Result of FASTA (omim) for pFN21AE2149
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE2149, 607 aa
  1>>>pF1KE2149 607 - 607 aa - 607 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 14.5230+/-0.000438; mu= -23.5361+/- 0.027
 mean_var=569.6749+/-118.454, 0's: 0 Z-trim(124.7): 106  B-trim: 1501 in 1/60
 Lambda= 0.053735
 statistics sampled from 46870 (47002) to 46870 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.812), E-opt: 0.2 (0.551), width:  16
 Scan time: 13.290

The best scores are:                                      opt bits E(85289)
NP_004747 (OMIM: 604018) numb-like protein isoform ( 609) 4203 340.6 9.1e-93
NP_001276908 (OMIM: 604018) numb-like protein isof ( 568) 3896 316.8 1.3e-85
NP_001276909 (OMIM: 604018) numb-like protein isof ( 568) 3896 316.8 1.3e-85
NP_001005745 (OMIM: 603728) protein numb homolog i ( 592) 1820 155.9 3.7e-37
NP_003735 (OMIM: 603728) protein numb homolog isof ( 640) 1660 143.5 2.1e-33
NP_001005744 (OMIM: 603728) protein numb homolog i ( 603) 1423 125.1 6.8e-28
NP_001307043 (OMIM: 603728) protein numb homolog i ( 603) 1423 125.1 6.8e-28
NP_001005743 (OMIM: 603728) protein numb homolog i ( 651) 1263 112.7 3.9e-24


>>NP_004747 (OMIM: 604018) numb-like protein isoform a [  (609 aa)
 initn: 3057 init1: 3057 opt: 4203  Z-score: 1786.4  bits: 340.6 E(85289): 9.1e-93
Smith-Waterman score: 4203; 99.7% identity (99.7% similar) in 609 aa overlap (1-607:1-609)

               10        20        30        40        50        60
pF1KE2 MSRSAAASGGPRRPERHLPPAPCGAPGPPETCRTEPDGAGTMNKLRQSLRRRKPAYVPEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MSRSAAASGGPRRPERHLPPAPCGAPGPPETCRTEPDGAGTMNKLRQSLRRRKPAYVPEA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 SRPHQWQADEDAVRKGTCSFPVRYLGHVEVEESRGMHVCEDAVKKLKAMGRKSVKSVLWV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 SRPHQWQADEDAVRKGTCSFPVRYLGHVEVEESRGMHVCEDAVKKLKAMGRKSVKSVLWV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 SADGLRVVDDKTKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALKDS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 SADGLRVVDDKTKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALKDS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 GERLSHAVGCAFAACLERKQRREKECGVTAAFDASRTSFAREGSFRLSGGGRPAEREAPD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 GERLSHAVGCAFAACLERKQRREKECGVTAAFDASRTSFAREGSFRLSGGGRPAEREAPD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 KKKAEAAAAPTVAPGPAQPGHVSPTPATTSPGEKGEAGTPVAAGTTAAAIPRRHAPLEQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KKKAEAAAAPTVAPGPAQPGHVSPTPATTSPGEKGEAGTPVAAGTTAAAIPRRHAPLEQL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE2 VRQGSFRGFPALSQKNSPFKRQLSLRLNELPSTLQRRTDFQVKGTVPEMEPPGAGDSDSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 VRQGSFRGFPALSQKNSPFKRQLSLRLNELPSTLQRRTDFQVKGTVPEMEPPGAGDSDSI
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE2 NALCTQISSSFASAGAPAPGPPPATTGTSAWGEPSVPPAAAFQPGHKRTPSEAERWLEEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 NALCTQISSSFASAGAPAPGPPPATTGTSAWGEPSVPPAAAFQPGHKRTPSEAERWLEEV
              370       380       390       400       410       420

              430       440         450       460       470        
pF1KE2 SQVAKAQQQQQQQQQQQQQQQQQQ--AASVAPVPTMPPALQPFPAPVGPFDAAPAQVAVF
       ::::::::::::::::::::::::  ::::::::::::::::::::::::::::::::::
NP_004 SQVAKAQQQQQQQQQQQQQQQQQQQQAASVAPVPTMPPALQPFPAPVGPFDAAPAQVAVF
              430       440       450       460       470       480

      480       490       500       510       520       530        
pF1KE2 LPPPHMQPPFVPAYPGLGYPPMPRVPVVGITPSQMVANAFCSAAQLQPQPATLLGKAGAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LPPPHMQPPFVPAYPGLGYPPMPRVPVVGITPSQMVANAFCSAAQLQPQPATLLGKAGAF
              490       500       510       520       530       540

