSGTNSPPPPFSDWGRLEAAILSGWKTFWQSVSKERVARTTSREEVDEAASTLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_277 MAGSEPRSGTNSPPPPFSDWGRLEAAILSGWKTFWQSVSKERVARTTSREEVDEAASTLT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 RLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPSWSSVDWKSLPD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_277 RLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPSWSSVDWKSLPD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 LEILKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_277 LEILKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 MFGPGLEELNTSLVLSLMSSEELCPTAGLPQRQIDGIGSGVNFQLNNQHKFNILILYSTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_277 MFGPGLEELNTSLVLSLMSSEELCPTAGLPQRQIDGIGSGVNFQLNNQHKFNILILYSTT
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE3 RKERDRAREEHTSAVNKMFSRHNEGDDQQGSRYSVIPQIQKVCEVVDGFIYVANAEAHKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 
NP_277 RKERDRAREEHTSAVNKMFSRHNEGDDQQGSRYSVIPQIQKVCEVVDGFIYVANAEAHKS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE3 HEWQDEFSHIMAMTDPAFGSSGRPLLVLSCISQGDVKRMPCFYLAHELHLNLLNHPWLVQ
                                                                   
NP_277 KYSYVHF                                                     
                                                                   

>>XP_011512329 (OMIM: 609090) PREDICTED: F-box only prot  (253 aa)
 initn: 1661 init1: 1661 opt: 1661  Z-score: 2131.1  bits: 402.5 E(85289): 5.8e-112
Smith-Waterman score: 1661; 99.6% identity (100.0% similar) in 246 aa overlap (142-387:8-253)

             120       130       140       150       160       170 
pF1KE3 SVDWKSLPDLEILKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSL
                                     .:::::::::::::::::::::::::::::
XP_011                        MKKLKFRLYRMCCPYTRRASKSSRPMYGAVTSFLHSL
                                      10        20        30       

             180       190       200       210       220       230 
pF1KE3 IIQNEPRFAMFGPGLEELNTSLVLSLMSSEELCPTAGLPQRQIDGIGSGVNFQLNNQHKF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IIQNEPRFAMFGPGLEELNTSLVLSLMSSEELCPTAGLPQRQIDGIGSGVNFQLNNQHKF
        40        50        60        70        80        90       

             240       250       260       270       280       290 
pF1KE3 NILILYSTTRKERDRAREEHTSAVNKMFSRHNEGDDQQGSRYSVIPQIQKVCEVVDGFIY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NILILYSTTRKERDRAREEHTSAVNKMFSRHNEGDDQQGSRYSVIPQIQKVCEVVDGFIY
       100       110       120       130       140       150       

             300       310       320       330       340       350 
pF1KE3 VANAEAHKRHEWQDEFSHIMAMTDPAFGSSGRPLLVLSCISQGDVKRMPCFYLAHELHLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VANAEAHKRHEWQDEFSHIMAMTDPAFGSSGRPLLVLSCISQGDVKRMPCFYLAHELHLN
       160       170       180       190       200       210       

             360       370       380       
pF1KE3 LLNHPWLVQDTEAETLTGFLNGIEWILEEVESKRAR
       ::::::::::::::::::::::::::::::::::::
XP_011 LLNHPWLVQDTEAETLTGFLNGIEWILEEVESKRAR
       220       230       240       250   

>>XP_006714533 (OMIM: 609090) PREDICTED: F-box only prot  (243 aa)
 initn: 1645 init1: 1645 opt: 1645  Z-score: 2110.8  bits: 398.7 E(85289): 7.8e-111
Smith-Waterman score: 1645; 100.0% identity (100.0% similar) in 243 aa overlap (145-387:1-243)

          120       130       140       150       160       170    
pF1KE3 WKSLPDLEILKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQ
                                     ::::::::::::::::::::::::::::::
XP_006                               MCCPYTRRASKSSRPMYGAVTSFLHSLIIQ
                                             10        20        30

          180       190       200       210       220       230    
pF1KE3 NEPRFAMFGPGLEELNTSLVLSLMSSEELCPTAGLPQRQIDGIGSGVNFQLNNQHKFNIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NEPRFAMFGPGLEELNTSLVLSLMSSEELCPTAGLPQRQIDGIGSGVNFQLNNQHKFNIL
               40        50        60        70        80        90

          240       250       260       270       280       290    
pF1KE3 ILYSTTRKERDRAREEHTSAVNKMFSRHNEGDDQQGSRYSVIPQIQKVCEVVDGFIYVAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ILYSTTRKERDRAREEHTSAVNKMFSRHNEGDDQQGSRYSVIPQIQKVCEVVDGFIYVAN
              100       110       120       130       140       150

          300       310       320       330       340       350    
pF1KE3 AEAHKRHEWQDEFSHIMAMTDPAFGSSGRPLLVLSCISQGDVKRMPCFYLAHELHLNLLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AEAHKRHEWQDEFSHIMAMTDPAFGSSGRPLLVLSCISQGDVKRMPCFYLAHELHLNLLN
              160       170       180       190       200       210

          360       370       380       
pF1KE3 HPWLVQDTEAETLTGFLNGIEWILEEVESKRAR
       :::::::::::::::::::::::::::::::::
XP_006 HPWLVQDTEAETLTGFLNGIEWILEEVESKRAR
              220       230       240   

>>NP_001180463 (OMIM: 605655) F-box/LRR-repeat protein 5  (690 aa)
 initn: 167 init1: 134 opt: 180  Z-score: 224.6  bits: 51.2 E(85289): 9.1e-06
Smith-Waterman score: 180; 30.2% identity (64.6% similar) in 96 aa overlap (36-130:181-272)