      540       550       560       570       580       590        
pF1KE2 PPPAIPSAPGSQARPRPNGAPWPPEPAPAPAPELDPFEAQWAALEGKATVEKPSNPFSGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 PPPAIPSAPGSQARPRPNGAPWPPEPAPAPAPELDPFEAQWAALEGKATVEKPSNPFSGD
              550       560       570       580       590       600

      600       
pF1KE2 LQKTFEIEL
       :::::::::
NP_004 LQKTFEIEL
                

>>NP_001276908 (OMIM: 604018) numb-like protein isoform   (568 aa)
 initn: 2750 init1: 2750 opt: 3896  Z-score: 1658.2  bits: 316.8 E(85289): 1.3e-85
Smith-Waterman score: 3896; 99.6% identity (99.6% similar) in 568 aa overlap (42-607:1-568)

              20        30        40        50        60        70 
pF1KE2 RRPERHLPPAPCGAPGPPETCRTEPDGAGTMNKLRQSLRRRKPAYVPEASRPHQWQADED
                                     ::::::::::::::::::::::::::::::
NP_001                               MNKLRQSLRRRKPAYVPEASRPHQWQADED
                                             10        20        30

              80        90       100       110       120       130 
pF1KE2 AVRKGTCSFPVRYLGHVEVEESRGMHVCEDAVKKLKAMGRKSVKSVLWVSADGLRVVDDK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVRKGTCSFPVRYLGHVEVEESRGMHVCEDAVKKLKAMGRKSVKSVLWVSADGLRVVDDK
               40        50        60        70        80        90

             140       150       160       170       180       190 
pF1KE2 TKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALKDSGERLSHAVGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALKDSGERLSHAVGCA
              100       110       120       130       140       150

             200       210       220       230       240       250 
pF1KE2 FAACLERKQRREKECGVTAAFDASRTSFAREGSFRLSGGGRPAEREAPDKKKAEAAAAPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FAACLERKQRREKECGVTAAFDASRTSFAREGSFRLSGGGRPAEREAPDKKKAEAAAAPT
              160       170       180       190       200       210

             260       270       280       290       300       310 
pF1KE2 VAPGPAQPGHVSPTPATTSPGEKGEAGTPVAAGTTAAAIPRRHAPLEQLVRQGSFRGFPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VAPGPAQPGHVSPTPATTSPGEKGEAGTPVAAGTTAAAIPRRHAPLEQLVRQGSFRGFPA
              220       230       240       250       260       270

             320       330       340       350       360       370 
pF1KE2 LSQKNSPFKRQLSLRLNELPSTLQRRTDFQVKGTVPEMEPPGAGDSDSINALCTQISSSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSQKNSPFKRQLSLRLNELPSTLQRRTDFQVKGTVPEMEPPGAGDSDSINALCTQISSSF
              280       290       300       310       320       330

             380       390       400       410       420       430 
pF1KE2 ASAGAPAPGPPPATTGTSAWGEPSVPPAAAFQPGHKRTPSEAERWLEEVSQVAKAQQQQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASAGAPAPGPPPATTGTSAWGEPSVPPAAAFQPGHKRTPSEAERWLEEVSQVAKAQQQQQ
              340       350       360       370       380       390

             440         450       460       470       480         
pF1KE2 QQQQQQQQQQQQQ--AASVAPVPTMPPALQPFPAPVGPFDAAPAQVAVFLPPPHMQPPFV
       :::::::::::::  :::::::::::::::::::::::::::::::::::::::::::::
NP_001 QQQQQQQQQQQQQQQAASVAPVPTMPPALQPFPAPVGPFDAAPAQVAVFLPPPHMQPPFV
              400       410       420       430       440       450

     490       500       510       520       530       540         
pF1KE2 PAYPGLGYPPMPRVPVVGITPSQMVANAFCSAAQLQPQPATLLGKAGAFPPPAIPSAPGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAYPGLGYPPMPRVPVVGITPSQMVANAFCSAAQLQPQPATLLGKAGAFPPPAIPSAPGS
              460       470       480       490       500       510

     550       560       570       580       590       600       
pF1KE2 QARPRPNGAPWPPEPAPAPAPELDPFEAQWAALEGKATVEKPSNPFSGDLQKTFEIEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QARPRPNGAPWPPEPAPAPAPELDPFEAQWAALEGKATVEKPSNPFSGDLQKTFEIEL
              520       530       540       550       560        

>>NP_001276909 (OMIM: 604018) numb-like protein isoform   (568 aa)
 initn: 2750 init1: 2750 opt: 3896  Z-score: 1658.2  bits: 316.8 E(85289): 1.3e-85
Smith-Waterman score: 3896; 99.6% identity (99.6% similar) in 568 aa overlap (42-607:1-568)

              20        30        40        50        60        70 
pF1KE2 RRPERHLPPAPCGAPGPPETCRTEPDGAGTMNKLRQSLRRRKPAYVPEASRPHQWQADED
                                     ::::::::::::::::::::::::::::::
NP_001                               MNKLRQSLRRRKPAYVPEASRPHQWQADED
                                             10        20        30

              80        90       100       110       120       130 
pF1KE2 AVRKGTCSFPVRYLGHVEVEESRGMHVCEDAVKKLKAMGRKSVKSVLWVSADGLRVVDDK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVRKGTCSFPVRYLGHVEVEESRGMHVCEDAVKKLKAMGRKSVKSVLWVSADGLRVVDDK
               40        50        60        70        80        90

             140       150       160       170       180       190 
pF1KE2 TKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALKDSGERLSHAVGCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALKDSGERLSHAVGCA
              100       110       120       130       140       150

             200       210       220       230       240       250 
pF1KE2 FAACLERKQRREKECGVTAAFDASRTSFAREGSFRLSGGGRPAEREAPDKKKAEAAAAPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FAACLERKQRREKECGVTAAFDASRTSFAREGSFRLSGGGRPAEREAPDKKKAEAAAAPT
              160       170       180       190       200       210

             260       270       280       290       300       310 
pF1KE2 VAPGPAQPGHVSPTPATTSPGEKGEAGTPVAAGTTAAAIPRRHAPLEQLVRQGSFRGFPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VAPGPAQPGHVSPTPATTSPGEKGEAGTPVAAGTTAAAIPRRHAPLEQLVRQGSFRGFPA
              220       230       240       250       260       270

             320       330       340       350       360       370 
pF1KE2 LSQKNSPFKRQLSLRLNELPSTLQRRTDFQVKGTVPEMEPPGAGDSDSINALCTQISSSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSQKNSPFKRQLSLRLNELPSTLQRRTDFQVKGTVPEMEPPGAGDSDSINALCTQISSSF
              280       290       300       310       320       330

             380       390       400       410       420       430 
pF1KE2 ASAGAPAPGPPPATTGTSAWGEPSVPPAAAFQPGHKRTPSEAERWLEEVSQVAKAQQQQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASAGAPAPGPPPATTGTSAWGEPSVPPAAAFQPGHKRTPSEAERWLEEVSQVAKAQQQQQ
              340       350       360       370       380       390

             440         450       460       470       480         
pF1KE2 QQQQQQQQQQQQQ--AASVAPVPTMPPALQPFPAPVGPFDAAPAQVAVFLPPPHMQPPFV
       :::::::::::::  :::::::::::::::::::::::::::::::::::::::::::::
NP_001 QQQQQQQQQQQQQQQAASVAPVPTMPPALQPFPAPVGPFDAAPAQVAVFLPPPHMQPPFV
              400       410       420       430       440       450

     490       500       510       520       530       540         
pF1KE2 PAYPGLGYPPMPRVPVVGITPSQMVANAFCSAAQLQPQPATLLGKAGAFPPPAIPSAPGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAYPGLGYPPMPRVPVVGITPSQMVANAFCSAAQLQPQPATLLGKAGAFPPPAIPSAPGS
              460       470       480       490       500       510

     550       560       570       580       590       600       
pF1KE2 QARPRPNGAPWPPEPAPAPAPELDPFEAQWAALEGKATVEKPSNPFSGDLQKTFEIEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QARPRPNGAPWPPEPAPAPAPELDPFEAQWAALEGKATVEKPSNPFSGDLQKTFEIEL
              520       530       540       550       560        

>>NP_001005745 (OMIM: 603728) protein numb homolog isofo  (592 aa)
 initn: 1943 init1: 1174 opt: 1820  Z-score: 788.2  bits: 155.9 E(85289): 3.7e-37
Smith-Waterman score: 2068; 56.9% identity (72.4% similar) in 624 aa overlap (42-607:1-592)

              20        30        40        50        60        70 
pF1KE2 RRPERHLPPAPCGAPGPPETCRTEPDGAGTMNKLRQSLRRRKPAYVPEASRPHQWQADED
                                     :::::::.::.: .::::::::::::.::.
NP_001                               MNKLRQSFRRKKDVYVPEASRPHQWQTDEE
                                             10        20        30