          10        20        30        40        50        60     
pF1KE3 PRSGTNSPPPPFSDWGRLEAAILSGWKTFWQSVSKERVARTTSREEVDEAASTLTRLPID
                                     :.  :  : . ... ::.: .. .:.:: .
NP_001 KKKVIAQHCSQKDTAELLRGLSLWNHAEERQKFFKYSVDEKSDKAEVSEHSTGITHLPPE
              160       170       180       190       200       210

          70        80        90       100        110       120    
pF1KE3 VQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLP-SWSSVDWKSLPDLEIL
       :.: :.:.:.:..::. ....  :.. ..   ::...     :  :.  :: : :  :. 
NP_001 VMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLWKHL----YPVHWARGDWYSGPATELD
              220       230       240           250       260      

          130       140       150       160       170       180    
pF1KE3 KKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFAMFGP
        .: .:                                                      
NP_001 TEPDDEWVKNRKDESRAFHEWDEDADIDESEESAEESIAISIAQMEKRLLHGLIHNVLPY
        270       280       290       300       310       320      

>>XP_011512135 (OMIM: 605655) PREDICTED: F-box/LRR-repea  (619 aa)
 initn: 167 init1: 134 opt: 175  Z-score: 218.8  bits: 49.9 E(85289): 1.9e-05
Smith-Waterman score: 175; 30.9% identity (64.9% similar) in 97 aa overlap (36-130:109-201)

          10        20        30        40        50         60    
pF1KE3 PRSGTNSPPPPFSDWGRLEAAILSGWKTFWQSVSKERVARTTSRE-EVDEAASTLTRLPI
                                     :.  :  : . ...: ::.: .. .:.:: 
XP_011 KKKVIAQHCSQKDTAELLRGLSLWNHAEERQKFFKYSVDEKSDKEAEVSEHSTGITHLPP
       80        90       100       110       120       130        

           70        80        90       100        110       120   
pF1KE3 DVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLP-SWSSVDWKSLPDLEI
       .:.: :.:.:.:..::. ....  :.. ..   ::...     :  :.  :: : :  :.
XP_011 EVMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLWKHL----YPVHWARGDWYSGPATEL
      140       150       160       170           180       190    

           130       140       150       160       170       180   
pF1KE3 LKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFAMFG
         .: .:                                                     
XP_011 DTEPDDEWVKNRKDESRAFHEWDEDADIDESEESAEESIAISIAQMEKRLLHGLIHNVLP
          200       210       220       230       240       250    

>>XP_016863508 (OMIM: 605655) PREDICTED: F-box/LRR-repea  (636 aa)
 initn: 167 init1: 134 opt: 175  Z-score: 218.7  bits: 49.9 E(85289): 1.9e-05
Smith-Waterman score: 175; 30.9% identity (64.9% similar) in 97 aa overlap (36-130:126-218)

          10        20        30        40        50         60    
pF1KE3 PRSGTNSPPPPFSDWGRLEAAILSGWKTFWQSVSKERVARTTSRE-EVDEAASTLTRLPI
                                     :.  :  : . ...: ::.: .. .:.:: 
XP_016 KKKVIAQHCSQKDTAELLRGLSLWNHAEERQKFFKYSVDEKSDKEAEVSEHSTGITHLPP
         100       110       120       130       140       150     

           70        80        90       100        110       120   
pF1KE3 DVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLP-SWSSVDWKSLPDLEI
       .:.: :.:.:.:..::. ....  :.. ..   ::...     :  :.  :: : :  :.
XP_016 EVMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLWKHL----YPVHWARGDWYSGPATEL
         160       170       180       190           200       210 

           130       140       150       160       170       180   
pF1KE3 LKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFAMFG
         .: .:                                                     
XP_016 DTEPDDEWVKNRKDESRAFHEWDEDADIDESEESAEESIAISIAQMEKRLLHGLIHNVLP
             220       230       240       250       260       270 

>>XP_011512134 (OMIM: 605655) PREDICTED: F-box/LRR-repea  (636 aa)
 initn: 167 init1: 134 opt: 175  Z-score: 218.7  bits: 49.9 E(85289): 1.9e-05
Smith-Waterman score: 175; 30.9% identity (64.9% similar) in 97 aa overlap (36-130:126-218)

          10        20        30        40        50         60    
pF1KE3 PRSGTNSPPPPFSDWGRLEAAILSGWKTFWQSVSKERVARTTSRE-EVDEAASTLTRLPI
                                     :.  :  : . ...: ::.: .. .:.:: 
XP_011 KKKVIAQHCSQKDTAELLRGLSLWNHAEERQKFFKYSVDEKSDKEAEVSEHSTGITHLPP
         100       110       120       130       140       150     

           70        80        90       100        110       120   
pF1KE3 DVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLP-SWSSVDWKSLPDLEI
       .:.: :.:.:.:..::. ....  :.. ..   ::...     :  :.  :: : :  :.
XP_011 EVMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLWKHL----YPVHWARGDWYSGPATEL
         160       170       180       190           200       210 

           130       140       150       160       170       180   
pF1KE3 LKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFAMFG
         .: .:                                                     
XP_011 DTEPDDEWVKNRKDESRAFHEWDEDADIDESEESAEESIAISIAQMEKRLLHGLIHNVLP
             220       230       240       250       260       270 




387 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 03:26:51 2016 done: Sun Nov  6 03:26:53 2016
 Total Scan time:  8.720 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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