              80        90       100       110       120       130 
pF1KE2 AVRKGTCSFPVRYLGHVEVEESRGMHVCEDAVKKLKAMGRKSVKSVLWVSADGLRVVDDK
       .:: : :::::.:::::::.::::::.::::::.::: :.:.::.:::::::::::::.:
NP_001 GVRTGKCSFPVKYLGHVEVDESRGMHICEDAVKRLKATGKKAVKAVLWVSADGLRVVDEK
               40        50        60        70        80        90

             140       150       160       170       180       190 
pF1KE2 TKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALKDSGERLSHAVGCA
       ::::.::::::::::::::::.:.:::::::::::::::::::.:.::.:::::::::::
NP_001 TKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTRRWICHCFMAVKDTGERLSHAVGCA
              100       110       120       130       140       150

             200       210       220       230            240      
pF1KE2 FAACLERKQRREKECGVTAAFDASRTSFAREGSFRLSGGGRPAEREA-----PDKKKAEA
       :::::::::.:::::::::.::::::.:.::::::.. . . ::::       : ::::.
NP_001 FAACLERKQKREKECGVTATFDASRTTFTREGSFRVTTATEQAEREEIMKQMQDAKKAET
              160       170       180       190       200       210

           250       260       270       280       290       300   
pF1KE2 ---AAAPTVAPGPAQPGHVSPTPATTSPGEKGEAGTPVAAGTTAAAIPRRHAPLEQLVRQ
          ... .:::: . :.  :::  :..   . : ..:        ::::::::.:::.::
NP_001 DKIVVGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNP-------HAIPRRHAPIEQLARQ
              220       230       240              250       260   

           310       320       330       340       350       360   
pF1KE2 GSFRGFPALSQKNSPFKRQLSLRLNELPSTLQRRTDFQVKGTVPEMEPPGAGDSDSINAL
       :::::::::::: ::::::::::.::::::.::.::: .:..:::.:    :...::..:
NP_001 GSFRGFPALSQKMSPFKRQLSLRINELPSTMQRKTDFPIKNAVPEVE----GEAESISSL
           270       280       290       300       310             

           370          380                390        400       410
pF1KE2 CTQISSSFASAGAP---APGPPPATT---------GTSAWGEPS-VPPAAAFQPGHKRTP
       :.::...:..   :   ::   :.:.         ::  ::. : .   . :: ::.:::
NP_001 CSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQGTE-WGQSSGAASPGLFQAGHRRTP
     320       330       340       350        360       370        

              420       430       440       450       460       470
pF1KE2 SEAERWLEEVSQVAKAQQQQQQQQQQQQQQQQQQAASVAPVPTMPPALQPFPAPVGPFDA
       :::.:::::::. ..::: :               ::.::   . :.::: :  .    :
NP_001 SEADRWLEEVSKSVRAQQPQ---------------ASAAP---LQPVLQPPPPTAISQPA
      380       390                      400          410       420

                 480            490           500       510        
pF1KE2 APAQVAVFL---P-P----PHMQPPFVPA--YP-GLGYP-PMPRVPVVGITPSQMVANAF
       .: :  .::   : :    : .:: ::::  :: . :.: : : ::::::::::::::.:
NP_001 SPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVF
              430       440       450       460       470       480

      520          530                     540       550           
pF1KE2 CSAAQLQ---PQPATLLGKAGAFP--------------PPAIPSAPGSQA-----RPRPN
        .:.. :   :. .  : .  .::              :::     :: :       :  
NP_001 GTAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPA-QHLNGSAAFNGVDDGRLA
              490       500       510       520        530         

        560       570       580          590       600       
pF1KE2 GAPWPPEPAPAPAPELDPFEAQWAALEGKA---TVEKPSNPFSGDLQKTFEIEL
       .:    : .:. .  .:::::::::::.:.   :  .:.::::.::::::::::
NP_001 SADRHTE-VPTGTCPVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL
     540        550       560       570       580       590  

>>NP_003735 (OMIM: 603728) protein numb homolog isoform   (640 aa)
 initn: 1943 init1: 1174 opt: 1660  Z-score: 720.7  bits: 143.5 E(85289): 2.1e-33
Smith-Waterman score: 1850; 54.3% identity (69.4% similar) in 591 aa overlap (42-549:1-562)

              20        30        40        50        60        70 
pF1KE2 RRPERHLPPAPCGAPGPPETCRTEPDGAGTMNKLRQSLRRRKPAYVPEASRPHQWQADED
                                     :::::::.::.: .::::::::::::.::.
NP_003                               MNKLRQSFRRKKDVYVPEASRPHQWQTDEE
                                             10        20        30

              80        90       100       110       120       130 
pF1KE2 AVRKGTCSFPVRYLGHVEVEESRGMHVCEDAVKKLKAMGRKSVKSVLWVSADGLRVVDDK
       .:: : :::::.:::::::.::::::.::::::.::: :.:.::.:::::::::::::.:
NP_003 GVRTGKCSFPVKYLGHVEVDESRGMHICEDAVKRLKATGKKAVKAVLWVSADGLRVVDEK
               40        50        60        70        80        90

             140       150       160       170       180       190 
pF1KE2 TKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALKDSGERLSHAVGCA
       ::::.::::::::::::::::.:.:::::::::::::::::::.:.::.:::::::::::
NP_003 TKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTRRWICHCFMAVKDTGERLSHAVGCA
              100       110       120       130       140       150

             200       210       220       230            240      
pF1KE2 FAACLERKQRREKECGVTAAFDASRTSFAREGSFRLSGGGRPAEREA-----PDKKKAEA
       :::::::::.:::::::::.::::::.:.::::::.. . . ::::       : ::::.
NP_003 FAACLERKQKREKECGVTATFDASRTTFTREGSFRVTTATEQAEREEIMKQMQDAKKAET
              160       170       180       190       200       210

           250       260       270       280       290       300   
pF1KE2 ---AAAPTVAPGPAQPGHVSPTPATTSPGEKGEAGTPVAAGTTAAAIPRRHAPLEQLVRQ
          ... .:::: . :.  :::  :..   . : ..:        ::::::::.:::.::
NP_003 DKIVVGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNP-------HAIPRRHAPIEQLARQ
              220       230       240              250       260   

           310       320       330       340       350       360   
pF1KE2 GSFRGFPALSQKNSPFKRQLSLRLNELPSTLQRRTDFQVKGTVPEMEPPGAGDSDSINAL
       :::::::::::: ::::::::::.::::::.::.::: .:..:::.:    :...::..:
NP_003 GSFRGFPALSQKMSPFKRQLSLRINELPSTMQRKTDFPIKNAVPEVE----GEAESISSL
           270       280       290       300       310             

           370                    380                              
pF1KE2 CTQISSSFAS-----AGAP--------APGPP----------------PATTGT------
       :.::...:..     ..::        ::  :                :: :.       
NP_003 CSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQANGTDSAFHVLAKPAHTALAPVAMP
     320       330       340       350       360       370         

                              390        400       410       420   
pF1KE2 ------------------------SAWGEPS-VPPAAAFQPGHKRTPSEAERWLEEVSQV
                               . ::. : .   . :: ::.::::::.:::::::. 
NP_003 VRETNPWAHAPDAANKEIAATCSGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKS
     380       390       400       410       420       430         

           430       440       450       460       470          480
pF1KE2 AKAQQQQQQQQQQQQQQQQQQAASVAPVPTMPPALQPFPAPVGPFDAAPAQVAVFL---P
       ..::: :               ::.::   . :.::: :  .    :.: :  .::   :
NP_003 VRAQQPQ---------------ASAAP---LQPVLQPPPPTAISQPASPFQGNAFLTSQP
     440                      450          460       470       480 

                   490           500       510       520           
pF1KE2 -P----PHMQPPFVPA--YP-GLGYP-PMPRVPVVGITPSQMVANAFCSAAQLQ---PQP
        :    : .:: ::::  :: . :.: : : ::::::::::::::.: .:.. :   :. 
NP_003 VPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPHQ
             490       500       510       520       530       540 

      530       540       550       560       570       580        
pF1KE2 ATLLGKAGAFPPPAIPSAPGSQARPRPNGAPWPPEPAPAPAPELDPFEAQWAALEGKATV
       .  : .  .::     ::  :                                       
NP_003 SPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASADRHTEVPTGTCP
             550       560       570       580       590       600 

>>NP_001005744 (OMIM: 603728) protein numb homolog isofo  (603 aa)
 initn: 1930 init1: 777 opt: 1423  Z-score: 621.8  bits: 125.1 E(85289): 6.8e-28
Smith-Waterman score: 2036; 55.9% identity (71.2% similar) in 635 aa overlap (42-607:1-603)

              20        30        40        50        60        70 
pF1KE2 RRPERHLPPAPCGAPGPPETCRTEPDGAGTMNKLRQSLRRRKPAYVPEASRPHQWQADED
                                     :::::::.::.: .::::::::::::.::.
NP_001                               MNKLRQSFRRKKDVYVPEASRPHQWQTDEE
                                             10        20        30

              80        90       100                  110       120
pF1KE2 AVRKGTCSFPVRYLGHVEVEESRGMHVCEDAVKKLKA-----------MGRKSVKSVLWV
       .:: : :::::.:::::::.::::::.::::::.:::            :.:.::.::::
NP_001 GVRTGKCSFPVKYLGHVEVDESRGMHICEDAVKRLKAERKFFKGFFGKTGKKAVKAVLWV
               40        50        60        70        80        90

              130       140       150       160       170       180
pF1KE2 SADGLRVVDDKTKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALKDS
       :::::::::.:::::.::::::::::::::::.:.:::::::::::::::::::.:.::.
NP_001 SADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTRRWICHCFMAVKDT
              100       110       120       130       140       150

              190       200       210       220       230          
pF1KE2 GERLSHAVGCAFAACLERKQRREKECGVTAAFDASRTSFAREGSFRLSGGGRPAEREA--
       ::::::::::::::::::::.:::::::::.::::::.:.::::::.. . . ::::   
NP_001 GERLSHAVGCAFAACLERKQKREKECGVTATFDASRTTFTREGSFRVTTATEQAEREEIM
              160       170       180       190       200       210

         240          250       260       270       280       290  
pF1KE2 ---PDKKKAEA---AAAPTVAPGPAQPGHVSPTPATTSPGEKGEAGTPVAAGTTAAAIPR
           : ::::.   ... .:::: . :.  :::  :..   . : ..:        ::::
NP_001 KQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNP-------HAIPR
              220       230       240       250              260   

            300       310       320       330       340       350  
pF1KE2 RHAPLEQLVRQGSFRGFPALSQKNSPFKRQLSLRLNELPSTLQRRTDFQVKGTVPEMEPP
       ::::.:::.:::::::::::::: ::::::::::.::::::.::.::: .:..:::.:  
NP_001 RHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINELPSTMQRKTDFPIKNAVPEVE--
           270       280       290       300       310       320   

            360       370          380                390          
pF1KE2 GAGDSDSINALCTQISSSFASAGAP---APGPPPATT---------GTSAWGEPS-VPPA
         :...::..::.::...:..   :   ::   :.:.         ::  ::. : .   
NP_001 --GEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQGTE-WGQSSGAASP
               330       340       350       360        370        

     400       410       420       430       440       450         
pF1KE2 AAFQPGHKRTPSEAERWLEEVSQVAKAQQQQQQQQQQQQQQQQQQAASVAPVPTMPPALQ
       . :: ::.::::::.:::::::. ..::: :               ::.::   . :.::
NP_001 GLFQAGHRRTPSEADRWLEEVSKSVRAQQPQ---------------ASAAP---LQPVLQ
      380       390       400                      410          420

     460       470          480            490           500       
pF1KE2 PFPAPVGPFDAAPAQVAVFL---P-P----PHMQPPFVPA--YP-GLGYP-PMPRVPVVG
       : :  .    :.: :  .::   : :    : .:: ::::  :: . :.: : : :::::
NP_001 PPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVG
              430       440       450       460       470       480

       510       520          530                     540       550
pF1KE2 ITPSQMVANAFCSAAQLQ---PQPATLLGKAGAFP--------------PPAIPSAPGSQ
       :::::::::.: .:.. :   :. .  : .  .::              :::     :: 
NP_001 ITPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPA-QHLNGSA
              490       500       510       520       530          

                   560       570       580          590       600  
pF1KE2 A-----RPRPNGAPWPPEPAPAPAPELDPFEAQWAALEGKA---TVEKPSNPFSGDLQKT
       :       :  .:    : .:. .  .:::::::::::.:.   :  .:.::::.:::::
NP_001 AFNGVDDGRLASADRHTE-VPTGTCPVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKT
     540       550        560       570       580       590        

            
pF1KE2 FEIEL
       :::::
NP_001 FEIEL
      600   

>>NP_001307043 (OMIM: 603728) protein numb homolog isofo  (603 aa)
 initn: 1930 init1: 777 opt: 1423  Z-score: 621.8  bits: 125.1 E(85289): 6.8e-28
Smith-Waterman score: 2036; 55.9% identity (71.2% similar) in 635 aa overlap (42-607:1-603)

              20        30        40        50        60        70 
pF1KE2 RRPERHLPPAPCGAPGPPETCRTEPDGAGTMNKLRQSLRRRKPAYVPEASRPHQWQADED
                                     :::::::.::.: .::::::::::::.::.
NP_001                               MNKLRQSFRRKKDVYVPEASRPHQWQTDEE
                                             10        20        30

              80        90       100                  110       120
pF1KE2 AVRKGTCSFPVRYLGHVEVEESRGMHVCEDAVKKLKA-----------MGRKSVKSVLWV
       .:: : :::::.:::::::.::::::.::::::.:::            :.:.::.::::
NP_001 GVRTGKCSFPVKYLGHVEVDESRGMHICEDAVKRLKAERKFFKGFFGKTGKKAVKAVLWV
               40        50        60        70        80        90

              130       140       150       160       170       180
pF1KE2 SADGLRVVDDKTKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALKDS
       :::::::::.:::::.::::::::::::::::.:.:::::::::::::::::::.:.::.
NP_001 SADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTRRWICHCFMAVKDT
              100       110       120       130       140       150

              190       200       210       220       230          
pF1KE2 GERLSHAVGCAFAACLERKQRREKECGVTAAFDASRTSFAREGSFRLSGGGRPAEREA--
       ::::::::::::::::::::.:::::::::.::::::.:.::::::.. . . ::::   
NP_001 GERLSHAVGCAFAACLERKQKREKECGVTATFDASRTTFTREGSFRVTTATEQAEREEIM
              160       170       180       190       200       210

         240          250       260       270       280       290  
pF1KE2 ---PDKKKAEA---AAAPTVAPGPAQPGHVSPTPATTSPGEKGEAGTPVAAGTTAAAIPR
           : ::::.   ... .:::: . :.  :::  :..   . : ..:        ::::
NP_001 KQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNP-------HAIPR
              220       230       240       250              260   

            300       310       320       330       340       350  
pF1KE2 RHAPLEQLVRQGSFRGFPALSQKNSPFKRQLSLRLNELPSTLQRRTDFQVKGTVPEMEPP
       ::::.:::.:::::::::::::: ::::::::::.::::::.::.::: .:..:::.:  
NP_001 RHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINELPSTMQRKTDFPIKNAVPEVE--
           270       280       290       300       310       320   

            360       370          380                390          
pF1KE2 GAGDSDSINALCTQISSSFASAGAP---APGPPPATT---------GTSAWGEPS-VPPA
         :...::..::.::...:..   :   ::   :.:.         ::  ::. : .   
NP_001 --GEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQGTE-WGQSSGAASP
               330       340       350       360        370        

     400       410       420       430       440       450         
pF1KE2 AAFQPGHKRTPSEAERWLEEVSQVAKAQQQQQQQQQQQQQQQQQQAASVAPVPTMPPALQ
       . :: ::.::::::.:::::::. ..::: :               ::.::   . :.::
NP_001 GLFQAGHRRTPSEADRWLEEVSKSVRAQQPQ---------------ASAAP---LQPVLQ
      380       390       400                      410          420

     460       470          480            490           500       
pF1KE2 PFPAPVGPFDAAPAQVAVFL---P-P----PHMQPPFVPA--YP-GLGYP-PMPRVPVVG
       : :  .    :.: :  .::   : :    : .:: ::::  :: . :.: : : :::::
NP_001 PPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVG
              430       440       450       460       470       480

       510       520          530                     540       550
pF1KE2 ITPSQMVANAFCSAAQLQ---PQPATLLGKAGAFP--------------PPAIPSAPGSQ
       :::::::::.: .:.. :   :. .  : .  .::              :::     :: 
NP_001 ITPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPA-QHLNGSA
              490       500       510       520       530          

                   560       570       580          590       600  
pF1KE2 A-----RPRPNGAPWPPEPAPAPAPELDPFEAQWAALEGKA---TVEKPSNPFSGDLQKT
       :       :  .:    : .:. .  .:::::::::::.:.   :  .:.::::.:::::
NP_001 AFNGVDDGRLASADRHTE-VPTGTCPVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKT
     540       550        560       570       580       590        

            
pF1KE2 FEIEL
       :::::
NP_001 FEIEL
      600   

>>NP_001005743 (OMIM: 603728) protein numb homolog isofo  (651 aa)
 initn: 1930 init1: 777 opt: 1263  Z-score: 554.3  bits: 112.7 E(85289): 3.9e-24
Smith-Waterman score: 1818; 53.3% identity (68.1% similar) in 602 aa overlap (42-549:1-573)

              20        30        40        50        60        70 
pF1KE2 RRPERHLPPAPCGAPGPPETCRTEPDGAGTMNKLRQSLRRRKPAYVPEASRPHQWQADED
                                     :::::::.::.: .::::::::::::.::.
NP_001                               MNKLRQSFRRKKDVYVPEASRPHQWQTDEE
                                             10        20        30

              80        90       100                  110       120
pF1KE2 AVRKGTCSFPVRYLGHVEVEESRGMHVCEDAVKKLKA-----------MGRKSVKSVLWV
       .:: : :::::.:::::::.::::::.::::::.:::            :.:.::.::::
NP_001 GVRTGKCSFPVKYLGHVEVDESRGMHICEDAVKRLKAERKFFKGFFGKTGKKAVKAVLWV
               40        50        60        70        80        90

              130       140       150       160       170       180
pF1KE2 SADGLRVVDDKTKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALKDS
       :::::::::.:::::.::::::::::::::::.:.:::::::::::::::::::.:.::.
NP_001 SADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTRRWICHCFMAVKDT
              100       110       120       130       140       150

              190       200       210       220       230          
pF1KE2 GERLSHAVGCAFAACLERKQRREKECGVTAAFDASRTSFAREGSFRLSGGGRPAEREA--
       ::::::::::::::::::::.:::::::::.::::::.:.::::::.. . . ::::   
NP_001 GERLSHAVGCAFAACLERKQKREKECGVTATFDASRTTFTREGSFRVTTATEQAEREEIM
              160       170       180       190       200       210

         240          250       260       270       280       290  
pF1KE2 ---PDKKKAEA---AAAPTVAPGPAQPGHVSPTPATTSPGEKGEAGTPVAAGTTAAAIPR
           : ::::.   ... .:::: . :.  :::  :..   . : ..:        ::::
NP_001 KQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNP-------HAIPR
              220       230       240       250              260   

            300       310       320       330       340       350  
pF1KE2 RHAPLEQLVRQGSFRGFPALSQKNSPFKRQLSLRLNELPSTLQRRTDFQVKGTVPEMEPP
       ::::.:::.:::::::::::::: ::::::::::.::::::.::.::: .:..:::.:  
NP_001 RHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINELPSTMQRKTDFPIKNAVPEVE--
           270       280       290       300       310       320   

            360       370                    380                   
pF1KE2 GAGDSDSINALCTQISSSFAS-----AGAP--------APGPP----------------P
         :...::..::.::...:..     ..::        ::  :                :
NP_001 --GEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQANGTDSAFHVLAKP
               330       340       350       360       370         

                                         390        400       410  
pF1KE2 ATTGT------------------------------SAWGEPS-VPPAAAFQPGHKRTPSE
       : :.                               . ::. : .   . :: ::.:::::
NP_001 AHTALAPVAMPVRETNPWAHAPDAANKEIAATCSGTEWGQSSGAASPGLFQAGHRRTPSE
     380       390       400       410       420       430         

            420       430       440       450       460       470  
pF1KE2 AERWLEEVSQVAKAQQQQQQQQQQQQQQQQQQAASVAPVPTMPPALQPFPAPVGPFDAAP
       :.:::::::. ..::: :               ::.::   . :.::: :  .    :.:
NP_001 ADRWLEEVSKSVRAQQPQ---------------ASAAP---LQPVLQPPPPTAISQPASP
     440       450                      460          470       480 

               480            490           500       510       520
pF1KE2 AQVAVFL---P-P----PHMQPPFVPA--YP-GLGYP-PMPRVPVVGITPSQMVANAFCS
        :  .::   : :    : .:: ::::  :: . :.: : : ::::::::::::::.: .
NP_001 FQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGT
             490       500       510       520       530       540 

                 530       540       550       560       570       
pF1KE2 AAQLQ---PQPATLLGKAGAFPPPAIPSAPGSQARPRPNGAPWPPEPAPAPAPELDPFEA
       :.. :   :. .  : .  .::     ::  :                            
NP_001 AGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASAD
             550       560       570       580       590       600 

       580       590       600                           
pF1KE2 QWAALEGKATVEKPSNPFSGDLQKTFEIEL                    
                                                         
NP_001 RHTEVPTGTCPVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL
             610       620       630       640       650 




607 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 05:01:16 2016 done: Sun Nov  6 05:01:18 2016
 Total Scan time: 13.290 Total Display time:  0.090

Function used was FASTA [36.3.4 Apr, 2011]
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